RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 Q96M85 177 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 OR2M2Q96R28 347 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 TSSK6Q9BXA6 273 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 POLDIP3Q9BY77 421 aaKnown RBP9.36□□□□□ -0.91
VPS33A-204ENST00000540669 VCXQ9H320 206 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 FN3KQ9H479 309 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 GLRX2Q9NS18 164 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 VSX1Q9NZR4 365 aaPredicted RBP9.36□□□□□ -0.91
VPS33A-204ENST00000540669 IL20RAQ9UHF4 553 aa9.36□□□□□ -0.91
VPS33A-204ENST00000540669 A0A1B0GUH1 482 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 E9PLN8 166 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 BLOC1S5-TXNDC5H3BN57 136 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 GPR171O14626 319 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 AHCYL1O43865 530 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 SYNGR4O95473 234 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 CGAP01215 116 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 F13BP05160 661 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 TPOP07202 933 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 GNAO1P09471 354 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 GLI4P10075 376 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 IFNGR1P15260 489 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 ABOP16442 354 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 CAPGP40121 348 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 KIR2DL2P43627 348 aaPredicted RBP9.35□□□□□ -0.91
VPS33A-204ENST00000540669 DAP3P51398 398 aaKnown RBP9.35□□□□□ -0.91
VPS33A-204ENST00000540669 RPS6KA3P51812 740 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 SMSP52788 366 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 CTXN1P60606 82 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 ISL1P61371 349 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 TEKQ02763 1124 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 RUNX1T1Q06455 604 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 RASGEF1BQ0VAM2 473 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 KRR1Q13601 381 aaKnown RBP9.35□□□□□ -0.91
VPS33A-204ENST00000540669 GINS1Q14691 196 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 SF3B4Q15427 424 aaKnown RBP eCLIP9.35□□□□□ -0.91
VPS33A-204ENST00000540669 STK11Q15831 433 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 IGFBP7Q16270 282 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 RIPPLY2Q5TAB7 128 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 OR2A2Q6IF42 318 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 LAIR2Q6ISS4 152 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 MTFR2Q6P444 385 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 B3GNT6Q6ZMB0 384 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 FOXL2NBQ6ZUU3 175 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 SLC35D2Q76EJ3 337 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 IGFN1Q86VF2 1251 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 UEVLDQ8IX04 471 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 KDM8Q8N371 416 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 FAM26EQ8N5C1 309 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 NPEPL1Q8NDH3 523 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 HDAC2Q92769 488 aaKnown RBP9.35□□□□□ -0.91
VPS33A-204ENST00000540669 TMEM54Q969K7 222 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 ADAD1Q96M93 576 aaKnown RBP9.35□□□□□ -0.91
VPS33A-204ENST00000540669 ZNF570Q96NI8 536 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 TM9SF2Q99805 663 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 VKORC1Q9BQB6 163 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 TTYH2Q9BSA4 534 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 ALG12Q9BV10 488 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 LINC00470Q9BZP3 86 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 RIBC2Q9H4K1 309 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 MED29Q9NX70 200 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 MALT1Q9UDY8 824 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 TINAGQ9UJW2 476 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 RAB26Q9ULW5 256 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 HSPE1-MOB4S4R3N1 261 aa9.35□□□□□ -0.91
VPS33A-204ENST00000540669 ANKHD1Q8IWZ3 2542 aaKnown RBP9.34□□□□□ -0.91
VPS33A-204ENST00000540669 IGLV1-36A0A0B4J1U3 117 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 TEX13CA0A0J9YWL9 993 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 LOC100130705A0A1B0GUX0 176 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 H3BN98 237 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 PRRG2O14669 202 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 RNF13O43567 381 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 IL18BPO95998 194 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 HIST1H2ABP04908 130 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 YES1P07947 543 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 HIST1H1CP16403 213 aaKnown RBP9.34□□□□□ -0.91
VPS33A-204ENST00000540669 ZNF43P17038 809 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 SLC2A5P22732 501 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 GNLYP22749 145 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 MYF6P23409 242 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 PCYT1AP49585 367 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 SLC25A1P53007 311 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 SNRPGP62308 76 aaKnown RBP9.34□□□□□ -0.91
VPS33A-204ENST00000540669 ERVK-25P63136 954 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 ZIK1Q3SY52 487 aaPredicted RBP9.34□□□□□ -0.91
VPS33A-204ENST00000540669 CLEC12AQ5QGZ9 265 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 C10orf128Q5T292 105 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 AADACL4Q5VUY2 407 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 TMEM236Q5W0B7 351 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 TTC23Q5W5X9 447 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 FAM214BQ7L5A3 538 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 HIST3H2AQ7L7L0 130 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 ZNF627Q7L945 461 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 HDDC2Q7Z4H3 204 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 ZBTB46Q86UZ6 589 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 ENTHD1Q8IYW4 607 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 NOXO1Q8NFA2 376 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 RHOXF1Q8NHV9 184 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 APH1BQ8WW43 257 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 HIST1H2ACQ93077 130 aa9.34□□□□□ -0.91
VPS33A-204ENST00000540669 KISS1RQ969F8 398 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms