RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 HNRNPA2B1P22626 353 aaKnown RBP3.97□□□□□ -1.77
SNHG1-219ENST00000542112 ANOS1P23352 680 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 DGKAP23743 735 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 CPT2P23786 658 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 ZBTB25P24278 435 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 ACKR3P25106 362 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 GABRR2P28476 465 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 PTPN6P29350 595 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 TM4SF1P30408 202 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 HOXA13P31271 388 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-219ENST00000542112 IL2RGP31785 369 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 TGFBR1P36897 503 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 PSMB10P40306 273 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 NPBWR1P48145 328 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 PPOXP50336 477 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 MMP15P51511 669 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 NOVA1P51513 510 aaKnown RBP3.97□□□□□ -1.77
SNHG1-219ENST00000542112 CAV2P51636 162 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 EFNA3P52797 238 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 TMEM33P57088 247 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 DAOAP59103 153 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 ERVS71-1P61550 626 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 SRSF3P84103 164 aaKnown RBP3.97□□□□□ -1.77
SNHG1-219ENST00000542112 ST3GAL4Q11206 333 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 HNRNPA0Q13151 305 aaKnown RBP3.97□□□□□ -1.77
SNHG1-219ENST00000542112 PRDX4Q13162 271 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 PPIGQ13427 754 aaKnown RBP eCLIP3.97□□□□□ -1.77
SNHG1-219ENST00000542112 CBFBQ13951 182 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 RCAN2Q14206 197 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 SPHARQ15513 63 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 SLC9A3R2Q15599 337 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 OR4D1Q15615 310 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 HSPB2Q16082 182 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 ST3GAL2Q16842 350 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 SMIM21Q3B7S5 101 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 PLK5Q496M5 336 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 MORN2Q502X0 79 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 CARD16Q5EG05 197 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 ZNF667Q5HYK9 610 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 COA6Q5JTJ3 125 aaKnown RBP3.97□□□□□ -1.77
SNHG1-219ENST00000542112 CBWD3Q5JTY5 395 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 CBWD5Q5RIA9 395 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 PRAMEF14Q5SWL7 426 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 OTUD1Q5VV17 481 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-219ENST00000542112 MBNL2Q5VZF2 373 aaKnown RBP3.97□□□□□ -1.77
SNHG1-219ENST00000542112 TMEM198Q66K66 360 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 NCR3LG1Q68D85 454 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 AWAT2Q6E213 333 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 CD200R1LQ6Q8B3 271 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 MFSD7Q6UXD7 560 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 GLDNQ6ZMI3 551 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-219ENST00000542112 PID1Q7Z2X4 250 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 C6orf120Q7Z4R8 191 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 GOLGA7Q7Z5G4 137 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 VTCN1Q7Z7D3 282 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 VASH2Q86V25 355 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 SLC41A1Q8IVJ1 513 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 IGDCC3Q8IVU1 814 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 CCDC117Q8IWD4 279 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-219ENST00000542112 KIR2DL5AQ8N109 375 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 ZNF664Q8N3J9 261 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 C17orf78Q8N4C9 275 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 BPIFB2Q8N4F0 458 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 TOMM5Q8N4H5 51 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 DNAJC5GQ8N7S2 189 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 FBXL13Q8NEE6 735 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 OR4F15Q8NGB8 312 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 OR4K2Q8NGD2 314 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 OR10AD1Q8NGE0 317 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 OR5AP2Q8NGF4 316 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 OR51L1Q8NGJ5 315 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 OR14C36Q8NHC7 312 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 CXorf40AQ8TE69 158 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 HASPINQ8TF76 798 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 PCNPQ8WW12 178 aaKnown RBP3.97□□□□□ -1.77
SNHG1-219ENST00000542112 TMEM234Q8WY98 164 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 SMPDL3AQ92484 453 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 FBXO32Q969P5 355 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 VOPP1Q96AW1 172 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 TIFAQ96CG3 184 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 RASD2Q96D21 266 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 ALG14Q96F25 216 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 C4orf36Q96KX1 117 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 TMEM56Q96MV1 263 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 OR2V2Q96R30 315 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 OR52E6Q96RD3 313 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 FCRL5Q96RD9 977 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 C20orf144Q9BQM9 153 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 CBWD1Q9BRT8 395 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 SUCNR1Q9BXA5 334 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 GPR87Q9BY21 358 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 GLIS2Q9BZE0 524 aaPredicted RBP3.97□□□□□ -1.77
SNHG1-219ENST00000542112 WDR11Q9BZH6 1224 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 GREM2Q9H772 168 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 PLEKHA2Q9HB19 425 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 CSNK1G1Q9HCP0 422 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 MYOZ2Q9NPC6 264 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 EXOSC4Q9NPD3 245 aaKnown RBP3.97□□□□□ -1.77
SNHG1-219ENST00000542112 IL17RBQ9NRM6 502 aa3.97□□□□□ -1.77
SNHG1-219ENST00000542112 THSD1Q9NS62 852 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms