RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 CLDN8P56748 225 aa11.63□□□□□ -0.55
CDX2-202ENST00000548877 DEFA6Q01524 100 aa11.63□□□□□ -0.55
CDX2-202ENST00000548877 EPS8Q12929 822 aa11.63□□□□□ -0.55
CDX2-202ENST00000548877 FOXL1Q12952 345 aa11.63□□□□□ -0.55
CDX2-202ENST00000548877 DAG1Q14118 895 aa11.63□□□□□ -0.55
CDX2-202ENST00000548877 OR7A5Q15622 319 aa11.63□□□□□ -0.55
CDX2-202ENST00000548877 MSMPQ1L6U9 139 aa11.63□□□□□ -0.55
CDX2-202ENST00000548877 DPY19L1Q2PZI1 675 aa11.63□□□□□ -0.55
CDX2-202ENST00000548877 CLECL1Q8IZS7 167 aa11.63□□□□□ -0.55
CDX2-202ENST00000548877 CLEC4FQ8N1N0 589 aa11.63□□□□□ -0.55
CDX2-202ENST00000548877 LRRC17Q8N6Y2 441 aa11.63□□□□□ -0.55
CDX2-202ENST00000548877 XAGE5Q8WWM1 108 aa11.63□□□□□ -0.55
CDX2-202ENST00000548877 C1orf50Q9BV19 199 aa11.63□□□□□ -0.55
CDX2-202ENST00000548877 TPK1Q9H3S4 243 aa11.63□□□□□ -0.55
CDX2-202ENST00000548877 NOX3Q9HBY0 568 aa11.63□□□□□ -0.55
CDX2-202ENST00000548877 ESM1Q9NQ30 184 aa11.63□□□□□ -0.55
CDX2-202ENST00000548877 RCE1Q9Y256 329 aa11.63□□□□□ -0.55
CDX2-202ENST00000548877 RASD1Q9Y272 281 aa11.63□□□□□ -0.55
CDX2-202ENST00000548877 PCDHGB1Q9Y5G3 927 aa11.63□□□□□ -0.55
CDX2-202ENST00000548877 ZNF503-AS2A6NEH8 195 aa11.62□□□□□ -0.55
CDX2-202ENST00000548877 AGAP5A6NIR3 686 aa11.62□□□□□ -0.55
CDX2-202ENST00000548877 M0R233 179 aa11.62□□□□□ -0.55
CDX2-202ENST00000548877 FBP2O00757 339 aa11.62□□□□□ -0.55
CDX2-202ENST00000548877 FZD7O75084 574 aa11.62□□□□□ -0.55
CDX2-202ENST00000548877 NPIPB7O75200 414 aa11.62□□□□□ -0.55
CDX2-202ENST00000548877 ENTPD5O75356 428 aa11.62□□□□□ -0.55
CDX2-202ENST00000548877 RP2O75695 350 aa11.62□□□□□ -0.55
CDX2-202ENST00000548877 RGS9O75916 674 aaPredicted RBP11.62□□□□□ -0.55
CDX2-202ENST00000548877 HPXP02790 462 aa11.62□□□□□ -0.55
CDX2-202ENST00000548877 GSNP06396 782 aa11.62□□□□□ -0.55
CDX2-202ENST00000548877 HKR1P10072 659 aa11.62□□□□□ -0.55
CDX2-202ENST00000548877 ANPEPP15144 967 aa11.62□□□□□ -0.55
CDX2-202ENST00000548877 RPS4Y1P22090 263 aaKnown RBP11.62□□□□□ -0.55
CDX2-202ENST00000548877 MYBPC1Q00872 1141 aa11.62□□□□□ -0.55
CDX2-202ENST00000548877 ROR2Q01974 943 aaKnown RBP11.62□□□□□ -0.55
CDX2-202ENST00000548877 TRAP1Q12931 704 aaKnown RBP11.62□□□□□ -0.55
CDX2-202ENST00000548877 SNTB2Q13425 540 aaKnown RBP11.62□□□□□ -0.55
CDX2-202ENST00000548877 SAXO2Q658L1 398 aa11.62□□□□□ -0.55
CDX2-202ENST00000548877 ZFP1Q6P2D0 407 aa11.62□□□□□ -0.55
CDX2-202ENST00000548877 FAHD2BQ6P2I3 314 aaPredicted RBP11.62□□□□□ -0.55
CDX2-202ENST00000548877 NIPAL3Q6P499 406 aa11.62□□□□□ -0.55
CDX2-202ENST00000548877 MSANTD1Q6ZTZ1 278 aa11.62□□□□□ -0.55
CDX2-202ENST00000548877 GPAT4Q86UL3 456 aa11.62□□□□□ -0.55
CDX2-202ENST00000548877 DPP10Q8N608 796 aa11.62□□□□□ -0.55
CDX2-202ENST00000548877 OR8J2Q8NGG1 315 aa11.62□□□□□ -0.55
CDX2-202ENST00000548877 OR9I1Q8NGQ6 314 aa11.62□□□□□ -0.55
CDX2-202ENST00000548877 RAB8BQ92930 207 aa11.62□□□□□ -0.55
CDX2-202ENST00000548877 FAHD2AQ96GK7 314 aa11.62□□□□□ -0.55
CDX2-202ENST00000548877 TMPRSS13Q9BYE2 586 aa11.62□□□□□ -0.55
CDX2-202ENST00000548877 MRPL37Q9BZE1 423 aaKnown RBP11.62□□□□□ -0.55
CDX2-202ENST00000548877 TRIM15Q9C019 465 aa11.62□□□□□ -0.55
CDX2-202ENST00000548877 MUC13Q9H3R2 512 aa11.62□□□□□ -0.55
CDX2-202ENST00000548877 SLC52A3Q9NQ40 469 aa11.62□□□□□ -0.55
CDX2-202ENST00000548877 B3GNT2Q9NY97 397 aa11.62□□□□□ -0.55
CDX2-202ENST00000548877 TREM2Q9NZC2 230 aa11.62□□□□□ -0.55
CDX2-202ENST00000548877 ADA2Q9NZK5 511 aa11.62□□□□□ -0.55
CDX2-202ENST00000548877 STX18Q9P2W9 335 aaKnown RBP11.62□□□□□ -0.55
CDX2-202ENST00000548877 POMPQ9Y244 141 aa11.62□□□□□ -0.55
CDX2-202ENST00000548877 VWFP04275 2813 aa11.62□□□□□ -0.55
CDX2-202ENST00000548877 LOC105371242A0A075B767 164 aa11.61□□□□□ -0.55
CDX2-202ENST00000548877 J3QLI3 93 aa11.61□□□□□ -0.55
CDX2-202ENST00000548877 FSHBP01225 129 aa11.61□□□□□ -0.55
CDX2-202ENST00000548877 G6PDP11413 515 aa11.61□□□□□ -0.55
CDX2-202ENST00000548877 UQCRBP14927 111 aa11.61□□□□□ -0.55
CDX2-202ENST00000548877 UQCRC2P22695 453 aa11.61□□□□□ -0.55
CDX2-202ENST00000548877 GLRXP35754 106 aa11.61□□□□□ -0.55
CDX2-202ENST00000548877 NME5P56597 212 aa11.61□□□□□ -0.55
CDX2-202ENST00000548877 UFM1P61960 85 aa11.61□□□□□ -0.55
CDX2-202ENST00000548877 UBA52P62987 128 aaKnown RBP11.61□□□□□ -0.55
CDX2-202ENST00000548877 ARF1P84077 181 aaKnown RBP11.61□□□□□ -0.55
CDX2-202ENST00000548877 NFYCQ13952 458 aa11.61□□□□□ -0.55
CDX2-202ENST00000548877 OCLNQ16625 522 aa11.61□□□□□ -0.55
CDX2-202ENST00000548877 OR4F3Q6IEY1 312 aa11.61□□□□□ -0.55
CDX2-202ENST00000548877 C8orf82Q6P1X6 216 aaPredicted RBP11.61□□□□□ -0.55
CDX2-202ENST00000548877 TNFAIP8L2Q6P589 184 aaPredicted RBP11.61□□□□□ -0.55
CDX2-202ENST00000548877 TREML4Q6UXN2 200 aa11.61□□□□□ -0.55
CDX2-202ENST00000548877 THSD4Q6ZMP0 1018 aa11.61□□□□□ -0.55
CDX2-202ENST00000548877 YIPF5Q969M3 257 aa11.61□□□□□ -0.55
CDX2-202ENST00000548877 LRRC58Q96CX6 371 aa11.61□□□□□ -0.55
CDX2-202ENST00000548877 ASB9Q96DX5 294 aa11.61□□□□□ -0.55
CDX2-202ENST00000548877 NEURL3Q96EH8 262 aa11.61□□□□□ -0.55
CDX2-202ENST00000548877 CLPTM1LQ96KA5 538 aa11.61□□□□□ -0.55
CDX2-202ENST00000548877 ZNF75AQ96N20 296 aa11.61□□□□□ -0.55
CDX2-202ENST00000548877 TRNT1Q96Q11 434 aaKnown RBP11.61□□□□□ -0.55
CDX2-202ENST00000548877 SH3GL1Q99961 368 aa11.61□□□□□ -0.55
CDX2-202ENST00000548877 ZNF416Q9BWM5 594 aa11.61□□□□□ -0.55
CDX2-202ENST00000548877 SLC38A1Q9H2H9 487 aa11.61□□□□□ -0.55
CDX2-202ENST00000548877 RMND5AQ9H871 391 aa11.61□□□□□ -0.55
CDX2-202ENST00000548877 LPAR2Q9HBW0 351 aa11.61□□□□□ -0.55
CDX2-202ENST00000548877 ZNF275Q9NSD4 429 aaPredicted RBP11.61□□□□□ -0.55
CDX2-202ENST00000548877 A8MVM7 634 aa11.6□□□□□ -0.55
CDX2-202ENST00000548877 FTCDNL1E5RQL4 147 aa11.6□□□□□ -0.55
CDX2-202ENST00000548877 FRS3O43559 492 aa11.6□□□□□ -0.55
CDX2-202ENST00000548877 TFPTP0C1Z6 253 aa11.6□□□□□ -0.55
CDX2-202ENST00000548877 ZNF35P13682 527 aa11.6□□□□□ -0.55
CDX2-202ENST00000548877 CXCR1P25024 350 aa11.6□□□□□ -0.55
CDX2-202ENST00000548877 BNIP2Q12982 314 aa11.6□□□□□ -0.55
CDX2-202ENST00000548877 FLOT2Q14254 428 aa11.6□□□□□ -0.55
CDX2-202ENST00000548877 PGS1Q32NB8 556 aa11.6□□□□□ -0.55
CDX2-202ENST00000548877 KRT80Q6KB66 452 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms