RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 SLC29A1Q99808 456 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 SYT15Q9BQS2 421 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 OCR1Q9BZK8 76 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 TM6SF2Q9BZW4 377 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 AMBNQ9NP70 447 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 MYOZ2Q9NPC6 264 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 TIGARQ9NQ88 270 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 ZC4H2Q9NQZ6 224 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 SAMSN1Q9NSI8 373 aaKnown RBP3.44□□□□□ -1.86
SCAF11-210ENST00000547654 PLCXD1Q9NUJ7 323 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 THUMPD1Q9NXG2 353 aaKnown RBP3.44□□□□□ -1.86
SCAF11-210ENST00000547654 FLVCR2Q9UPI3 526 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 ZFYVE9O95405 1425 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 MROH7-TTC4A0A0A0MT08 1334 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 MAP3K19Q56UN5 1328 aa3.44□□□□□ -1.86
SCAF11-210ENST00000547654 C1orf167Q5SNV9 1468 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 RPRD2Q5VT52 1461 aaKnown RBP3.43□□□□□ -1.86
SCAF11-210ENST00000547654 WNK3Q9BYP7 1800 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 IGHV4-30-2A0A087WSY4 118 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 MEIOCA2RUB1 952 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 E9PLD3 99 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 K7EQG2 157 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 NDUFAB1O14561 156 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 CHST1O43916 411 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 AIREO43918 545 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 CLPXO76031 633 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 OR7A10O76100 309 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 LYPD3O95274 346 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 CLTAP09496 248 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 ZNF853P0CG23 659 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 UMPSP11172 480 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 HOXB8P17481 243 aaPredicted RBP3.43□□□□□ -1.86
SCAF11-210ENST00000547654 UGT1A4P22310 534 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 CALCRP30988 508 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 FOXN2P32314 431 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 TMED10P49755 219 aaKnown RBP3.43□□□□□ -1.86
SCAF11-210ENST00000547654 ARHGDIBP52566 201 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 HMGCS2P54868 508 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 MAP3K7CLP57077 242 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 SELENBP1Q13228 472 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 SLC10A1Q14973 349 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 CYTH1Q15438 398 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 DGUOKQ16854 277 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 MICAQ29983 383 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 ISXQ2M1V0 245 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 HSDL1Q3SXM5 330 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 MOGAT2Q3SYC2 334 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 PPM1LQ5SGD2 360 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 LY6G6FQ5SQ64 297 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 ADAMTSL4-AS1Q5T5F5 129 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 ZNF57Q68EA5 555 aaPredicted RBP3.43□□□□□ -1.86
SCAF11-210ENST00000547654 DEGS2Q6QHC5 323 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 GDPGP1Q6ZNW5 385 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 NOTCH2NLQ7Z3S9 236 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 SPATA24Q86W54 205 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 ACOT4Q8N9L9 421 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 AQP11Q8NBQ7 271 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 INO80EQ8NBZ0 244 aaPredicted RBP3.43□□□□□ -1.86
SCAF11-210ENST00000547654 CATSPER1Q8NEC5 780 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 ZPLD1Q8TCW7 415 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 PIH1D2Q8WWB5 315 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.43□□□□□ -1.86
SCAF11-210ENST00000547654 LITAFQ99732 161 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 KCNS3Q9BQ31 491 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 HCAR1Q9BXC0 346 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 BARHL1Q9BZE3 327 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 RACGAP1Q9H0H5 632 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 PARLQ9H300 379 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 TREM1Q9NP99 234 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 STOX2Q9P2F5 926 aaPredicted RBP3.43□□□□□ -1.86
SCAF11-210ENST00000547654 SPATA2Q9UM82 520 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 RNF24Q9Y225 148 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 MRPS28Q9Y2Q9 187 aaKnown RBP3.43□□□□□ -1.86
SCAF11-210ENST00000547654 NOSIPQ9Y314 301 aaKnown RBP3.43□□□□□ -1.86
SCAF11-210ENST00000547654 KNDC1Q76NI1 1749 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 PARP4Q9UKK3 1724 aaKnown RBP3.43□□□□□ -1.86
SCAF11-210ENST00000547654 ADAMTS13Q76LX8 1427 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 ADGRL3Q9HAR2 1447 aa3.43□□□□□ -1.86
SCAF11-210ENST00000547654 COL14A1Q05707 1796 aaKnown RBP3.43□□□□□ -1.86
SCAF11-210ENST00000547654 ARHGEF5Q12774 1597 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 MBD5Q9P267 1494 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 THSD7BQ9C0I4 1608 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 MUC3AQ02505 3323 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 KCNE1BA0A087WTH5 132 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 NSG1A0A0A6YYJ2 146 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 TRBV9A0A0B4J1U6 114 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 LOC100131303A0A0U1RQF7 123 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 SMIM28A0A1B0GU29 152 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 TMEM120BA0PK00 339 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 HSD17B6O14756 317 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 KDELR3O43731 214 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 HSBP1O75506 76 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 CCNB2O95067 398 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 C1orf105O95561 183 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 C2P06681 752 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 SERPINE2P07093 398 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 UBTFL1P0CB47 393 aaPredicted RBP3.42□□□□□ -1.86
SCAF11-210ENST00000547654 DPEP1P16444 411 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 GNB3P16520 340 aa3.42□□□□□ -1.86
SCAF11-210ENST00000547654 OXTRP30559 389 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms