RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 SLC2A1P11166 492 aa11.38□□□□□ -0.59
RAD50-209ENST00000533482 CD34P28906 385 aa11.38□□□□□ -0.59
RAD50-209ENST00000533482 PTGS2P35354 604 aa11.38□□□□□ -0.59
RAD50-209ENST00000533482 KIR2DL1P43626 348 aaPredicted RBP11.38□□□□□ -0.59
RAD50-209ENST00000533482 DGCR2P98153 550 aa11.38□□□□□ -0.59
RAD50-209ENST00000533482 RIN1Q13671 783 aa11.38□□□□□ -0.59
RAD50-209ENST00000533482 GPR176Q14439 515 aa11.38□□□□□ -0.59
RAD50-209ENST00000533482 GARNL3Q5VVW2 1013 aa11.38□□□□□ -0.59
RAD50-209ENST00000533482 OR5D18Q8NGL1 313 aa11.38□□□□□ -0.59
RAD50-209ENST00000533482 OR4C3Q8NH37 302 aa11.38□□□□□ -0.59
RAD50-209ENST00000533482 ST6GALNAC5Q9BVH7 336 aa11.38□□□□□ -0.59
RAD50-209ENST00000533482 EMC9Q9Y3B6 208 aa11.38□□□□□ -0.59
RAD50-209ENST00000533482 IGHV5-51A0A0C4DH38 117 aa11.38□□□□□ -0.59
RAD50-209ENST00000533482 TRABD2BA6NFA1 517 aa11.38□□□□□ -0.59
RAD50-209ENST00000533482 UBL3O95164 117 aa11.38□□□□□ -0.59
RAD50-209ENST00000533482 SRMP19623 302 aa11.38□□□□□ -0.59
RAD50-209ENST00000533482 PSMB1P20618 241 aaKnown RBP11.38□□□□□ -0.59
RAD50-209ENST00000533482 SELENBP1Q13228 472 aa11.38□□□□□ -0.59
RAD50-209ENST00000533482 MFSD13AQ14CX5 517 aa11.38□□□□□ -0.59
RAD50-209ENST00000533482 Q499Y3 187 aa11.38□□□□□ -0.59
RAD50-209ENST00000533482 BCORP1Q8N888 145 aa11.38□□□□□ -0.59
RAD50-209ENST00000533482 WDR34Q96EX3 536 aa11.38□□□□□ -0.59
RAD50-209ENST00000533482 NAA11Q9BSU3 229 aaPredicted RBP11.38□□□□□ -0.59
RAD50-209ENST00000533482 TSPAN10Q9H1Z9 355 aaPredicted RBP11.38□□□□□ -0.59
RAD50-209ENST00000533482 EPOPA6NHQ4 379 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 DSCR3O14972 297 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 NSA2O95478 260 aaKnown RBP11.37□□□□□ -0.59
RAD50-209ENST00000533482 CER1O95813 267 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 IGHA2P01877 340 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 IL9P15248 144 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 HMGA2P52926 109 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 EFR3AQ14156 821 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 C12orf73Q69YU5 71 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 C16orf47Q6ZP98 133 aaPredicted RBP11.37□□□□□ -0.59
RAD50-209ENST00000533482 ZNF767PQ75MW2 155 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 SLA2Q9H6Q3 261 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 OR7A10O76100 309 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 S100A6P06703 90 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 CCR5P51681 352 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 ZNF704Q6ZNC4 412 aaPredicted RBP11.37□□□□□ -0.59
RAD50-209ENST00000533482 SYT13Q7L8C5 426 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 KCTD20Q7Z5Y7 419 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 PLCZ1Q86YW0 608 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 OR8D4Q8NGM9 314 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 LILRB4Q8NHJ6 448 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 SCGB3A2Q96PL1 93 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 OR2A5Q96R48 311 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 RHBDD3Q9Y3P4 386 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 MIA3Q5JRA6 1907 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 ZNF850A8MQ14 1090 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 CENPBD1B2RD01 187 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 B4DXG7 233 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 HTR3BO95264 441 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 EVI2BP34910 448 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 ELAVL1Q15717 326 aaKnown RBP11.37□□□□□ -0.59
RAD50-209ENST00000533482 FAAP20Q6NZ36 180 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 UBE3DQ7Z6J8 389 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 TOMM40LQ969M1 308 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 SEC22CQ9BRL7 303 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 SMOC1Q9H4F8 434 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 ZNF160Q9HCG1 818 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 POMT2Q9UKY4 750 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 BRCA1P38398 1863 aaKnown RBP11.37□□□□□ -0.59
RAD50-209ENST00000533482 CDC42EP2O14613 210 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 ALOX12BO75342 701 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 SC5DO75845 299 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 ERCC1P07992 297 aaPredicted RBP11.37□□□□□ -0.59
RAD50-209ENST00000533482 LIMS3P0CW19 117 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 LIMS4P0CW20 117 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 ZNF16P17020 682 aaPredicted RBP11.37□□□□□ -0.59
RAD50-209ENST00000533482 SPI1P17947 270 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 HTR3AP46098 478 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 DCAF7P61962 342 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 TEKQ02763 1124 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 AIMP2Q13155 320 aaKnown RBP11.37□□□□□ -0.59
RAD50-209ENST00000533482 DMRTC1Q5HYR2 192 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 ZNF611Q8N823 705 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 OR56B4Q8NH76 319 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 NKX3-1Q99801 234 aaPredicted RBP11.37□□□□□ -0.59
RAD50-209ENST00000533482 MFFQ9GZY8 342 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 CTSFQ9UBX1 484 aa11.37□□□□□ -0.59
RAD50-209ENST00000533482 CGGBP1Q9UFW8 167 aaPredicted RBP11.37□□□□□ -0.59
RAD50-209ENST00000533482 A0A1B0GV50 99 aa11.36□□□□□ -0.59
RAD50-209ENST00000533482 ARRDC5A6NEK1 342 aa11.36□□□□□ -0.59
RAD50-209ENST00000533482 LMO7DNF2Z398 122 aa11.36□□□□□ -0.59
RAD50-209ENST00000533482 AKR7A3O95154 331 aa11.36□□□□□ -0.59
RAD50-209ENST00000533482 SIX6O95475 246 aa11.36□□□□□ -0.59
RAD50-209ENST00000533482 IGHV3-9P01782 118 aa11.36□□□□□ -0.59
RAD50-209ENST00000533482 EVX1P49640 407 aa11.36□□□□□ -0.59
RAD50-209ENST00000533482 BIDP55957 195 aa11.36□□□□□ -0.59
RAD50-209ENST00000533482 FAPQ12884 760 aa11.36□□□□□ -0.59
RAD50-209ENST00000533482 MANEAQ5SRI9 462 aa11.36□□□□□ -0.59
RAD50-209ENST00000533482 FAM198BQ6UWH4 519 aa11.36□□□□□ -0.59
RAD50-209ENST00000533482 SPEM1Q8N4L4 309 aa11.36□□□□□ -0.59
RAD50-209ENST00000533482 HOXB13Q92826 284 aaPredicted RBP11.36□□□□□ -0.59
RAD50-209ENST00000533482 SEC22AQ96IW7 307 aa11.36□□□□□ -0.59
RAD50-209ENST00000533482 CCNL2Q96S94 520 aaPredicted RBP11.36□□□□□ -0.59
RAD50-209ENST00000533482 SRRQ9GZT4 340 aa11.36□□□□□ -0.59
RAD50-209ENST00000533482 SLC25A19Q9HC21 320 aa11.36□□□□□ -0.59
RAD50-209ENST00000533482 PLSCR3Q9NRY6 295 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms