RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 YES1P07947 543 aa13.73□□□□□ -0.21
DDB1-216ENST00000539739 SMIM18P0DKX4 95 aa13.73□□□□□ -0.21
DDB1-216ENST00000539739 TMIGD3P0DMS9 266 aaPredicted RBP13.73□□□□□ -0.21
DDB1-216ENST00000539739 CEACAM8P31997 349 aaPredicted RBP13.73□□□□□ -0.21
DDB1-216ENST00000539739 RPL4P36578 427 aaKnown RBP13.73□□□□□ -0.21
DDB1-216ENST00000539739 MTFR2Q6P444 385 aa13.73□□□□□ -0.21
DDB1-216ENST00000539739 KLHL17Q6TDP4 642 aa13.73□□□□□ -0.21
DDB1-216ENST00000539739 ZNF620Q6ZNG0 422 aa13.73□□□□□ -0.21
DDB1-216ENST00000539739 DCDC5Q6ZRR9 648 aa13.73□□□□□ -0.21
DDB1-216ENST00000539739 FJX1Q86VR8 437 aa13.73□□□□□ -0.21
DDB1-216ENST00000539739 LURAP1LQ8IV03 231 aa13.73□□□□□ -0.21
DDB1-216ENST00000539739 GCNT2Q8N0V5 402 aa13.73□□□□□ -0.21
DDB1-216ENST00000539739 CBR4Q8N4T8 237 aa13.73□□□□□ -0.21
DDB1-216ENST00000539739 OR52L1Q8NGH7 329 aa13.73□□□□□ -0.21
DDB1-216ENST00000539739 MOSPD2Q8NHP6 518 aa13.73□□□□□ -0.21
DDB1-216ENST00000539739 RND1Q92730 232 aa13.73□□□□□ -0.21
DDB1-216ENST00000539739 DMRTA2Q96SC8 542 aa13.73□□□□□ -0.21
DDB1-216ENST00000539739 OR52D1Q9H346 318 aa13.73□□□□□ -0.21
DDB1-216ENST00000539739 BCO1Q9HAY6 547 aa13.73□□□□□ -0.21
DDB1-216ENST00000539739 B3GAT1Q9P2W7 334 aa13.73□□□□□ -0.21
DDB1-216ENST00000539739 ENOPH1Q9UHY7 261 aa13.73□□□□□ -0.21
DDB1-216ENST00000539739 CLEC4AQ9UMR7 237 aa13.73□□□□□ -0.21
DDB1-216ENST00000539739 EMC9Q9Y3B6 208 aa13.73□□□□□ -0.21
DDB1-216ENST00000539739 ORC6Q9Y5N6 252 aa13.73□□□□□ -0.21
DDB1-216ENST00000539739 CDH10Q9Y6N8 788 aa13.73□□□□□ -0.21
DDB1-216ENST00000539739 HSPB2A8KAH6 182 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 EI24O14681 340 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 DENRO43583 198 aaKnown RBP13.72□□□□□ -0.21
DDB1-216ENST00000539739 AKAP8O43823 692 aaKnown RBP13.72□□□□□ -0.21
DDB1-216ENST00000539739 SS18L1O75177 396 aaPredicted RBP13.72□□□□□ -0.21
DDB1-216ENST00000539739 TNFAIP8O95379 198 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 HPRP00739 348 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 F13BP05160 661 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 IGFBP5P24593 272 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 ALDH3A2P51648 485 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 CTXN1P60606 82 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 PPP2R2BQ00005 443 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 POU3F1Q03052 451 aaPredicted RBP13.72□□□□□ -0.21
DDB1-216ENST00000539739 FHL1Q13642 323 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 DAG1Q14118 895 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 HSPB2Q16082 182 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 RFX4Q33E94 735 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 C4orf17Q53FE4 359 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 EEF1A1P5Q5VTE0 462 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 KDM4DQ6B0I6 523 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 CREB3L2Q70SY1 520 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 GALNT5Q7Z7M9 940 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 TUSC5Q8IXB3 177 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 CLDN22Q8N7P3 220 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 MAGEE2Q8TD90 523 aaPredicted RBP13.72□□□□□ -0.21
DDB1-216ENST00000539739 C8orf4Q9NR00 106 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 FLVCR1Q9Y5Y0 555 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 KIAA1549Q9HCM3 1950 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 H3BN98 237 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 CASQ2O14958 399 aaPredicted RBP13.72□□□□□ -0.21
DDB1-216ENST00000539739 LRRTM2O43300 516 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 TOXO94900 526 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 BCL10O95999 233 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 OSMP13725 252 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 CTSSP25774 331 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 SLC6A6P31641 620 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 ANKRD34AQ69YU3 496 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 UGT2A3Q6UWM9 527 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 DPY19L2P2Q6ZN68 376 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 SLC35D2Q76EJ3 337 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 FAM214BQ7L5A3 538 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 SPARTQ8N0X7 666 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 CNEP1R1Q8N9A8 125 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 ZNF775Q96BV0 537 aaPredicted RBP13.72□□□□□ -0.21
DDB1-216ENST00000539739 SAMD8Q96LT4 415 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 EGLN3Q9H6Z9 239 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 PARPBPQ9NWS1 579 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 USE1Q9NZ43 259 aa13.72□□□□□ -0.21
DDB1-216ENST00000539739 ING1Q9UK53 422 aaPredicted RBP13.72□□□□□ -0.21
DDB1-216ENST00000539739 NOSIPQ9Y314 301 aaKnown RBP13.72□□□□□ -0.21
DDB1-216ENST00000539739 MCIDASD6RGH6 385 aa13.71□□□□□ -0.22
DDB1-216ENST00000539739 SOCS2O14508 198 aa13.71□□□□□ -0.22
DDB1-216ENST00000539739 SOX14O95416 240 aa13.71□□□□□ -0.22
DDB1-216ENST00000539739 ALPLP05186 524 aa13.71□□□□□ -0.22
DDB1-216ENST00000539739 TFAP2AP05549 437 aa13.71□□□□□ -0.22
DDB1-216ENST00000539739 CD14P08571 375 aa13.71□□□□□ -0.22
DDB1-216ENST00000539739 HLA-DOBP13765 273 aa13.71□□□□□ -0.22
DDB1-216ENST00000539739 IFNGR1P15260 489 aa13.71□□□□□ -0.22
DDB1-216ENST00000539739 CDH2P19022 906 aaPredicted RBP13.71□□□□□ -0.22
DDB1-216ENST00000539739 POU1F1P28069 291 aa13.71□□□□□ -0.22
DDB1-216ENST00000539739 AGTR1P30556 359 aa13.71□□□□□ -0.22
DDB1-216ENST00000539739 DAP3P51398 398 aaKnown RBP13.71□□□□□ -0.22
DDB1-216ENST00000539739 RAD23AP54725 363 aa13.71□□□□□ -0.22
DDB1-216ENST00000539739 LRRC36Q1X8D7 754 aa13.71□□□□□ -0.22
DDB1-216ENST00000539739 RGS21Q2M5E4 152 aa13.71□□□□□ -0.22
DDB1-216ENST00000539739 LPCAT4Q643R3 524 aa13.71□□□□□ -0.22
DDB1-216ENST00000539739 HDDC2Q7Z4H3 204 aa13.71□□□□□ -0.22
DDB1-216ENST00000539739 KIF18BQ86Y91 864 aa13.71□□□□□ -0.22
DDB1-216ENST00000539739 PARP8Q8N3A8 854 aa13.71□□□□□ -0.22
DDB1-216ENST00000539739 LRRC75AQ8NAA5 344 aa13.71□□□□□ -0.22
DDB1-216ENST00000539739 TEX47Q8TBZ9 253 aa13.71□□□□□ -0.22
DDB1-216ENST00000539739 GPX7Q96SL4 187 aaPredicted RBP13.71□□□□□ -0.22
DDB1-216ENST00000539739 IFT27Q9BW83 186 aa13.71□□□□□ -0.22
DDB1-216ENST00000539739 SFXN3Q9BWM7 321 aa13.71□□□□□ -0.22
DDB1-216ENST00000539739 POLDIP3Q9BY77 421 aaKnown RBP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms