RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 ZNF100Q8IYN0 542 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 DEPDC4Q8N2C3 294 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 ZNF843Q8N446 348 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 LNX2Q8N448 690 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 OR4Q3Q8NH05 313 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 FAM81AQ8TBF8 368 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 ASB10Q8WXI3 467 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 ZNF566Q969W8 418 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 OTULINQ96BN8 352 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 INTS12Q96CB8 462 aaKnown RBP10.58□□□□□ -0.72
DDB1-223ENST00000543658 RASD2Q96D21 266 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 Q96M85 177 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 TSPAN32Q96QS1 320 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 ZNF184Q99676 751 aaPredicted RBP10.58□□□□□ -0.72
DDB1-223ENST00000543658 VKORC1Q9BQB6 163 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 TTYH2Q9BSA4 534 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 GRIP2Q9C0E4 1043 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 BCO1Q9HAY6 547 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 B3GAT2Q9NPZ5 323 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 FAM118AQ9NWS6 357 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 TVP23BQ9NYZ1 205 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 RCE1Q9Y256 329 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 FAM215AQ9Y5M1 114 aa10.58□□□□□ -0.72
DDB1-223ENST00000543658 ESPL1Q14674 2120 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 SLC35F4A4IF30 521 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 OR6C65A6NJZ3 312 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 HSPB2A8KAH6 182 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 KDM4EB2RXH2 506 aaPredicted RBP10.57□□□□□ -0.72
DDB1-223ENST00000543658 H0YAE9 185 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 CCL21O00585 134 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 ARHGEF9O43307 516 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 SS18L1O75177 396 aaPredicted RBP10.57□□□□□ -0.72
DDB1-223ENST00000543658 CRHP06850 196 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 AGTR1P30556 359 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 GGT2P36268 569 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.57□□□□□ -0.72
DDB1-223ENST00000543658 CD47Q08722 323 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 CAMK2DQ13557 499 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 HSPB2Q16082 182 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 RIPPLY2Q5TAB7 128 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 CARD17Q5XLA6 110 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 RTL6Q6ICC9 239 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 LEG1Q6P5S2 330 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 DNM1P34Q6PK57 102 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 FAM122BQ7Z309 247 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 ARIH2OSQ8N7S6 290 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 SDR9C7Q8NEX9 313 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 NOXO1Q8NFA2 376 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 OR52E2Q8NGJ4 325 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 OR6N1Q8NGY5 312 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 OR4K13Q8NH42 304 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 OR6X1Q8NH79 312 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 PRR7Q8TB68 274 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 FNDC8Q8TC99 324 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 RND1Q92730 232 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 TMEM45BQ96B21 275 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 APH1AQ96BI3 265 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 ZNF775Q96BV0 537 aaPredicted RBP10.57□□□□□ -0.72
DDB1-223ENST00000543658 HRASLS5Q96KN8 279 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 ZNF385AQ96PM9 386 aaKnown RBP10.57□□□□□ -0.72
DDB1-223ENST00000543658 EMC6Q9BV81 110 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 C12orf49Q9H741 205 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 ASB6Q9NWX5 421 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 UPB1Q9UBR1 384 aa10.57□□□□□ -0.72
DDB1-223ENST00000543658 NBEAQ8NFP9 2946 aa10.56□□□□□ -0.72
DDB1-223ENST00000543658 A0A1B0GUH1 482 aa10.56□□□□□ -0.72
DDB1-223ENST00000543658 CENPBD1B2RD01 187 aa10.56□□□□□ -0.72
DDB1-223ENST00000543658 PRR23D1E9PI22 279 aaPredicted RBP10.56□□□□□ -0.72
DDB1-223ENST00000543658 SLC16A6O15403 523 aa10.56□□□□□ -0.72
DDB1-223ENST00000543658 MPZL2O60487 215 aa10.56□□□□□ -0.72
DDB1-223ENST00000543658 TXNDC12O95881 172 aa10.56□□□□□ -0.72
DDB1-223ENST00000543658 STSP08842 583 aa10.56□□□□□ -0.72
DDB1-223ENST00000543658 PRR23D2P0DMB1 279 aaPredicted RBP10.56□□□□□ -0.72
DDB1-223ENST00000543658 GLI4P10075 376 aa10.56□□□□□ -0.72
DDB1-223ENST00000543658 ACADSP16219 412 aa10.56□□□□□ -0.72
DDB1-223ENST00000543658 HIST1H1CP16403 213 aaKnown RBP10.56□□□□□ -0.72
DDB1-223ENST00000543658 GNLYP22749 145 aa10.56□□□□□ -0.72
DDB1-223ENST00000543658 EPHA2P29317 976 aa10.56□□□□□ -0.72
DDB1-223ENST00000543658 POLR2IP36954 125 aaKnown RBP10.56□□□□□ -0.72
DDB1-223ENST00000543658 CSNK1A1P48729 337 aa10.56□□□□□ -0.72
DDB1-223ENST00000543658 IL5RAQ01344 420 aa10.56□□□□□ -0.72
DDB1-223ENST00000543658 PMPCAQ10713 525 aa10.56□□□□□ -0.72
DDB1-223ENST00000543658 IL18R1Q13478 541 aa10.56□□□□□ -0.72
DDB1-223ENST00000543658 SOWAHCQ53LP3 525 aaPredicted RBP10.56□□□□□ -0.72
DDB1-223ENST00000543658 MESTQ5EB52 335 aa10.56□□□□□ -0.72
DDB1-223ENST00000543658 C6orf52Q5T4I8 152 aa10.56□□□□□ -0.72
DDB1-223ENST00000543658 C12orf73Q69YU5 71 aa10.56□□□□□ -0.72
DDB1-223ENST00000543658 ACSM5Q6NUN0 579 aa10.56□□□□□ -0.72
DDB1-223ENST00000543658 MTFR2Q6P444 385 aa10.56□□□□□ -0.72
DDB1-223ENST00000543658 PTCHD4Q6ZW05 846 aa10.56□□□□□ -0.72
DDB1-223ENST00000543658 FAM214BQ7L5A3 538 aa10.56□□□□□ -0.72
DDB1-223ENST00000543658 ABHD12BQ7Z5M8 362 aaPredicted RBP10.56□□□□□ -0.72
DDB1-223ENST00000543658 C8orf59Q8N0T1 100 aaPredicted RBP10.56□□□□□ -0.72
DDB1-223ENST00000543658 UBE2J2Q8N2K1 259 aa10.56□□□□□ -0.72
DDB1-223ENST00000543658 GPR137CQ8N3F9 429 aa10.56□□□□□ -0.72
DDB1-223ENST00000543658 OR6K3Q8NGY3 331 aa10.56□□□□□ -0.72
DDB1-223ENST00000543658 ZNF519Q8TB69 540 aa10.56□□□□□ -0.72
DDB1-223ENST00000543658 SLC25A44Q96H78 314 aaPredicted RBP10.56□□□□□ -0.72
DDB1-223ENST00000543658 TXNDC15Q96J42 360 aa10.56□□□□□ -0.72
DDB1-223ENST00000543658 RBP7Q96R05 134 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms