RNA–Protein interactions for RNA: ENST00000543695.5

LDHA-222, Transcript of lactate dehydrogenase A, human

TSL 5

Gene LDHA, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-222	ENST00000543695	OR6C70	A6NIJ9	312 aa		10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	NOTO	A8MTQ0	251 aa		10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	HCRTR2	O43614	444 aa		10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	CPNE3	O75131	537 aa	Known RBP	10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	DXO	O77932	396 aa	Known RBP	10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	ONECUT2	O95948	504 aa		10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	TACSTD2	P09758	323 aa		10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	TALDO1	P37837	337 aa		10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	HTR3A	P46098	478 aa		10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	TMED10	P49755	219 aa	Known RBP	10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	POLR2H	P52434	150 aa	Known RBP	10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	HCCS	P53701	268 aa		10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	RPL18	Q07020	188 aa	Known RBP	10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	P2RY14	Q15391	338 aa		10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	ZNF684	Q5T5D7	378 aa		10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	BAIAP2L2	Q6UXY1	529 aa		10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	RPTN	Q6XPR3	784 aa		10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	MAMDC2	Q7Z304	686 aa	Predicted RBP	10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	MARCH3	Q86UD3	253 aa		10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	SCAI	Q8N9R8	606 aa		10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	OR51L1	Q8NGJ5	315 aa		10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	OR6K6	Q8NGW6	343 aa		10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	OR2T4	Q8NH00	348 aa		10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	OR6S1	Q8NH40	331 aa		10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	ENKUR	Q8TC29	256 aa		10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	STK35	Q8TDR2	534 aa		10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	SMAP2	Q8WU79	429 aa	Predicted RBP	10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	TAAR8	Q969N4	342 aa		10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	KTI12	Q96EK9	354 aa	Predicted RBP	10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	FAM210A	Q96ND0	272 aa		10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	TSPAN32	Q96QS1	320 aa		10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	RTN4R	Q9BZR6	473 aa		10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	SEMA4C	Q9C0C4	833 aa		10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	PPIL3	Q9H2H8	161 aa	Known RBP	10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	MARCH7	Q9H992	704 aa		10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	MOV10	Q9HCE1	1003 aa	Known RBP	10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	RABL2A	Q9UBK7	228 aa	Predicted RBP	10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	EXTL2	Q9UBQ6	330 aa		10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	GRHPR	Q9UBQ7	328 aa		10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	RABL2B	Q9UNT1	228 aa		10.19	□□□□□ -0.78
LDHA-222	ENST00000543695	ATRX	P46100	2492 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	TRBV2	A0A0J9YWF9	115 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	MEIOC	A2RUB1	952 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	HMX3	A6NHT5	357 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	ZNF879	B4DU55	563 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695		B4DXG7	233 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	PDCD5	O14737	125 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	PHYH	O14832	338 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	SLC25A12	O75746	678 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	CCNK	O75909	580 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	IGHM	P01871	453 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	ABCD3	P28288	659 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	EVI2B	P34910	448 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	CENPA	P49450	140 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	OR10A3	P58181	314 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	SLC26A5	P58743	744 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	RPS11	P62280	158 aa	Known RBP eCLIP	10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	DBP	Q10586	325 aa	Predicted RBP	10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	QPRT	Q15274	297 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	SGCB	Q16585	318 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	MEST	Q5EB52	335 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	FAM27D1	Q5T7N8	215 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	EEF1A1P5	Q5VTE0	462 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	PYHIN1	Q6K0P9	492 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	LANCL3	Q6ZV70	420 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	FAM220A	Q7Z4H9	259 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	ANKRD37	Q7Z713	158 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	CDC20B	Q86Y33	519 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	TIGD4	Q8IY51	512 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	DUSP18	Q8NEJ0	188 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	OR4M1	Q8NGD0	313 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	OR4D9	Q8NGE8	314 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	TRMT10A	Q8TBZ6	339 aa	Known RBP	10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	GPR119	Q8TDV5	335 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	ZNF524	Q96C55	264 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	SLC7A5P2	Q9GIP4	190 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	PRORY	Q9H606	182 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	RNF121	Q9H920	327 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	B3GAT2	Q9NPZ5	323 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	RPRD1B	Q9NQG5	326 aa	Known RBP	10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	INIP	Q9NRY2	104 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	SLC22A11	Q9NSA0	550 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	ACOXL	Q9NUZ1	547 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	RBFOX1	Q9NWB1	397 aa	Known RBP	10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	TAS2R10	Q9NYW0	307 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	CTSF	Q9UBX1	484 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	MALT1	Q9UDY8	824 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	PPIE	Q9UNP9	301 aa	Known RBP	10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	RASD1	Q9Y272	281 aa		10.18	□□□□□ -0.78
LDHA-222	ENST00000543695	SEC16A	O15027	2179 aa		10.17	□□□□□ -0.78
LDHA-222	ENST00000543695	TMED7-TICAM2	A0A0A6YYA0	188 aa		10.17	□□□□□ -0.78
LDHA-222	ENST00000543695	ARPC4-TTLL3	A0A0A6YYG9	625 aa		10.17	□□□□□ -0.78
LDHA-222	ENST00000543695	LINC00854	A0A1B0GVQ3	168 aa		10.17	□□□□□ -0.78
LDHA-222	ENST00000543695	TMEM72	A0PK05	275 aa		10.17	□□□□□ -0.78
LDHA-222	ENST00000543695	CDC14C	A4D256	554 aa		10.17	□□□□□ -0.78
LDHA-222	ENST00000543695		A8MVM7	634 aa		10.17	□□□□□ -0.78
LDHA-222	ENST00000543695	LYRM1	O43325	122 aa		10.17	□□□□□ -0.78
LDHA-222	ENST00000543695	SUSD5	O60279	629 aa		10.17	□□□□□ -0.78
LDHA-222	ENST00000543695	NPIPB7	O75200	414 aa		10.17	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms