RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 KCNN2Q9H2S1 579 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 IKZF5Q9H5V7 419 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 NANOGQ9H9S0 305 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 B3GAT1Q9P2W7 334 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 LPAR3Q9UBY5 353 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 PRR14LQ5THK1 2151 aa9.06□□□□□ -0.96
CDCA3-208ENST00000540683 IGKV1D-42A0A075B6H8 117 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 A0A096LPE4 126 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 IGHV1-18A0A0C4DH31 117 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 A0A1W2PPZ6 126 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 LOC390937A0A1W2PQ73 354 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 CPSF4LA6NMK7 179 aaKnown RBP9.05□□□□□ -0.96
CDCA3-208ENST00000540683 ATP6V1G2-DDX39BF2Z307 99 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 MS4A18H0YCH9 400 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 M0R3G1 203 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 RNF13O43567 381 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 TRAF3IP2O43734 574 aaPredicted RBP9.05□□□□□ -0.96
CDCA3-208ENST00000540683 CD5LO43866 347 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 GMNNO75496 209 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 OR5F1O95221 314 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 BCL10O95999 233 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 IGHG1P01857 330 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 BGLAPP02818 100 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 CECR9P0C854 216 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 OR8G3PP0DMU2 310 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 NPR2P20594 1047 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 EVX1P49640 407 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 ZNF84P51523 738 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 LOXL1Q08397 574 aaPredicted RBP9.05□□□□□ -0.96
CDCA3-208ENST00000540683 ST3GAL3Q11203 375 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 MS4A18Q3C1V0 323 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 ANKDD1AQ495B1 522 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 OXLD1Q5BKU9 147 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 LINC00114Q6XXX2 140 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 ZNF813Q6ZN06 617 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 DNM1P46Q6ZS02 220 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 C1orf174Q8IYL3 243 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 TMEM123Q8N131 208 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 OR2T12Q8NG77 320 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 OR10H5Q8NGA6 315 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 RP9Q8TA86 221 aaKnown RBP9.05□□□□□ -0.96
CDCA3-208ENST00000540683 FBXO17Q96EF6 278 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 THOC1Q96FV9 657 aaKnown RBP9.05□□□□□ -0.96
CDCA3-208ENST00000540683 SMR3AQ99954 134 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 HOPXQ9BPY8 73 aaPredicted RBP9.05□□□□□ -0.96
CDCA3-208ENST00000540683 PIMREGQ9BSJ6 248 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 CCDC134Q9H6E4 229 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 TLN2Q9Y4G6 2542 aa9.05□□□□□ -0.96
CDCA3-208ENST00000540683 SLC35F4A4IF30 521 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 NPIPB13A6NJU9 1138 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 FAM220BPB1ANY3 271 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 NPIPB4C9JG80 1138 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 MCIDASD6RGH6 385 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 M0R3H8 397 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 ATP8B1O43520 1251 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 CRLF1O75462 422 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 OR4A8P0C604 315 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 CD79AP11912 226 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 GZMKP49863 264 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 IDH3GP51553 393 aaPredicted RBP9.04□□□□□ -0.96
CDCA3-208ENST00000540683 FOXG1P55316 489 aaPredicted RBP9.04□□□□□ -0.96
CDCA3-208ENST00000540683 CLRN1P58418 232 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 SPOCK1Q08629 439 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 KLF10Q13118 480 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 CAMK2DQ13557 499 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 DAG1Q14118 895 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 ZNF74Q16587 644 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 MOGQ16653 247 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 SLC36A2Q495M3 483 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 GLIPR1L2Q4G1C9 344 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 GKAP1Q5VSY0 366 aaPredicted RBP9.04□□□□□ -0.96
CDCA3-208ENST00000540683 FAM205BPQ63HN1 556 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 TMEM53Q6P2H8 277 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 SLC35D2Q76EJ3 337 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 CDK20Q8IZL9 346 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 CIARTQ8N365 385 aaPredicted RBP9.04□□□□□ -0.96
CDCA3-208ENST00000540683 KDM8Q8N371 416 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 OR6T1Q8NGN1 323 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 OR1J2Q8NGS2 313 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 VANGL1Q8TAA9 524 aaPredicted RBP9.04□□□□□ -0.96
CDCA3-208ENST00000540683 CMTM5Q96DZ9 223 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 TNFRSF13CQ96RJ3 184 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 FOXB1Q99853 325 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 ZNF426Q9BUY5 554 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 NSRP1Q9H0G5 558 aaKnown RBP9.04□□□□□ -0.96
CDCA3-208ENST00000540683 MS4A5Q9H3V2 200 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 PLK3Q9H4B4 646 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 DYNLRB1Q9NP97 96 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 FGFR1OP2Q9NVK5 253 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 TMEM160Q9NX00 188 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 GLTPQ9NZD2 209 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 CDC42EP3Q9UKI2 254 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 ZNF346Q9UL40 294 aaKnown RBP9.04□□□□□ -0.96
CDCA3-208ENST00000540683 SLC7A7Q9UM01 511 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 SH3GLB1Q9Y371 365 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 MED31Q9Y3C7 131 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 CMAHPQ9Y471 501 aa9.04□□□□□ -0.96
CDCA3-208ENST00000540683 ELOVL7A1L3X0 281 aa9.03□□□□□ -0.96
CDCA3-208ENST00000540683 A8MV72 311 aaPredicted RBP9.03□□□□□ -0.96
CDCA3-208ENST00000540683 GSTA4O15217 222 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms