RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 TMEM44Q2T9K0 475 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 TBC1D25Q3MII6 688 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 TMEM164Q5U3C3 297 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 TMPRSS11AQ6ZMR5 421 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 LINC00696Q6ZRV3 163 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 VASH1Q7L8A9 365 aaPredicted RBP12.29□□□□□ -0.44
HCFC2-202ENST00000544223 VASH2Q86V25 355 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 DTX3Q8N9I9 347 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 KBTBD8Q8NFY9 601 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 OR6N2Q8NGY6 317 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 OR52N1Q8NH53 320 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 SNX33Q8WV41 574 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 ST8SIA1Q92185 356 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 NXPE2Q96DL1 559 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 DDA1Q9BW61 102 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 DEPPQ9NTK1 212 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 ANKRD11Q6UB99 2663 aaPredicted RBP12.29□□□□□ -0.44
HCFC2-202ENST00000544223 ANKRD61A6NGH8 418 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 ZNF670-ZNF695F2Z2N8 137 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 TP53I11O14683 189 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 TRIM3O75382 744 aaPredicted RBP12.29□□□□□ -0.44
HCFC2-202ENST00000544223 GABRA5P31644 462 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 UGT2B10P36537 528 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 PUDPQ08623 228 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 ACER2Q5QJU3 275 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 RAET1LQ5VY80 246 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 CARD17Q5XLA6 110 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 SLC22A10Q63ZE4 541 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 YRDCQ86U90 279 aaKnown RBP12.29□□□□□ -0.44
HCFC2-202ENST00000544223 NR2C2APQ86WQ0 139 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 IL22RA1Q8N6P7 574 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 ARIH2OSQ8N7S6 290 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 OIT3Q8WWZ8 545 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 BCL7BQ9BQE9 202 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 C12orf10Q9HB07 376 aa12.29□□□□□ -0.44
HCFC2-202ENST00000544223 XKRYO14609 159 aa12.28□□□□□ -0.44
HCFC2-202ENST00000544223 SLC30A4O14863 429 aa12.28□□□□□ -0.44
HCFC2-202ENST00000544223 RAD1O60671 282 aa12.28□□□□□ -0.44
HCFC2-202ENST00000544223 GLCEO94923 617 aa12.28□□□□□ -0.44
HCFC2-202ENST00000544223 DPP4P27487 766 aa12.28□□□□□ -0.44
HCFC2-202ENST00000544223 GTF2E2P29084 291 aaKnown RBP12.28□□□□□ -0.44
HCFC2-202ENST00000544223 APOBEC1P41238 236 aaKnown RBP12.28□□□□□ -0.44
HCFC2-202ENST00000544223 RPL27P61353 136 aaKnown RBP12.28□□□□□ -0.44
HCFC2-202ENST00000544223 OPN5Q6U736 354 aa12.28□□□□□ -0.44
HCFC2-202ENST00000544223 PIP4P1Q86T03 277 aa12.28□□□□□ -0.44
HCFC2-202ENST00000544223 PLCZ1Q86YW0 608 aa12.28□□□□□ -0.44
HCFC2-202ENST00000544223 LAX1Q8IWV1 398 aa12.28□□□□□ -0.44
HCFC2-202ENST00000544223 NSMAFQ92636 917 aa12.28□□□□□ -0.44
HCFC2-202ENST00000544223 PLGRKTQ9HBL7 147 aa12.28□□□□□ -0.44
HCFC2-202ENST00000544223 KCNG2Q9UJ96 466 aa12.28□□□□□ -0.44
HCFC2-202ENST00000544223 LIPT2A6NK58 231 aa12.28□□□□□ -0.44
HCFC2-202ENST00000544223 MT-ND5P03915 603 aa12.28□□□□□ -0.44
HCFC2-202ENST00000544223 NANOS3P60323 173 aaKnown RBP12.28□□□□□ -0.44
HCFC2-202ENST00000544223 GABREP78334 506 aa12.28□□□□□ -0.44
HCFC2-202ENST00000544223 ZNF829Q3KNS6 432 aaPredicted RBP12.28□□□□□ -0.44
HCFC2-202ENST00000544223 TIMM50Q3ZCQ8 353 aa12.28□□□□□ -0.44
HCFC2-202ENST00000544223 ZMAT1Q5H9K5 638 aa12.28□□□□□ -0.44
HCFC2-202ENST00000544223 UBQLNLQ8IYU4 475 aa12.28□□□□□ -0.44
HCFC2-202ENST00000544223 THEM6Q8WUY1 208 aa12.28□□□□□ -0.44
HCFC2-202ENST00000544223 GHSRQ92847 366 aa12.28□□□□□ -0.44
HCFC2-202ENST00000544223 PPP1R14AQ96A00 147 aa12.28□□□□□ -0.44
HCFC2-202ENST00000544223 CCNL2Q96S94 520 aaPredicted RBP12.28□□□□□ -0.44
HCFC2-202ENST00000544223 STMN3Q9NZ72 180 aa12.28□□□□□ -0.44
HCFC2-202ENST00000544223 PRSS37A4D1T9 235 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 CLDN25C9JDP6 229 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 ZIC3O60481 467 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 OR2B6P58173 313 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 OR10A3P58181 314 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 TUBA1BP68363 451 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 CAMK2DQ13557 499 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 TUBA1AQ71U36 451 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 RDH10Q8IZV5 341 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 FADS6Q8N9I5 356 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 FAM83FQ8NEG4 500 aaPredicted RBP12.27□□□□□ -0.45
HCFC2-202ENST00000544223 ZNF519Q8TB69 540 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 DDIT4LQ96D03 193 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 SIGLEC12Q96PQ1 595 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 HAO2Q9NYQ3 351 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 PRR33A8MZF0 331 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 TNFRSF10AO00220 468 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 CASKO14936 926 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 MT-ATP6P00846 226 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 PRKAR1AP10644 381 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 ITGA3P26006 1051 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 HTR3AP46098 478 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 STARP49675 285 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 PSMD7P51665 324 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 SH3BGRP55822 239 aaPredicted RBP12.27□□□□□ -0.45
HCFC2-202ENST00000544223 CORO6Q6QEF8 472 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 H1FNTQ75WM6 255 aaPredicted RBP12.27□□□□□ -0.45
HCFC2-202ENST00000544223 TIGD4Q8IY51 512 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 OR1J4Q8NGS1 313 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 NEIL3Q8TAT5 605 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 STK35Q8TDR2 534 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 PAQR8Q8TEZ7 354 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 PGLYRP3Q96LB9 341 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 ADAD1Q96M93 576 aaKnown RBP12.27□□□□□ -0.45
HCFC2-202ENST00000544223 KCTD7Q96MP8 289 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 UCN2Q96RP3 112 aa12.27□□□□□ -0.45
HCFC2-202ENST00000544223 ZPBPQ9BS86 351 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms