RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 ASB10Q8WXI3 467 aa13.8□□□□□ -0.2
CTTN-215ENST00000533931 DOCK7Q96N67 2140 aa13.8□□□□□ -0.2
CTTN-215ENST00000533931 KATNB1Q9BVA0 655 aa13.8□□□□□ -0.2
CTTN-215ENST00000533931 POLDIP3Q9BY77 421 aaKnown RBP13.8□□□□□ -0.2
CTTN-215ENST00000533931 KCNJ16Q9NPI9 418 aa13.8□□□□□ -0.2
CTTN-215ENST00000533931 PAPOLBQ9NRJ5 636 aaKnown RBP13.8□□□□□ -0.2
CTTN-215ENST00000533931 ELOVL5Q9NYP7 299 aa13.8□□□□□ -0.2
CTTN-215ENST00000533931 REV1Q9UBZ9 1251 aa13.8□□□□□ -0.2
CTTN-215ENST00000533931 SLC35F4A4IF30 521 aa13.79□□□□□ -0.2
CTTN-215ENST00000533931 MCIDASD6RGH6 385 aa13.79□□□□□ -0.2
CTTN-215ENST00000533931 PYCARD-AS1I3L0S3 204 aa13.79□□□□□ -0.2
CTTN-215ENST00000533931 IGHG1P01857 330 aa13.79□□□□□ -0.2
CTTN-215ENST00000533931 POU2F1P14859 743 aa13.79□□□□□ -0.2
CTTN-215ENST00000533931 PRKACGP22612 351 aa13.79□□□□□ -0.2
CTTN-215ENST00000533931 SDHAP31040 664 aa13.79□□□□□ -0.2
CTTN-215ENST00000533931 NTF4P34130 210 aa13.79□□□□□ -0.2
CTTN-215ENST00000533931 PEX19P40855 299 aa13.79□□□□□ -0.2
CTTN-215ENST00000533931 ESRRGP62508 458 aa13.79□□□□□ -0.2
CTTN-215ENST00000533931 SRSF1Q07955 248 aaKnown RBP eCLIP13.79□□□□□ -0.27e-11■□□□□ 10.5
CTTN-215ENST00000533931 NIPAL3Q6P499 406 aa13.79□□□□□ -0.2
CTTN-215ENST00000533931 THSD4Q6ZMP0 1018 aa13.79□□□□□ -0.2
CTTN-215ENST00000533931 ADCK1Q86TW2 530 aa13.79□□□□□ -0.2
CTTN-215ENST00000533931 KIF18BQ86Y91 864 aa13.79□□□□□ -0.2
CTTN-215ENST00000533931 ARIH2OSQ8N7S6 290 aa13.79□□□□□ -0.2
CTTN-215ENST00000533931 ZNF519Q8TB69 540 aa13.79□□□□□ -0.2
CTTN-215ENST00000533931 ZNF566Q969W8 418 aa13.79□□□□□ -0.2
CTTN-215ENST00000533931 SNX18Q96RF0 628 aa13.79□□□□□ -0.2
CTTN-215ENST00000533931 USB1Q9BQ65 265 aaKnown RBP13.79□□□□□ -0.2
CTTN-215ENST00000533931 ALG12Q9BV10 488 aa13.79□□□□□ -0.2
CTTN-215ENST00000533931 MRPL13Q9BYD1 178 aaKnown RBP13.79□□□□□ -0.2
CTTN-215ENST00000533931 OR10A4Q9H209 315 aa13.79□□□□□ -0.2
CTTN-215ENST00000533931 SMURF2Q9HAU4 748 aa13.79□□□□□ -0.2
CTTN-215ENST00000533931 KRT84Q9NSB2 600 aa13.79□□□□□ -0.2
CTTN-215ENST00000533931 MED29Q9NX70 200 aa13.79□□□□□ -0.2
CTTN-215ENST00000533931 KLF2Q9Y5W3 355 aaPredicted RBP13.79□□□□□ -0.2
CTTN-215ENST00000533931 USP9XQ93008 2570 aaPredicted RBP13.79□□□□□ -0.2
CTTN-215ENST00000533931 EEF1E1-BLOC1S5C9J1V9 151 aa13.78□□□□□ -0.2
CTTN-215ENST00000533931 RPL36A-HNRNPH2H7BZ11 118 aa13.78□□□□□ -0.2
CTTN-215ENST00000533931 CASQ2O14958 399 aaPredicted RBP13.78□□□□□ -0.2
CTTN-215ENST00000533931 EEF1E1O43324 174 aaKnown RBP13.78□□□□□ -0.2
CTTN-215ENST00000533931 SMNDC1O75940 238 aaKnown RBP eCLIP13.78□□□□□ -0.2
CTTN-215ENST00000533931 BAG2O95816 211 aa13.78□□□□□ -0.2
CTTN-215ENST00000533931 TP53P04637 393 aaPredicted RBP13.78□□□□□ -0.2
CTTN-215ENST00000533931 ACADSP16219 412 aa13.78□□□□□ -0.2
CTTN-215ENST00000533931 SELENOPP49908 381 aa13.78□□□□□ -0.2
CTTN-215ENST00000533931 DAPP51397 102 aa13.78□□□□□ -0.2
CTTN-215ENST00000533931 ALDH3A2P51648 485 aa13.78□□□□□ -0.2
CTTN-215ENST00000533931 SH3BGRP55822 239 aaPredicted RBP13.78□□□□□ -0.2
CTTN-215ENST00000533931 BIDP55957 195 aa13.78□□□□□ -0.2
CTTN-215ENST00000533931 DAG1Q14118 895 aa13.78□□□□□ -0.2
CTTN-215ENST00000533931 HIST3H3Q16695 136 aa13.78□□□□□ -0.2
CTTN-215ENST00000533931 C20orf196Q8IYI0 205 aa13.78□□□□□ -0.2
CTTN-215ENST00000533931 GABRG1Q8N1C3 465 aa13.78□□□□□ -0.2
CTTN-215ENST00000533931 LNX2Q8N448 690 aa13.78□□□□□ -0.2
CTTN-215ENST00000533931 ZNF610Q8N9Z0 462 aa13.78□□□□□ -0.2
CTTN-215ENST00000533931 OR2T33Q8NG76 320 aa13.78□□□□□ -0.2
CTTN-215ENST00000533931 TEX47Q8TBZ9 253 aa13.78□□□□□ -0.2
CTTN-215ENST00000533931 RNASE6Q93091 150 aaKnown RBP13.78□□□□□ -0.2
CTTN-215ENST00000533931 EME1Q96AY2 570 aa13.78□□□□□ -0.2
CTTN-215ENST00000533931 TXNDC15Q96J42 360 aa13.78□□□□□ -0.2
CTTN-215ENST00000533931 SAMD8Q96LT4 415 aa13.78□□□□□ -0.2
CTTN-215ENST00000533931 TSPAN32Q96QS1 320 aa13.78□□□□□ -0.2
CTTN-215ENST00000533931 EGLN3Q9H6Z9 239 aa13.78□□□□□ -0.2
CTTN-215ENST00000533931 C12orf49Q9H741 205 aa13.78□□□□□ -0.2
CTTN-215ENST00000533931 RNPEPL1Q9HAU8 725 aa13.78□□□□□ -0.2
CTTN-215ENST00000533931 B3GAT2Q9NPZ5 323 aa13.78□□□□□ -0.2
CTTN-215ENST00000533931 GRHPRQ9UBQ7 328 aa13.78□□□□□ -0.2
CTTN-215ENST00000533931 ZNF346Q9UL40 294 aaKnown RBP13.78□□□□□ -0.2
CTTN-215ENST00000533931 MAGED1Q9Y5V3 778 aaPredicted RBP13.78□□□□□ -0.2
CTTN-215ENST00000533931 RELNP78509 3460 aa13.78□□□□□ -0.2
CTTN-215ENST00000533931 SAC3D1A6NKF1 404 aa13.77□□□□□ -0.21
CTTN-215ENST00000533931 PDLIM1O00151 329 aa13.77□□□□□ -0.21
CTTN-215ENST00000533931 BHLHE40O14503 412 aa13.77□□□□□ -0.21
CTTN-215ENST00000533931 MGRN1O60291 552 aa13.77□□□□□ -0.21
CTTN-215ENST00000533931 SERPINI2O75830 405 aa13.77□□□□□ -0.21
CTTN-215ENST00000533931 ALPLP05186 524 aa13.77□□□□□ -0.21
CTTN-215ENST00000533931 PGA4P0DJD7 388 aa13.77□□□□□ -0.21
CTTN-215ENST00000533931 PGA3P0DJD8 388 aa13.77□□□□□ -0.21
CTTN-215ENST00000533931 CDH2P19022 906 aaPredicted RBP13.77□□□□□ -0.21
CTTN-215ENST00000533931 PSMB1P20618 241 aaKnown RBP13.77□□□□□ -0.21
CTTN-215ENST00000533931 COX5AP20674 150 aa13.77□□□□□ -0.21
CTTN-215ENST00000533931 IGFBP5P24593 272 aa13.77□□□□□ -0.21
CTTN-215ENST00000533931 ZNF133P52736 654 aaPredicted RBP13.77□□□□□ -0.21
CTTN-215ENST00000533931 SORDQ00796 357 aa13.77□□□□□ -0.21
CTTN-215ENST00000533931 SLC36A3Q495N2 470 aa13.77□□□□□ -0.21
CTTN-215ENST00000533931 TSPO2Q5TGU0 170 aa13.77□□□□□ -0.21
CTTN-215ENST00000533931 ZNF474Q6S9Z5 364 aaPredicted RBP13.77□□□□□ -0.21
CTTN-215ENST00000533931 SSX8Q7RTT4 187 aa13.77□□□□□ -0.21
CTTN-215ENST00000533931 GPR137CQ8N3F9 429 aa13.77□□□□□ -0.21
CTTN-215ENST00000533931 PACRGLQ8N7B6 248 aa13.77□□□□□ -0.21
CTTN-215ENST00000533931 NOXO1Q8NFA2 376 aa13.77□□□□□ -0.21
CTTN-215ENST00000533931 OR8D4Q8NGM9 314 aa13.77□□□□□ -0.21
CTTN-215ENST00000533931 MAGEE2Q8TD90 523 aaPredicted RBP13.77□□□□□ -0.21
CTTN-215ENST00000533931 TMEM54Q969K7 222 aa13.77□□□□□ -0.21
CTTN-215ENST00000533931 ZNF775Q96BV0 537 aaPredicted RBP13.77□□□□□ -0.21
CTTN-215ENST00000533931 BOD1Q96IK1 185 aa13.77□□□□□ -0.21
CTTN-215ENST00000533931 ZNF570Q96NI8 536 aa13.77□□□□□ -0.21
CTTN-215ENST00000533931 RDH12Q96NR8 316 aa13.77□□□□□ -0.21
CTTN-215ENST00000533931 KCNK17Q96T54 332 aa13.77□□□□□ -0.21
CTTN-215ENST00000533931 CIB1Q99828 191 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms