RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 GLYATQ6IB77 296 aa7.74□□□□□ -1.17
TRAPPC1-202ENST00000540486 ULK3Q6PHR2 472 aa7.74□□□□□ -1.17
TRAPPC1-202ENST00000540486 WDR88Q6ZMY6 472 aa7.74□□□□□ -1.17
TRAPPC1-202ENST00000540486 STK32CQ86UX6 486 aa7.74□□□□□ -1.17
TRAPPC1-202ENST00000540486 PGAM4Q8N0Y7 254 aa7.74□□□□□ -1.17
TRAPPC1-202ENST00000540486 SLC43A2Q8N370 569 aa7.74□□□□□ -1.17
TRAPPC1-202ENST00000540486 RNF148Q8N7C7 305 aa7.74□□□□□ -1.17
TRAPPC1-202ENST00000540486 TMEM99Q8N816 258 aa7.74□□□□□ -1.17
TRAPPC1-202ENST00000540486 FAM156AQ8NDB6 213 aa7.74□□□□□ -1.17
TRAPPC1-202ENST00000540486 ZNF540Q8NDQ6 660 aa7.74□□□□□ -1.17
TRAPPC1-202ENST00000540486 VANGL1Q8TAA9 524 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC1-202ENST00000540486 STK35Q8TDR2 534 aa7.74□□□□□ -1.17
TRAPPC1-202ENST00000540486 DNAJA4Q8WW22 397 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC1-202ENST00000540486 RASSF5Q8WWW0 418 aa7.74□□□□□ -1.17
TRAPPC1-202ENST00000540486 MRPL24Q96A35 216 aaKnown RBP7.74□□□□□ -1.17
TRAPPC1-202ENST00000540486 DDIT4LQ96D03 193 aa7.74□□□□□ -1.17
TRAPPC1-202ENST00000540486 KTI12Q96EK9 354 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC1-202ENST00000540486 RADILQ96JH8 1075 aa7.74□□□□□ -1.17
TRAPPC1-202ENST00000540486 ZNF300Q96RE9 604 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC1-202ENST00000540486 CDRT15Q96T59 188 aa7.74□□□□□ -1.17
TRAPPC1-202ENST00000540486 PIMREGQ9BSJ6 248 aa7.74□□□□□ -1.17
TRAPPC1-202ENST00000540486 PTDSS2Q9BVG9 487 aa7.74□□□□□ -1.17
TRAPPC1-202ENST00000540486 BCO1Q9HAY6 547 aa7.74□□□□□ -1.17
TRAPPC1-202ENST00000540486 C12orf10Q9HB07 376 aa7.74□□□□□ -1.17
TRAPPC1-202ENST00000540486 TMEM27Q9HBJ8 222 aa7.74□□□□□ -1.17
TRAPPC1-202ENST00000540486 GLRX2Q9NS18 164 aa7.74□□□□□ -1.17
TRAPPC1-202ENST00000540486 ADA2Q9NZK5 511 aa7.74□□□□□ -1.17
TRAPPC1-202ENST00000540486 TESQ9UGI8 421 aaKnown RBP7.74□□□□□ -1.17
TRAPPC1-202ENST00000540486 RYR3Q15413 4870 aa7.74□□□□□ -1.17
TRAPPC1-202ENST00000540486 DPRXA6NFQ7 191 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 CPSF4LA6NMK7 179 aaKnown RBP7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 ZNF716A6NP11 495 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 SHISA9B4DS77 424 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 FTCDNL1E5RQL4 147 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 NDUFAB1O14561 156 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 AKR7A3O95154 331 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 IFNA14P01570 189 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 YES1P07947 543 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 ZNF23P17027 643 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 GGT1P19440 569 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 AGTR1P30556 359 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 RBMXP38159 391 aaKnown RBP7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 RPS5P46782 204 aaKnown RBP7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 CDH11P55287 796 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 SLC35A1P78382 337 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 RASGEF1BQ0VAM2 473 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 PDK3Q15120 406 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 RNPS1Q15287 305 aaKnown RBP7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 OR7A5Q15622 319 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 FXNQ16595 210 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 LRRC23Q53EV4 343 aaPredicted RBP7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 C1orf140Q5VVS0 124 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 UGT2A3Q6UWM9 527 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 RINLQ6ZS11 566 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 CBLL1Q75N03 491 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 TSEN54Q7Z6J9 526 aaKnown RBP7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 VTCN1Q7Z7D3 282 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 CARM1Q86X55 608 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 DEFB107AQ8IZN7 70 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 RBM15BQ8NDT2 890 aaKnown RBP7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 MFSD8Q8NHS3 518 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 ADAMTS16Q8TE57 1224 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 TAAR8Q969N4 342 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 S100PBPQ96BU1 408 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 SLC47A1Q96FL8 570 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 TPD52L3Q96J77 140 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 DMRTB1Q96MA1 342 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 KCTD14Q9BQ13 255 aaPredicted RBP7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 PRSS27Q9BQR3 290 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 PCDHAC1Q9H158 963 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 METTL17Q9H7H0 456 aaPredicted RBP7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 GP6Q9HCN6 339 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 SPAG4Q9NPE6 437 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 MED29Q9NX70 200 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 KLHL13Q9P2N7 655 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 RPS6KB2Q9UBS0 482 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 SLC13A4Q9UKG4 626 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 BAG5Q9UL15 447 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 SNX13Q9Y5W8 968 aa7.73□□□□□ -1.17
TRAPPC1-202ENST00000540486 IGKV3D-15A0A087WSY6 115 aa7.72□□□□□ -1.17
TRAPPC1-202ENST00000540486 IGHV4-61A0A0C4DH41 118 aa7.72□□□□□ -1.17
TRAPPC1-202ENST00000540486 ZNF724A8MTY0 619 aa7.72□□□□□ -1.17
TRAPPC1-202ENST00000540486 GSTA4O15217 222 aa7.72□□□□□ -1.17
TRAPPC1-202ENST00000540486 DNPH1O43598 174 aa7.72□□□□□ -1.17
TRAPPC1-202ENST00000540486 FZD7O75084 574 aa7.72□□□□□ -1.17
TRAPPC1-202ENST00000540486 PLGP00747 810 aaPredicted RBP7.72□□□□□ -1.17
TRAPPC1-202ENST00000540486 SERPINA1P01009 418 aa7.72□□□□□ -1.17
TRAPPC1-202ENST00000540486 GPIP06744 558 aa7.72□□□□□ -1.17
TRAPPC1-202ENST00000540486 PNMTP11086 282 aa7.72□□□□□ -1.17
TRAPPC1-202ENST00000540486 HSD17B1P14061 328 aa7.72□□□□□ -1.17
TRAPPC1-202ENST00000540486 TCN1P20061 433 aaPredicted RBP7.72□□□□□ -1.17
TRAPPC1-202ENST00000540486 PTNP21246 168 aa7.72□□□□□ -1.17
TRAPPC1-202ENST00000540486 SLC16A1P53985 500 aa7.72□□□□□ -1.17
TRAPPC1-202ENST00000540486 CTBP2P56545 445 aa7.72□□□□□ -1.17
TRAPPC1-202ENST00000540486 PIN1Q13526 163 aaPredicted RBP7.72□□□□□ -1.17
TRAPPC1-202ENST00000540486 SLC17A1Q14916 467 aa7.72□□□□□ -1.17
TRAPPC1-202ENST00000540486 TAB1Q15750 504 aa7.72□□□□□ -1.17
TRAPPC1-202ENST00000540486 IQCCQ4KMZ1 466 aa7.72□□□□□ -1.17
TRAPPC1-202ENST00000540486 TMEM201Q5SNT2 666 aa7.72□□□□□ -1.17
TRAPPC1-202ENST00000540486 ABLIM2Q6H8Q1 611 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms