RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 IKZF5Q9H5V7 419 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 NT5DC2Q9H857 520 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 PRELID1Q9Y255 219 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 KLK4Q9Y5K2 254 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 NPFFR2Q9Y5X5 522 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 A0A087WUU8 490 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 PRAMEF4O60810 478 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 TK1P04183 234 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 GABREP78334 506 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 KIAA0907Q7Z7F0 614 aaPredicted RBP11.78□□□□□ -0.52
CHD4-211ENST00000544484 TSLPQ969D9 159 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 PIGTQ969N2 578 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 ACER3Q9NUN7 267 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 IDSB3KWA1 339 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 TIMM8AO60220 97 aaPredicted RBP11.78□□□□□ -0.52
CHD4-211ENST00000544484 HCCSP53701 268 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 RRADP55042 308 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 ALKBH1Q13686 389 aaKnown RBP11.78□□□□□ -0.52
CHD4-211ENST00000544484 BATF2Q8N1L9 274 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 OR51D1Q8NGF3 324 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 S100PBPQ96BU1 408 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 RANGRFQ9HD47 186 aaPredicted RBP11.78□□□□□ -0.52
CHD4-211ENST00000544484 C19orf53Q9UNZ5 99 aaPredicted RBP11.78□□□□□ -0.52
CHD4-211ENST00000544484 SURF4O15260 269 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 SHOXO15266 292 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 NID1P14543 1247 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 ARRB2P32121 409 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 SOWAHCQ53LP3 525 aaPredicted RBP11.78□□□□□ -0.52
CHD4-211ENST00000544484 IDO2Q6ZQW0 420 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 TMEM185AQ8NFB2 350 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 WWTR1Q9GZV5 400 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 ZNF286AQ9HBT8 521 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 DUSP22Q9NRW4 184 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 TRAPPC2LQ9UL33 140 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 CDK5RAP2Q96SN8 1893 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 IFI44Q8TCB0 444 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 SLAMF9Q96A28 289 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 SEC22AQ96IW7 307 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 THOC3Q96J01 351 aaKnown RBP11.78□□□□□ -0.52
CHD4-211ENST00000544484 STACQ99469 402 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 LOXHD1Q8IVV2 1947 aa11.78□□□□□ -0.52
CHD4-211ENST00000544484 OR2W5A6NFC9 320 aa11.77□□□□□ -0.52
CHD4-211ENST00000544484 TPPPO94811 219 aa11.77□□□□□ -0.52
CHD4-211ENST00000544484 SORDQ00796 357 aa11.77□□□□□ -0.52
CHD4-211ENST00000544484 YRDCQ86U90 279 aaKnown RBP11.77□□□□□ -0.52
CHD4-211ENST00000544484 ARL11Q969Q4 196 aa11.77□□□□□ -0.52
CHD4-211ENST00000544484 METTL17Q9H7H0 456 aaPredicted RBP11.77□□□□□ -0.52
CHD4-211ENST00000544484 PEX14O75381 377 aa11.77□□□□□ -0.52
CHD4-211ENST00000544484 GFERP55789 205 aa11.77□□□□□ -0.52
CHD4-211ENST00000544484 BHLHE23Q8NDY6 225 aa11.77□□□□□ -0.52
CHD4-211ENST00000544484 GOT1L1Q8NHS2 421 aaPredicted RBP11.77□□□□□ -0.52
CHD4-211ENST00000544484 DVL3Q92997 716 aaPredicted RBP11.77□□□□□ -0.52
CHD4-211ENST00000544484 TMEM184BQ9Y519 407 aaPredicted RBP11.77□□□□□ -0.52
CHD4-211ENST00000544484 CEBPZOSA8MTT3 80 aa11.77□□□□□ -0.53
CHD4-211ENST00000544484 M0R082 166 aa11.77□□□□□ -0.53
CHD4-211ENST00000544484 SEC14L2O76054 403 aa11.77□□□□□ -0.53
CHD4-211ENST00000544484 SLC2A10O95528 541 aa11.77□□□□□ -0.53
CHD4-211ENST00000544484 RBPJQ06330 500 aa11.77□□□□□ -0.53
CHD4-211ENST00000544484 FBXL6Q8N531 539 aa11.77□□□□□ -0.53
CHD4-211ENST00000544484 BAHD1Q8TBE0 780 aaPredicted RBP11.77□□□□□ -0.53
CHD4-211ENST00000544484 ANKRD19PQ9H560 264 aa11.77□□□□□ -0.53
CHD4-211ENST00000544484 KCND3Q9UK17 655 aa11.77□□□□□ -0.53
CHD4-211ENST00000544484 POM121CA8CG34 1229 aa11.77□□□□□ -0.53
CHD4-211ENST00000544484 SLC34A2O95436 690 aa11.77□□□□□ -0.53
CHD4-211ENST00000544484 CD79BP40259 229 aa11.77□□□□□ -0.53
CHD4-211ENST00000544484 EIF1P41567 113 aaKnown RBP11.77□□□□□ -0.53
CHD4-211ENST00000544484 GLYATL3Q5SZD4 288 aa11.77□□□□□ -0.53
CHD4-211ENST00000544484 PAQR8Q8TEZ7 354 aa11.77□□□□□ -0.53
CHD4-211ENST00000544484 GIMAP5Q96F15 307 aa11.77□□□□□ -0.53
CHD4-211ENST00000544484 SGPP1Q9BX95 441 aa11.77□□□□□ -0.53
CHD4-211ENST00000544484 SCGB2A1O75556 95 aa11.77□□□□□ -0.53
CHD4-211ENST00000544484 TPOP07202 933 aa11.77□□□□□ -0.53
CHD4-211ENST00000544484 MSR1P21757 451 aa11.77□□□□□ -0.53
CHD4-211ENST00000544484 CTGFP29279 349 aa11.77□□□□□ -0.53
CHD4-211ENST00000544484 RAB31Q13636 194 aa11.77□□□□□ -0.53
CHD4-211ENST00000544484 STEAP3Q658P3 488 aa11.77□□□□□ -0.53
CHD4-211ENST00000544484 ZNF529Q6P280 563 aa11.77□□□□□ -0.53
CHD4-211ENST00000544484 ZNF546Q86UE3 836 aa11.77□□□□□ -0.53
CHD4-211ENST00000544484 OR56B1Q8NGI3 324 aa11.77□□□□□ -0.53
CHD4-211ENST00000544484 STT3BQ8TCJ2 826 aa11.77□□□□□ -0.53
CHD4-211ENST00000544484 PPA2Q9H2U2 334 aa11.77□□□□□ -0.53
CHD4-211ENST00000544484 TMEM82A0PJX8 343 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 EIF1BO60739 113 aaKnown RBP11.76□□□□□ -0.53
CHD4-211ENST00000544484 ZNF254O75437 659 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 IFNA17P01571 189 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 SBK3P0C264 359 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 RAB6AP20340 208 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 H1FNTQ75WM6 255 aaPredicted RBP11.76□□□□□ -0.53
CHD4-211ENST00000544484 ZFAND1Q8TCF1 268 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 SECTM1Q8WVN6 248 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 C22orf15Q8WYQ4 148 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 SSX3Q99909 188 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 WASH6PQ9NQA3 447 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 MCRIP1C9JLW8 97 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 YKT6O15498 198 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 FBXO24O75426 580 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 HNF4GQ14541 408 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 ACSM5Q6NUN0 579 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 GRINAQ7Z429 371 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 BCORP1Q8N888 145 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms