RNA–Protein interactions for RNA: ENST00000533162.1

PUF60-221, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-221ENST00000533162 CD40P25942 277 aa13.05□□□□□ -0.32
PUF60-221ENST00000533162 SLC9A3P48764 834 aa13.05□□□□□ -0.32
PUF60-221ENST00000533162 CLRN1P58418 232 aa13.05□□□□□ -0.32
PUF60-221ENST00000533162 ARF1P84077 181 aaKnown RBP13.05□□□□□ -0.32
PUF60-221ENST00000533162 CEACAM16Q2WEN9 425 aa13.05□□□□□ -0.32
PUF60-221ENST00000533162 TBRG1Q3YBR2 411 aa13.05□□□□□ -0.32
PUF60-221ENST00000533162 HIKESHIQ53FT3 197 aa13.05□□□□□ -0.32
PUF60-221ENST00000533162 MTX3Q5HYI7 312 aa13.05□□□□□ -0.32
PUF60-221ENST00000533162 MBOAT2Q6ZWT7 520 aa13.05□□□□□ -0.32
PUF60-221ENST00000533162 SLC46A3Q7Z3Q1 461 aa13.05□□□□□ -0.32
PUF60-221ENST00000533162 WDR31Q8NA23 367 aa13.05□□□□□ -0.32
PUF60-221ENST00000533162 BCL2L2Q92843 193 aaPredicted RBP13.05□□□□□ -0.32
PUF60-221ENST00000533162 TXNDC15Q96J42 360 aa13.05□□□□□ -0.32
PUF60-221ENST00000533162 CXXC4Q9H2H0 198 aa13.05□□□□□ -0.32
PUF60-221ENST00000533162 NMNAT1Q9HAN9 279 aaPredicted RBP13.05□□□□□ -0.32
PUF60-221ENST00000533162 A0A096LPE4 126 aa13.04□□□□□ -0.32
PUF60-221ENST00000533162 A0A1W2PPR1 153 aa13.04□□□□□ -0.32
PUF60-221ENST00000533162 A0A1W2PPZ6 126 aa13.04□□□□□ -0.32
PUF60-221ENST00000533162 A0A1W2PRQ8 180 aa13.04□□□□□ -0.32
PUF60-221ENST00000533162 VSTM5A8MXK1 200 aa13.04□□□□□ -0.32
PUF60-221ENST00000533162 EFCAB9A8MZ26 197 aa13.04□□□□□ -0.32
PUF60-221ENST00000533162 J3KTA2 159 aa13.04□□□□□ -0.32
PUF60-221ENST00000533162 CAPZA2P47755 286 aa13.04□□□□□ -0.32
PUF60-221ENST00000533162 CDH11P55287 796 aa13.04□□□□□ -0.32
PUF60-221ENST00000533162 FOXG1P55316 489 aaPredicted RBP13.04□□□□□ -0.32
PUF60-221ENST00000533162 PRKCDQ05655 676 aa13.04□□□□□ -0.32
PUF60-221ENST00000533162 RPL18Q07020 188 aaKnown RBP13.04□□□□□ -0.32
PUF60-221ENST00000533162 LGALS3BPQ08380 585 aa13.04□□□□□ -0.32
PUF60-221ENST00000533162 DGCR6Q14129 220 aa13.04□□□□□ -0.32
PUF60-221ENST00000533162 FXNQ16595 210 aa13.04□□□□□ -0.32
PUF60-221ENST00000533162 C3orf36Q3SXR2 165 aa13.04□□□□□ -0.32
PUF60-221ENST00000533162 SHEQ5VZ18 495 aa13.04□□□□□ -0.32
PUF60-221ENST00000533162 OAFQ86UD1 273 aa13.04□□□□□ -0.32
PUF60-221ENST00000533162 LRRC75A-AS1Q8N1F1 130 aa13.04□□□□□ -0.32
PUF60-221ENST00000533162 FAM169BQ8N8A8 192 aa13.04□□□□□ -0.32
PUF60-221ENST00000533162 FAM156AQ8NDB6 213 aa13.04□□□□□ -0.32
PUF60-221ENST00000533162 SMAP2Q8WU79 429 aaPredicted RBP13.04□□□□□ -0.32
PUF60-221ENST00000533162 ZNF347Q96SE7 839 aa13.04□□□□□ -0.32
PUF60-221ENST00000533162 C1QTNF6Q9BXI9 259 aa13.04□□□□□ -0.32
PUF60-221ENST00000533162 C1orf21Q9H246 121 aa13.04□□□□□ -0.32
PUF60-221ENST00000533162 DENND2DQ9H6A0 471 aaPredicted RBP13.04□□□□□ -0.32
PUF60-221ENST00000533162 C20orf141Q9NUB4 165 aa13.04□□□□□ -0.32
PUF60-221ENST00000533162 CISD1Q9NZ45 108 aaKnown RBP13.04□□□□□ -0.32
PUF60-221ENST00000533162 GLTPQ9NZD2 209 aa13.04□□□□□ -0.32
PUF60-221ENST00000533162 PRPF19Q9UMS4 504 aaKnown RBP13.04□□□□□ -0.32
PUF60-221ENST00000533162 PDZD2O15018 2839 aa13.03□□□□□ -0.32
PUF60-221ENST00000533162 ARPC2O15144 300 aa13.03□□□□□ -0.32
PUF60-221ENST00000533162 MGRN1O60291 552 aa13.03□□□□□ -0.32
PUF60-221ENST00000533162 FARS2O95363 451 aaKnown RBP13.03□□□□□ -0.32
PUF60-221ENST00000533162 PLAUP00749 431 aa13.03□□□□□ -0.32
PUF60-221ENST00000533162 CRYAAP02489 173 aa13.03□□□□□ -0.32
PUF60-221ENST00000533162 FABP3P05413 133 aa13.03□□□□□ -0.32
PUF60-221ENST00000533162 BMP4P12644 408 aa13.03□□□□□ -0.32
PUF60-221ENST00000533162 ARR3P36575 388 aa13.03□□□□□ -0.32
PUF60-221ENST00000533162 IFNGR2P38484 337 aa13.03□□□□□ -0.32
PUF60-221ENST00000533162 AQP2P41181 271 aa13.03□□□□□ -0.32
PUF60-221ENST00000533162 GUCA1AP43080 201 aaPredicted RBP13.03□□□□□ -0.32
PUF60-221ENST00000533162 ZNF84P51523 738 aa13.03□□□□□ -0.32
PUF60-221ENST00000533162 RPS4XP62701 263 aaKnown RBP13.03□□□□□ -0.32
PUF60-221ENST00000533162 TESK1Q15569 626 aa13.03□□□□□ -0.32
PUF60-221ENST00000533162 ALG10Q5BKT4 473 aa13.03□□□□□ -0.32
PUF60-221ENST00000533162 FGD3Q5JSP0 725 aa13.03□□□□□ -0.32
PUF60-221ENST00000533162 FAM205BPQ63HN1 556 aa13.03□□□□□ -0.32
PUF60-221ENST00000533162 ZNF813Q6ZN06 617 aa13.03□□□□□ -0.32
PUF60-221ENST00000533162 TRPM8Q7Z2W7 1104 aa13.03□□□□□ -0.32
PUF60-221ENST00000533162 PIWIL3Q7Z3Z3 882 aaKnown RBP13.03□□□□□ -0.32
PUF60-221ENST00000533162 LSRQ86X29 649 aaPredicted RBP13.03□□□□□ -0.32
PUF60-221ENST00000533162 NRMQ8IXM6 262 aa13.03□□□□□ -0.32
PUF60-221ENST00000533162 RBM15BQ8NDT2 890 aaKnown RBP13.03□□□□□ -0.32
PUF60-221ENST00000533162 IL17RDQ8NFM7 739 aa13.03□□□□□ -0.32
PUF60-221ENST00000533162 FNDC8Q8TC99 324 aa13.03□□□□□ -0.32
PUF60-221ENST00000533162 GTPBP3Q969Y2 492 aaKnown RBP13.03□□□□□ -0.32
PUF60-221ENST00000533162 TRMT61AQ96FX7 289 aaKnown RBP13.03□□□□□ -0.32
PUF60-221ENST00000533162 SLC38A2Q96QD8 506 aa13.03□□□□□ -0.32
PUF60-221ENST00000533162 NPAP1Q9NZP6 1156 aa13.03□□□□□ -0.32
PUF60-221ENST00000533162 NDUFAF4Q9P032 175 aa13.03□□□□□ -0.32
PUF60-221ENST00000533162 FBXL3Q9UKT7 428 aa13.03□□□□□ -0.32
PUF60-221ENST00000533162 AURKCQ9UQB9 309 aa13.03□□□□□ -0.32
PUF60-221ENST00000533162 HIF3AQ9Y2N7 669 aa13.03□□□□□ -0.32
PUF60-221ENST00000533162 CSMD1Q96PZ7 3565 aa13.02□□□□□ -0.32
PUF60-221ENST00000533162 NPIPB13A6NJU9 1138 aa13.02□□□□□ -0.33
PUF60-221ENST00000533162 NPIPB4C9JG80 1138 aa13.02□□□□□ -0.33
PUF60-221ENST00000533162 FFAR1O14842 300 aa13.02□□□□□ -0.33
PUF60-221ENST00000533162 F13BP05160 661 aa13.02□□□□□ -0.33
PUF60-221ENST00000533162 NKX6-1P78426 367 aaPredicted RBP13.02□□□□□ -0.33
PUF60-221ENST00000533162 AGAP6Q5VW22 663 aa13.02□□□□□ -0.33
PUF60-221ENST00000533162 SEZ6L2Q6UXD5 910 aa13.02□□□□□ -0.33
PUF60-221ENST00000533162 LINGO2Q7L985 606 aa13.02□□□□□ -0.33
PUF60-221ENST00000533162 DPPA2Q7Z7J5 298 aa13.02□□□□□ -0.33
PUF60-221ENST00000533162 DHFR2Q86XF0 187 aa13.02□□□□□ -0.33
PUF60-221ENST00000533162 KBTBD8Q8NFY9 601 aa13.02□□□□□ -0.33
PUF60-221ENST00000533162 TMEM54Q969K7 222 aa13.02□□□□□ -0.33
PUF60-221ENST00000533162 LRGUKQ96M69 825 aa13.02□□□□□ -0.33
PUF60-221ENST00000533162 FOXB1Q99853 325 aa13.02□□□□□ -0.33
PUF60-221ENST00000533162 KATNB1Q9BVA0 655 aa13.02□□□□□ -0.33
PUF60-221ENST00000533162 TXNIPQ9H3M7 391 aa13.02□□□□□ -0.33
PUF60-221ENST00000533162 ACTR3BQ9P1U1 418 aa13.02□□□□□ -0.33
PUF60-221ENST00000533162 TMCC3Q9ULS5 477 aa13.02□□□□□ -0.33
PUF60-221ENST00000533162 LAMP3Q9UQV4 416 aa13.02□□□□□ -0.33
PUF60-221ENST00000533162 ATP23Q9Y6H3 246 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms