RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-219	ENST00000543660	ANGPTL1	O95841	491 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	BCL10	O95999	233 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	KLK1	P06870	262 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	IGFBP1	P08833	259 aa	Predicted RBP	4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	NUDT17	P0C025	328 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	LYNX1	P0DP58	116 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	ME2	P23368	584 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	PRTN3	P24158	256 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	PITPNB	P48739	271 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	PPOX	P50336	477 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	IDH3G	P51553	393 aa	Predicted RBP	4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	CLRN1	P58418	232 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	PRR5	P85299	388 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	SLC25A3	Q00325	362 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	SRSF4	Q08170	494 aa	Known RBP	4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	ZMYND11	Q15326	602 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	OR4D1	Q15615	310 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	MLANA	Q16655	118 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	PLPPR5	Q32ZL2	321 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	AARD	Q4LEZ3	155 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	GAGE13	Q4V321	117 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	SPANXN3	Q5MJ09	141 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	SH2D4B	Q5SQS7	431 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	PDSS1	Q5T2R2	415 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	SERTAD4-AS1	Q5TG53	156 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	TRMT10B	Q6PF06	316 aa	Known RBP	4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660		Q6ZPA2	131 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	C1QL2	Q7Z5L3	287 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	ZC3HC1	Q86WB0	502 aa	Known RBP	4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	CARM1	Q86X55	608 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	IGDCC3	Q8IVU1	814 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	ELMOD2	Q8IZ81	293 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	ZCCHC24	Q8N2G6	241 aa	Known RBP	4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	SLC43A2	Q8N370	569 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	WDR31	Q8NA23	367 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	SYT14	Q8NB59	555 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	TRIM58	Q8NG06	486 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	OR52M1	Q8NGK5	317 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	CLDND2	Q8NHS1	167 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	WDR20	Q8TBZ3	569 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	AGR3	Q8TD06	166 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	SLC9A6	Q92581	669 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	NPIPB3	Q92617	1050 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	TAF15	Q92804	592 aa	Known RBP eCLIP	4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	ITFG2	Q969R8	447 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	LRRC58	Q96CX6	371 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	C1orf147	Q96MC9	270 aa	Predicted RBP	4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	MUS81	Q96NY9	551 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	ZNF300	Q96RE9	604 aa	Predicted RBP	4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	PTDSS2	Q9BVG9	487 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	RACGAP1	Q9H0H5	632 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	RAB17	Q9H0T7	212 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	RAB1B	Q9H0U4	201 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	NTN4	Q9HB63	628 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	GPN1	Q9HCN4	374 aa	Predicted RBP	4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	TIGAR	Q9NQ88	270 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	SLC6A13	Q9NSD5	602 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	DDX28	Q9NUL7	540 aa	Known RBP	4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	MED17	Q9NVC6	651 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	ING3	Q9NXR8	418 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	CD274	Q9NZQ7	290 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	FAM30A	Q9NZY2	134 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	HSPB7	Q9UBY9	170 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	NKX1-2	Q9UD57	310 aa	Predicted RBP	4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	MOK	Q9UQ07	419 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	OR10H1	Q9Y4A9	318 aa		4.17	□□□□□ -1.74
NPIPB4-219	ENST00000543660	COL7A1	Q02388	2944 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	DNAH3	Q8TD57	4116 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660		A0A1B0GWJ7	208 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	CIB4	A0PJX0	185 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	ZC3H12D	A2A288	527 aa	Known RBP	4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	CCT8L1P	A6NM43	557 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	ZNF724	A8MTY0	619 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	WNT9B	O14905	357 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	SCGB2A1	O75556	95 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	MTRF1	O75570	445 aa	Known RBP	4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	PDE5A	O76074	875 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	TOX4	O94842	621 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	SEMA3D	O95025	777 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	UTS2	O95399	124 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	FSHB	P01225	129 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	IGHV3-9	P01782	118 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	KRT14	P02533	472 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	OR4A8	P0C604	315 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	LINGO3	P0C6S8	592 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	VSIG10L2	P0DP72	767 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	CD1D	P15813	335 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	DDX5	P17844	614 aa	Known RBP	4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	MDK	P21741	143 aa	Predicted RBP	4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	DRD4	P21917	467 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	GAL	P22466	123 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	CALB2	P22676	271 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	CDA	P32320	146 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	SFTPD	P35247	375 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	FRK	P42685	505 aa	Predicted RBP	4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	MTNR1A	P48039	350 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	CLK3	P49761	638 aa	Known RBP	4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	MAPK12	P53778	367 aa		4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	FOXG1	P55316	489 aa	Predicted RBP	4.16	□□□□□ -1.74
NPIPB4-219	ENST00000543660	ATP5I	P56385	69 aa	Predicted RBP	4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms