RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 FAM212BQ9NTI7 297 aaPredicted RBP2.3□□□□□ -2.04
TNFRSF1A-210ENST00000537842 DEPPQ9NTK1 212 aa2.3□□□□□ -2.04
TNFRSF1A-210ENST00000537842 GPR83Q9NYM4 423 aa2.3□□□□□ -2.04
TNFRSF1A-210ENST00000537842 STMN3Q9NZ72 180 aa2.3□□□□□ -2.04
TNFRSF1A-210ENST00000537842 OPTCQ9UBM4 332 aa2.3□□□□□ -2.04
TNFRSF1A-210ENST00000537842 DCDC2Q9UHG0 476 aa2.3□□□□□ -2.04
TNFRSF1A-210ENST00000537842 BCAP29Q9UHQ4 241 aa2.3□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ZNF639Q9UID6 485 aa2.3□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ERVK-19Q9WJR5 959 aa2.3□□□□□ -2.04
TNFRSF1A-210ENST00000537842 RAP2CQ9Y3L5 183 aa2.3□□□□□ -2.04
TNFRSF1A-210ENST00000537842 DNAJC15Q9Y5T4 150 aa2.3□□□□□ -2.04
TNFRSF1A-210ENST00000537842 A3GALT2U3KPV4 340 aa2.3□□□□□ -2.04
TNFRSF1A-210ENST00000537842 EML6Q6ZMW3 1958 aa2.3□□□□□ -2.04
TNFRSF1A-210ENST00000537842 MPDZO75970 2070 aa2.3□□□□□ -2.04
TNFRSF1A-210ENST00000537842 FREM3P0C091 2139 aa2.3□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CSPG4Q6UVK1 2322 aa2.3□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CADP27708 2225 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 MED13LQ71F56 2210 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 NSG1A0A0A6YYJ2 146 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 LINC00854A0A1B0GVQ3 168 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ATP6AP2A0A1C7CYW4 349 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 GOLGA8OA6NCC3 632 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ANKDD1BA6NHY2 528 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SAGE2PA6NJ88 616 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 HSPB2A8KAH6 182 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 GABRR3A8MPY1 467 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 C9JVG2 144 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 GOLGA8NF8WBI6 632 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 G3V3Y1 287 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 K7EQM0 130 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 LGALS8O00214 317 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 WWP2O00308 870 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SLC28A1O00337 649 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 COPEO14579 308 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 VCYO14598 125 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ANKRD28O15084 1053 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 LSM1O15116 133 aaKnown RBP2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SPINT2O43291 252 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 XRCC3O43542 346 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SCN2BO60939 215 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SMIM24O75264 130 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SNNO75324 88 aaPredicted RBP2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 RHBDL1O75783 438 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ATP6AP2O75787 350 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 OR2J2O76002 312 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 LRATO95237 230 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 NADKO95544 446 aaPredicted RBP2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 GPR75O95800 540 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 OTCP00480 354 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 IL3P08700 152 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SLC35G6P0C7Q6 338 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CT45A8P0DMV1 189 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CT45A9P0DMV2 189 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 MYL2P10916 166 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 RNH1P13489 461 aaKnown RBP2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ANXA8P13928 327 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 SRD5A1P18405 259 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 EFNA1P20827 205 aaPredicted RBP2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CXCR2P25025 360 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 IL12AP29459 219 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 FEN1P39748 380 aaKnown RBP2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 RFC3P40938 356 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ALDH3B1P43353 468 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ZFP36L2P47974 494 aaKnown RBP2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 EMDP50402 254 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 XKP51811 444 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 TDGF1P3P51864 188 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CNN1P51911 297 aaKnown RBP2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CCNG1P51959 295 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 DIO3P55073 304 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 RAB38P57729 211 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 OR4D2P58180 307 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 MAGOHP61326 146 aaKnown RBP2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 STXBP1P61764 594 aaKnown RBP2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CSNK2A1P68400 391 aaPredicted RBP2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 TNFRSF17Q02223 184 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 BST1Q10588 318 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 FOXF2Q12947 444 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 MFAP5Q13361 173 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CASP8Q14790 479 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 EXOSC7Q15024 291 aaKnown RBP2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 INPP5JQ15735 1006 aaPredicted RBP2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 HSPB2Q16082 182 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 NDUFA9Q16795 377 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 EXOC3L2Q2M3D2 409 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 EIF2S3LQ2VIR3 472 aaKnown RBP2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 KRT71Q3SY84 523 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 TMEM35AQ53FP2 167 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 TRMT12Q53H54 448 aaKnown RBP2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CT45A2Q5DJT8 189 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 XKR7Q5GH72 579 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ACER2Q5QJU3 275 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CEP85LQ5SZL2 805 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 FHL5Q5TD97 284 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 DDI2Q5TDH0 399 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 LGSNQ5TDP6 509 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 NDUFAF5Q5TEU4 345 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 ANXA8L1Q5VT79 327 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 DCAF12L2Q5VW00 463 aa2.29□□□□□ -2.04
TNFRSF1A-210ENST00000537842 CARD17Q5XLA6 110 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms