RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 FRRS1LQ9P0K9 344 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 UPB1Q9UBR1 384 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 HIF3AQ9Y2N7 669 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 YBX2Q9Y2T7 364 aaKnown RBP7.97□□□□□ -1.13
TDP1-204ENST00000545686 LAMA2P24043 3122 aaKnown RBP7.97□□□□□ -1.13
TDP1-204ENST00000545686 A0A1B0GVT2 93 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 RFPL4AA6NLU0 287 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 OR4C45A6NMZ5 311 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 RFPL4AL1F8VTS6 287 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 H3BUI4 141 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 PHYHO14832 338 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 OR10H2O60403 315 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 CDC40O60508 579 aaKnown RBP eCLIP7.97□□□□□ -1.13
TDP1-204ENST00000545686 CTAG2O75638 210 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 TXNDC12O95881 172 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 HPP00738 406 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 CD14P08571 375 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 OR8G3PP0DMU2 310 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 PTHLHP12272 177 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 AGTR1P30556 359 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 ACTBP60709 375 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 ACTG1P63261 375 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 RASGEF1BQ0VAM2 473 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 EIF2B5Q13144 721 aaKnown RBP7.97□□□□□ -1.13
TDP1-204ENST00000545686 FAM53BQ14153 422 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 EMC4Q5J8M3 183 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 OR7E24Q6IFN5 339 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 PRSS41Q7RTY9 318 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 FAM122BQ7Z309 247 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 MUC20Q8N307 709 aaPredicted RBP7.97□□□□□ -1.13
TDP1-204ENST00000545686 ZNF454Q8N9F8 522 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 GPR148Q8TDV2 347 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 OIT3Q8WWZ8 545 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 ASB12Q8WXK4 309 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 WDR89Q96FK6 387 aaPredicted RBP7.97□□□□□ -1.13
TDP1-204ENST00000545686 Q96M85 177 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 VSTM2LQ96N03 204 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 CRISPLD2Q9H0B8 497 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 MYOZ1Q9NP98 299 aaPredicted RBP7.97□□□□□ -1.13
TDP1-204ENST00000545686 IL23AQ9NPF7 189 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 CDV3Q9UKY7 258 aaKnown RBP7.97□□□□□ -1.13
TDP1-204ENST00000545686 DOCK8Q8NF50 2099 aa7.97□□□□□ -1.13
TDP1-204ENST00000545686 TMEM72A0PK05 275 aa7.96□□□□□ -1.13
TDP1-204ENST00000545686 A6NCN8 305 aa7.96□□□□□ -1.13
TDP1-204ENST00000545686 POM121CA8CG34 1229 aa7.96□□□□□ -1.13
TDP1-204ENST00000545686 SULT1C2O00338 296 aa7.96□□□□□ -1.13
TDP1-204ENST00000545686 SRPX2O60687 465 aaPredicted RBP7.96□□□□□ -1.13
TDP1-204ENST00000545686 PRAMEF2O60811 474 aa7.96□□□□□ -1.13
TDP1-204ENST00000545686 PMS2P2O95744 297 aa7.96□□□□□ -1.13
TDP1-204ENST00000545686 RLN1P04808 185 aa7.96□□□□□ -1.13
TDP1-204ENST00000545686 APODP05090 189 aa7.96□□□□□ -1.13
TDP1-204ENST00000545686 TMIGD3P0DMS9 266 aaPredicted RBP7.96□□□□□ -1.13
TDP1-204ENST00000545686 MGMTP16455 207 aa7.96□□□□□ -1.13
TDP1-204ENST00000545686 S1PR1P21453 382 aa7.96□□□□□ -1.13
TDP1-204ENST00000545686 GRPRP30550 384 aa7.96□□□□□ -1.13
TDP1-204ENST00000545686 SDHAP31040 664 aa7.96□□□□□ -1.13
TDP1-204ENST00000545686 GRK6P43250 576 aa7.96□□□□□ -1.13
TDP1-204ENST00000545686 MAGEB1P43366 347 aa7.96□□□□□ -1.13
TDP1-204ENST00000545686 RUNX3Q13761 415 aa7.96□□□□□ -1.13
TDP1-204ENST00000545686 BAHD1Q8TBE0 780 aaPredicted RBP7.96□□□□□ -1.13
TDP1-204ENST00000545686 MCHR2Q969V1 340 aa7.96□□□□□ -1.13
TDP1-204ENST00000545686 TRIM43Q96BQ3 446 aaPredicted RBP7.96□□□□□ -1.13
TDP1-204ENST00000545686 C3orf49Q96BT1 292 aa7.96□□□□□ -1.13
TDP1-204ENST00000545686 SIPA1Q96FS4 1042 aa7.96□□□□□ -1.13
TDP1-204ENST00000545686 ADAD1Q96M93 576 aaKnown RBP7.96□□□□□ -1.13
TDP1-204ENST00000545686 MFFQ9GZY8 342 aa7.96□□□□□ -1.13
TDP1-204ENST00000545686 SLC6A15Q9H2J7 730 aa7.96□□□□□ -1.13
TDP1-204ENST00000545686 KLHDC2Q9Y2U9 406 aa7.96□□□□□ -1.13
TDP1-204ENST00000545686 RWDD3Q9Y3V2 267 aa7.96□□□□□ -1.13
TDP1-204ENST00000545686 TMEM14AQ9Y6G1 99 aa7.96□□□□□ -1.13
TDP1-204ENST00000545686 ATG2BQ96BY7 2078 aa7.96□□□□□ -1.14
TDP1-204ENST00000545686 A0A0D9SG52 128 aa7.96□□□□□ -1.14
TDP1-204ENST00000545686 TMEM272A0A1B0GTI8 110 aa7.96□□□□□ -1.14
TDP1-204ENST00000545686 FAM221BA6H8Z2 402 aa7.96□□□□□ -1.14
TDP1-204ENST00000545686 SERINC4A6NH21 518 aa7.96□□□□□ -1.14
TDP1-204ENST00000545686 PSMD9O00233 223 aa7.96□□□□□ -1.14
TDP1-204ENST00000545686 FOXS1O43638 330 aa7.96□□□□□ -1.14
TDP1-204ENST00000545686 NDUFA2O43678 99 aa7.96□□□□□ -1.14
TDP1-204ENST00000545686 RPP14O95059 124 aaKnown RBP7.96□□□□□ -1.14
TDP1-204ENST00000545686 CSTAP01040 98 aa7.96□□□□□ -1.14
TDP1-204ENST00000545686 ITGB2P05107 769 aa7.96□□□□□ -1.14
TDP1-204ENST00000545686 PNMTP11086 282 aa7.96□□□□□ -1.14
TDP1-204ENST00000545686 GTF2F2P13984 249 aa7.96□□□□□ -1.14
TDP1-204ENST00000545686 WASP42768 502 aa7.96□□□□□ -1.14
TDP1-204ENST00000545686 CDKN2AP42771 156 aaKnown RBP7.96□□□□□ -1.14
TDP1-204ENST00000545686 SOX2P48431 317 aa7.96□□□□□ -1.14
TDP1-204ENST00000545686 ADPRHP54922 357 aa7.96□□□□□ -1.14
TDP1-204ENST00000545686 FGL1Q08830 312 aa7.96□□□□□ -1.14
TDP1-204ENST00000545686 ZNF345Q14585 488 aa7.96□□□□□ -1.14
TDP1-204ENST00000545686 NFATC4Q14934 902 aa7.96□□□□□ -1.14
TDP1-204ENST00000545686 C2orf68Q2NKX9 166 aa7.96□□□□□ -1.14
TDP1-204ENST00000545686 DEFB115Q30KQ5 88 aa7.96□□□□□ -1.14
TDP1-204ENST00000545686 LPCAT3Q6P1A2 487 aa7.96□□□□□ -1.14
TDP1-204ENST00000545686 FDX2Q6P4F2 183 aa7.96□□□□□ -1.14
TDP1-204ENST00000545686 MAMSTRQ6ZN01 415 aa7.96□□□□□ -1.14
TDP1-204ENST00000545686 CFAP77Q6ZQR2 320 aa7.96□□□□□ -1.14
TDP1-204ENST00000545686 MCATQ8IVS2 390 aaKnown RBP7.96□□□□□ -1.14
TDP1-204ENST00000545686 TMEFF1Q8IYR6 380 aa7.96□□□□□ -1.14
TDP1-204ENST00000545686 STPG2Q8N412 459 aa7.96□□□□□ -1.14
TDP1-204ENST00000545686 LRRC75AQ8NAA5 344 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms