RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 A0A1B0GTQ1 180 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 TMEM72A0PK05 275 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 FLRT2O43155 660 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 GATBO75879 557 aaKnown RBP12.11□□□□□ -0.47
VPS33B-202ENST00000535906 UCHL1P09936 223 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 EPXP11678 715 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 GP1BBP13224 206 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 ATF1P18846 271 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 BTCP35070 178 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 P2RX1P51575 399 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 NANOS3P60323 173 aaKnown RBP12.11□□□□□ -0.47
VPS33B-202ENST00000535906 NR0B2Q15466 257 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 NKAIN1Q4KMZ8 207 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 CEP78Q5JTW2 689 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 RABEPKQ7Z6M1 372 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 ANKRD37Q7Z713 158 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 SLC25A36Q96CQ1 311 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 GON7Q9BXV9 100 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 MOKQ9UQ07 419 aa12.11□□□□□ -0.47
VPS33B-202ENST00000535906 TRAV36DV7A0A075B6V5 113 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 A0A087WV48 116 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 IGHV5-10-1A0A0J9YXX1 117 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 TVP23AA6NH52 213 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 C11orf98E9PRG8 122 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 UBL3O95164 117 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 ACY1Q03154 408 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 HSF2Q03933 536 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 MAB21L1Q13394 359 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 SQSTM1Q13501 440 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 SLC36A2Q495M3 483 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 EMC4Q5J8M3 183 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 OR5M10Q6IEU7 315 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 SLC16A9Q7RTY1 509 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 ADGRG3Q86Y34 549 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 PLCZ1Q86YW0 608 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 TIGD4Q8IY51 512 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 NFAM1Q8NET5 270 aaPredicted RBP12.1□□□□□ -0.47
VPS33B-202ENST00000535906 GRPEL2Q8TAA5 225 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 GPR119Q8TDV5 335 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 ORAI1Q96D31 301 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 GTPBP2Q9BX10 602 aaKnown RBP12.1□□□□□ -0.47
VPS33B-202ENST00000535906 SEMA4CQ9C0C4 833 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 TMED7-TICAM2A0A0A6YYA0 188 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 C2orf72A6NCS6 295 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 SUSD5O60279 629 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 SCRG1O75711 98 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 SLC25A12O75746 678 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 HEXBP07686 556 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 MMP15P51511 669 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 PITPNAQ00169 270 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 NTRK2Q16620 822 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 HLA-BQ31612 363 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 PMS2CLQ68D20 193 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 KRT74Q7RTS7 529 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 OVCH1Q7RTY7 1134 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 UBALD2Q8IYN6 164 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 RPS4Y2Q8TD47 263 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 HSD17B8Q92506 261 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 MRPL48Q96GC5 212 aaKnown RBP12.1□□□□□ -0.47
VPS33B-202ENST00000535906 SYT4Q9H2B2 425 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 PILRBQ9UKJ0 227 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 TMED7Q9Y3B3 224 aa12.1□□□□□ -0.47
VPS33B-202ENST00000535906 WDFY4Q6ZS81 3184 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 A0A0B4J203 849 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 A0A1W2PPC1 479 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 ARHGEF9O43307 516 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 NPIPB7O75200 414 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 ZFPL1O95159 310 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 GPANK1O95872 356 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 ANKRD34CP0C6C1 535 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 SNRPBP14678 240 aaKnown RBP12.09□□□□□ -0.47
VPS33B-202ENST00000535906 RPS27P42677 84 aaKnown RBP12.09□□□□□ -0.47
VPS33B-202ENST00000535906 MAGEB1P43366 347 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 SRP9P49458 86 aaKnown RBP12.09□□□□□ -0.47
VPS33B-202ENST00000535906 POLR2HP52434 150 aaKnown RBP12.09□□□□□ -0.47
VPS33B-202ENST00000535906 FBXW4P57775 412 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 UNQ9370/PRO34162Q6UXP9 181 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 OR4D9Q8NGE8 314 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 HAVCR2Q8TDQ0 301 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 YIPF5Q969M3 257 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 ADAD1Q96M93 576 aaKnown RBP12.09□□□□□ -0.47
VPS33B-202ENST00000535906 GUCD1Q96NT3 240 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 NPAS1Q99742 590 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 OR11A1Q9GZK7 315 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 BRD7Q9NPI1 651 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 A0A0A6YYJ9 748 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 ANKRD34BA5PLL1 514 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 PIN1P1O15428 100 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 GPRIN2O60269 458 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 RPP14O95059 124 aaKnown RBP12.09□□□□□ -0.47
VPS33B-202ENST00000535906 DHFRP00374 187 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 PLGP00747 810 aaPredicted RBP12.09□□□□□ -0.47
VPS33B-202ENST00000535906 PDGFBP01127 241 aaPredicted RBP12.09□□□□□ -0.47
VPS33B-202ENST00000535906 OR8G3PP0DMU2 310 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 COL28A1Q2UY09 1125 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 GPR139Q6DWJ6 353 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 CDC20BQ86Y33 519 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 PM20D2Q8IYS1 436 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 OR2T4Q8NH00 348 aa12.09□□□□□ -0.47
VPS33B-202ENST00000535906 PHYHIPQ92561 330 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms