RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 ZNF786Q8N393 782 aa11.48□□□□□ -0.57
CLSTN3-205ENST00000535452 OR1J2Q8NGS2 313 aa11.48□□□□□ -0.57
CLSTN3-205ENST00000535452 OR5J2Q8NH18 312 aa11.48□□□□□ -0.57
CLSTN3-205ENST00000535452 ZNF566Q969W8 418 aa11.48□□□□□ -0.57
CLSTN3-205ENST00000535452 MSI2Q96DH6 328 aaKnown RBP11.48□□□□□ -0.57
CLSTN3-205ENST00000535452 MCHR1Q99705 422 aa11.48□□□□□ -0.57
CLSTN3-205ENST00000535452 FOXB1Q99853 325 aa11.48□□□□□ -0.57
CLSTN3-205ENST00000535452 TMEM43Q9BTV4 400 aa11.48□□□□□ -0.57
CLSTN3-205ENST00000535452 C1orf198Q9H425 327 aa11.48□□□□□ -0.57
CLSTN3-205ENST00000535452 NOX3Q9HBY0 568 aa11.48□□□□□ -0.57
CLSTN3-205ENST00000535452 NANSQ9NR45 359 aa11.48□□□□□ -0.57
CLSTN3-205ENST00000535452 KLHL14Q9P2G3 628 aa11.48□□□□□ -0.57
CLSTN3-205ENST00000535452 STX18Q9P2W9 335 aaKnown RBP11.48□□□□□ -0.57
CLSTN3-205ENST00000535452 REV1Q9UBZ9 1251 aa11.48□□□□□ -0.57
CLSTN3-205ENST00000535452 SLC7A8Q9UHI5 535 aa11.48□□□□□ -0.57
CLSTN3-205ENST00000535452 CR1P17927 2039 aa11.48□□□□□ -0.57
CLSTN3-205ENST00000535452 A0A096LNT2 108 aa11.47□□□□□ -0.57
CLSTN3-205ENST00000535452 IGHV4-61A0A0C4DH41 118 aa11.47□□□□□ -0.57
CLSTN3-205ENST00000535452 VWC2LB2RUY7 222 aa11.47□□□□□ -0.57
CLSTN3-205ENST00000535452 MCIDASD6RGH6 385 aa11.47□□□□□ -0.57
CLSTN3-205ENST00000535452 TCF21O43680 179 aa11.47□□□□□ -0.57
CLSTN3-205ENST00000535452 FMO6PO60774 539 aa11.47□□□□□ -0.57
CLSTN3-205ENST00000535452 SEC14L2O76054 403 aa11.47□□□□□ -0.57
CLSTN3-205ENST00000535452 HLA-HP01893 362 aa11.47□□□□□ -0.57
CLSTN3-205ENST00000535452 OR8G3PP0DMU2 310 aa11.47□□□□□ -0.57
CLSTN3-205ENST00000535452 B4GALT1P15291 398 aa11.47□□□□□ -0.57
CLSTN3-205ENST00000535452 NR4A1P22736 598 aa11.47□□□□□ -0.57
CLSTN3-205ENST00000535452 IGFBP5P24593 272 aa11.47□□□□□ -0.57
CLSTN3-205ENST00000535452 CALCRP30988 508 aa11.47□□□□□ -0.57
CLSTN3-205ENST00000535452 GUCA1AP43080 201 aaPredicted RBP11.47□□□□□ -0.57
CLSTN3-205ENST00000535452 MRPL19P49406 292 aaKnown RBP11.47□□□□□ -0.57
CLSTN3-205ENST00000535452 ATP4BP51164 291 aa11.47□□□□□ -0.57
CLSTN3-205ENST00000535452 ZNF84P51523 738 aa11.47□□□□□ -0.57
CLSTN3-205ENST00000535452 RAB1AP62820 205 aa11.47□□□□□ -0.57
CLSTN3-205ENST00000535452 TEKQ02763 1124 aa11.47□□□□□ -0.57
CLSTN3-205ENST00000535452 SLC36A2Q495M3 483 aa11.47□□□□□ -0.57
CLSTN3-205ENST00000535452 PIWIL3Q7Z3Z3 882 aaKnown RBP11.47□□□□□ -0.57
CLSTN3-205ENST00000535452 PATL1Q86TB9 770 aaKnown RBP11.47□□□□□ -0.57
CLSTN3-205ENST00000535452 GLCCI1Q86VQ1 547 aa11.47□□□□□ -0.57
CLSTN3-205ENST00000535452 RFLNBQ8N5W9 214 aa11.47□□□□□ -0.57
CLSTN3-205ENST00000535452 MRPL24Q96A35 216 aaKnown RBP11.47□□□□□ -0.57
CLSTN3-205ENST00000535452 SNX18Q96RF0 628 aa11.47□□□□□ -0.57
CLSTN3-205ENST00000535452 SH3GL1Q99961 368 aa11.47□□□□□ -0.57
CLSTN3-205ENST00000535452 EMC6Q9BV81 110 aa11.47□□□□□ -0.57
CLSTN3-205ENST00000535452 PRR14Q9BWN1 585 aa11.47□□□□□ -0.57
CLSTN3-205ENST00000535452 CDH20Q9HBT6 801 aa11.47□□□□□ -0.57
CLSTN3-205ENST00000535452 B3GAT1Q9P2W7 334 aa11.47□□□□□ -0.57
CLSTN3-205ENST00000535452 DUSP13Q9UII6 198 aa11.47□□□□□ -0.57
CLSTN3-205ENST00000535452 TMEFF2Q9UIK5 374 aaPredicted RBP11.47□□□□□ -0.57
CLSTN3-205ENST00000535452 GRIP1Q9Y3R0 1128 aa11.47□□□□□ -0.57
CLSTN3-205ENST00000535452 A0A0B4J2E0 115 aa11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 IQCMA0A1B0GVH7 501 aa11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 A0A1B0GX12 115 aa11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 A0A1W2PRG6 482 aa11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 B4DSR2 109 aa11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 C11orf98E9PRG8 122 aa11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 TPD52L2O43399 206 aaKnown RBP11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 TRAF3IP2O43734 574 aaPredicted RBP11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 CHP2O43745 196 aa11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 IFNA14P01570 189 aa11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 CELA3BP08861 270 aa11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 ANPEPP15144 967 aa11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 CD247P20963 164 aa11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 DRD4P21917 467 aa11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 GIFP27352 417 aa11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 HTR2AP28223 471 aa11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 GLRXP35754 106 aa11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 GPR6P46095 362 aaPredicted RBP11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 GIPRP48546 466 aa11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 IDH3AP50213 366 aa11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 BIDP55957 195 aa11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 CLRN1P58418 232 aa11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 CR1LQ2VPA4 569 aa11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 TMEM154Q6P9G4 183 aa11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 LINGO2Q7L985 606 aa11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 MAVSQ7Z434 540 aa11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 NANOGNBQ7Z5D8 188 aa11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 DHDDSQ86SQ9 333 aa11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 TLCD1Q96CP7 247 aa11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 MPP4Q96JB8 637 aa11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 DOK1Q99704 481 aa11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 ZNF416Q9BWM5 594 aa11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 TPK1Q9H3S4 243 aa11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 MED29Q9NX70 200 aa11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 VAPAQ9P0L0 249 aa11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 SEC14L4Q9UDX3 406 aa11.46□□□□□ -0.57
CLSTN3-205ENST00000535452 SONP18583 2426 aaKnown RBP11.45□□□□□ -0.58
CLSTN3-205ENST00000535452 LRP5LA4QPB2 252 aa11.45□□□□□ -0.58
CLSTN3-205ENST00000535452 GMNCA6NCL1 334 aa11.45□□□□□ -0.58
CLSTN3-205ENST00000535452 CPSF4LA6NMK7 179 aaKnown RBP11.45□□□□□ -0.58
CLSTN3-205ENST00000535452 MGRN1O60291 552 aa11.45□□□□□ -0.58
CLSTN3-205ENST00000535452 BCL10O95999 233 aa11.45□□□□□ -0.58
CLSTN3-205ENST00000535452 IGHG1P01857 330 aa11.45□□□□□ -0.58
CLSTN3-205ENST00000535452 GPX2P18283 190 aa11.45□□□□□ -0.58
CLSTN3-205ENST00000535452 RAD52P43351 418 aa11.45□□□□□ -0.58
CLSTN3-205ENST00000535452 CDH12P55289 794 aa11.45□□□□□ -0.58
CLSTN3-205ENST00000535452 HGFACQ04756 655 aa11.45□□□□□ -0.58
CLSTN3-205ENST00000535452 NFYCQ13952 458 aa11.45□□□□□ -0.58
CLSTN3-205ENST00000535452 NPTX1Q15818 432 aa11.45□□□□□ -0.58
CLSTN3-205ENST00000535452 TBC1D28Q2M2D7 210 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms