RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 LINC00114Q6XXX2 140 aa9.99□□□□□ -0.81
TRAPPC4-213ENST00000533149 WDR88Q6ZMY6 472 aa9.99□□□□□ -0.81
TRAPPC4-213ENST00000533149 IL17RELQ6ZVW7 336 aa9.99□□□□□ -0.81
TRAPPC4-213ENST00000533149 ZER1Q7Z7L7 766 aa9.99□□□□□ -0.81
TRAPPC4-213ENST00000533149 DTX2Q86UW9 622 aa9.99□□□□□ -0.81
TRAPPC4-213ENST00000533149 OR4K5Q8NGD3 323 aa9.99□□□□□ -0.81
TRAPPC4-213ENST00000533149 OR6K3Q8NGY3 331 aa9.99□□□□□ -0.81
TRAPPC4-213ENST00000533149 ZNF563Q8TA94 476 aa9.99□□□□□ -0.81
TRAPPC4-213ENST00000533149 FNDC9Q8TBE3 224 aa9.99□□□□□ -0.81
TRAPPC4-213ENST00000533149 TMEM255BQ8WV15 326 aa9.99□□□□□ -0.81
TRAPPC4-213ENST00000533149 ACOT11Q8WXI4 607 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC4-213ENST00000533149 PSD2Q9BQI7 771 aa9.99□□□□□ -0.81
TRAPPC4-213ENST00000533149 HHATLQ9HCP6 504 aa9.99□□□□□ -0.81
TRAPPC4-213ENST00000533149 SMPD3Q9NY59 655 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC4-213ENST00000533149 SELENONQ9NZV5 590 aa9.99□□□□□ -0.81
TRAPPC4-213ENST00000533149 KIF17Q9P2E2 1029 aa9.99□□□□□ -0.81
TRAPPC4-213ENST00000533149 MGAT4BQ9UQ53 548 aa9.99□□□□□ -0.81
TRAPPC4-213ENST00000533149 B3GALT5Q9Y2C3 310 aa9.99□□□□□ -0.81
TRAPPC4-213ENST00000533149 ARRDC5A6NEK1 342 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 B4DXG7 233 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 LINC01387J3KSC0 135 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 CHP2O43745 196 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 ZIC3O60481 467 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 CD8AP01732 235 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 PSMB1P20618 241 aaKnown RBP9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 IL11P20809 199 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 IFNGR2P38484 337 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 SLC1A3P43003 542 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 RAD23AP54725 363 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 SUMO3P55854 103 aaPredicted RBP9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 CBFBQ13951 182 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 PON3Q15166 354 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 QPRTQ15274 297 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 TAF11Q15544 211 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 AGAP6Q5VW22 663 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 PGBD2Q6P3X8 592 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 MBOAT2Q6ZWT7 520 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 GALNT5Q7Z7M9 940 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 LSRQ86X29 649 aaPredicted RBP9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 RNF113BQ8IZP6 322 aaKnown RBP9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 DEPDC4Q8N2C3 294 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 DHRSXQ8N5I4 330 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 C3orf56Q8N813 242 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 AQP11Q8NBQ7 271 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 STEAP2Q8NFT2 490 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 OR2M3Q8NG83 312 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 GNPDA2Q8TDQ7 276 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 TMEM239Q8WW34 195 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 FAM168AQ92567 244 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 NEUROG1Q92886 237 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 C3orf49Q96BT1 292 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 MPP4Q96JB8 637 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 NIPSNAP1Q9BPW8 284 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 HDHD5Q9BXW7 423 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 TOR3AQ9H497 397 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 ZNF556Q9HAH1 456 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 FBXL2Q9UKC9 423 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 ORC6Q9Y5N6 252 aa9.98□□□□□ -0.81
TRAPPC4-213ENST00000533149 MEGF8Q7Z7M0 2845 aa9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 A0A087WUJ7 227 aa9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 LOC100289279A0A1B0GTE1 492 aa9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 PIP5K1CO60331 668 aa9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 PLGP00747 810 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 CSF3P09919 207 aa9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 PNMTP11086 282 aa9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 TACR3P29371 465 aa9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 POLR2IP36954 125 aaKnown RBP9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 RBM34P42696 430 aaKnown RBP9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 UGT2B15P54855 530 aa9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 CTBP2P56545 445 aa9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 RPS3AP61247 264 aaKnown RBP9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 MERTKQ12866 999 aa9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 RFX4Q33E94 735 aa9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 SWT1Q5T5J6 900 aaKnown RBP9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 C1orf94Q6P1W5 598 aa9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 TTC33Q6PID6 262 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 ATG4DQ86TL0 474 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 NRMQ8IXM6 262 aa9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 FADS6Q8N9I5 356 aa9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 OR4K17Q8NGC6 315 aa9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 PIGXQ8TBF5 258 aa9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 ZFAND2BQ8WV99 257 aa9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 CYGBQ8WWM9 190 aa9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 TFAP2CQ92754 450 aa9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 C1orf159Q96HA4 380 aa9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 GMPPAQ96IJ6 420 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 RDH12Q96NR8 316 aa9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 MBOAT4Q96T53 435 aa9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 GPA33Q99795 319 aa9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 DGCR6LQ9BY27 220 aa9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 PAPOLBQ9NRJ5 636 aaKnown RBP9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 KRT84Q9NSB2 600 aa9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 CISD1Q9NZ45 108 aaKnown RBP9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 RAB26Q9ULW5 256 aa9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 MED31Q9Y3C7 131 aa9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 AP4B1Q9Y6B7 739 aa9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 DYSFO75923 2080 aa9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 FREM1Q5H8C1 2179 aa9.97□□□□□ -0.81
TRAPPC4-213ENST00000533149 YLPM1P49750 1951 aaKnown RBP9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms