RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 FCMRO60667 390 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 SERPINA2P20848 420 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 MECP2P51608 486 aaKnown RBP11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 TRMT12Q53H54 448 aaKnown RBP11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 LIPNQ5VXI9 398 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 ESPNLQ6ZVH7 1005 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 RNF128Q8TEB7 428 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 LRFN5Q96NI6 719 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 SELENOIQ9C0D9 397 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 OR10A2Q9H208 303 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 FAM212BQ9NTI7 297 aaPredicted RBP11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 CDK5RAP2Q96SN8 1893 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 SUSD5O60279 629 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 CNOT4O95628 575 aaKnown RBP11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 FGF9P31371 208 aaPredicted RBP11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 TRHRP34981 398 aaPredicted RBP11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 IDH3GP51553 393 aaPredicted RBP11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 AFF3P51826 1226 aaKnown RBP11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 DUSP8Q13202 625 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 CMTM4Q8IZR5 234 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 PLPP7Q8NBV4 271 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 APH1BQ8WW43 257 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 SHDQ96IW2 340 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 ULBP3Q9BZM4 244 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 SPNS1Q9H2V7 528 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 PLEK2Q9NYT0 353 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 CA5BQ9Y2D0 317 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 TUBAL3A6NHL2 446 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 HIDE1A8MVS5 230 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 D6RAR5 112 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 H3BNC9 293 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 SEC14L5O43304 696 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 IGHG1P01857 330 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 NME2P22392 152 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 RAB5CP51148 216 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 HCCSP53701 268 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 MAT1AQ00266 395 aaKnown RBP11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 DPTQ07507 201 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 YOD1Q5VVQ6 348 aaPredicted RBP11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 TEX261Q6UWH6 196 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 SYT9Q86SS6 491 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 OR13C5Q8NGS8 318 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 OR1S1Q8NH92 325 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 KCNG3Q8TAE7 436 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 SLAMF9Q96A28 289 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 SMIM19Q96E16 107 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 ISG20L2Q9H9L3 353 aaKnown RBP11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 FLVCR2Q9UPI3 526 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 EMC9Q9Y3B6 208 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 U3KQ87 197 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 SULT2B1O00204 365 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 GPR171O14626 319 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 CSNK1A1P48729 337 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 POLR2HP52434 150 aaKnown RBP11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 EBPQ15125 230 aaKnown RBP11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 FAM78AQ5JUQ0 283 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 SLC22A24Q8N4F4 322 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 NKAIN3Q8N8D7 197 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 HHIPL1Q96JK4 782 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 ZBP1Q9H171 429 aa11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 ZMAT3Q9HA38 289 aaKnown RBP11.25□□□□□ -0.61
NPC1L1-204ENST00000546276 KCNE1BA0A087WTH5 132 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 RPS10-NUDT3A0A1W2PQS6 291 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 LPLP06858 475 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 POU3F3P20264 500 aaPredicted RBP11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 RPS10P46783 165 aaKnown RBP11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 DIO1P49895 249 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 ERVFC1P60507 584 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 CDK5R1Q15078 307 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 PAPD4Q6PIY7 484 aaKnown RBP11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 MED25Q71SY5 747 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 ZNF578Q96N58 590 aaPredicted RBP11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 SLC25A31Q9H0C2 315 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 C1orf198Q9H425 327 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 LYRM4Q9HD34 91 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 C1orf123Q9NWV4 160 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 RAB22AQ9UL26 194 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 A0A0B4J203 849 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 IFITM5A6NNB3 132 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 HRO43593 1189 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 SCO1O75880 301 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 SLC34A2O95436 690 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 SERPINE2P07093 398 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 ADRB1P08588 477 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 HIST1H1CP16403 213 aaKnown RBP11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 MRPL49Q13405 166 aaKnown RBP11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 CNN3Q15417 329 aaKnown RBP11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 TMEM164Q5U3C3 297 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 C5orf46Q6UWT4 87 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 TMEM200AQ86VY9 491 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 ZNF683Q8IZ20 524 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 OR51Q1Q8NH59 317 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 NKX6-2Q9C056 277 aaPredicted RBP11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 CHRDQ9H2X0 955 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 SMCO3A2RU48 225 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 SNRPGP15A8MWD9 76 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 STK17BO94768 372 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 EPHA1P21709 976 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 TM4SF4P48230 202 aa11.24□□□□□ -0.61
NPC1L1-204ENST00000546276 AANATQ16613 207 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms