RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 TUBA8Q9NY65 449 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-230ENST00000532245 GSKIPQ9P0R6 139 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 SPTBN2O15020 2390 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 C5orf49A4QMS7 147 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 LRRC30A6NM36 301 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 RBBP9O75884 186 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 CNR1P21554 472 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 FPR3P25089 353 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 EIF2S3P41091 472 aaKnown RBP7.25□□□□□ -1.25
CTNND1-230ENST00000532245 RGS19P49795 217 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 MECP2P51608 486 aaKnown RBP7.25□□□□□ -1.25
CTNND1-230ENST00000532245 ART1P52961 327 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 MTCP1P56278 107 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 TUBA1BP68363 451 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 TUBA4AP68366 448 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 PRICKLE4Q2TBC4 344 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 TUBA1AQ71U36 451 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 TMEM151AQ8N4L1 468 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 OR5D18Q8NGL1 313 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 TBC1D15Q8TC07 691 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 VWCEQ96DN2 955 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 TIMD4Q96H15 378 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 OXGR1Q96P68 337 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 LRFN3Q9BTN0 628 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 EGLN1Q9GZT9 426 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 NUP50Q9UKX7 468 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 EP300Q09472 2414 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-230ENST00000532245 A0A0X1KG70 313 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 A0A1W2PR80 420 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 SOCS6O14544 535 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 TBXA2RP21731 343 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 PEBP1P30086 187 aaKnown RBP7.25□□□□□ -1.25
CTNND1-230ENST00000532245 RBM34P42696 430 aaKnown RBP7.25□□□□□ -1.25
CTNND1-230ENST00000532245 DAPP51397 102 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 P2RY14Q15391 338 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 PLAG1Q6DJT9 500 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 BCDIN3DQ7Z5W3 292 aaKnown RBP7.25□□□□□ -1.25
CTNND1-230ENST00000532245 TMEM99Q8N816 258 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 GALNT11Q8NCW6 608 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 EXTL1Q92935 676 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 ALKBH3Q96Q83 286 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-230ENST00000532245 NIPSNAP1Q9BPW8 284 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 WDR76Q9H967 626 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 ACOT13Q9NPJ3 140 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 ZNF346Q9UL40 294 aaKnown RBP7.25□□□□□ -1.25
CTNND1-230ENST00000532245 NOP16Q9Y3C1 178 aaKnown RBP7.25□□□□□ -1.25
CTNND1-230ENST00000532245 AHCYL1O43865 530 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 CT62P0C5K7 136 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 B4GALT1P15291 398 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 MSR1P21757 451 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 HLCSP50747 726 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 AGERQ15109 404 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 C3AR1Q16581 482 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 MEP1BQ16820 701 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 ZNF404Q494X3 552 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 NHSL2Q5HYW2 709 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-230ENST00000532245 NPSR1Q6W5P4 371 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 SLC15A4Q8N697 577 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 OR13C9Q8NGT0 318 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 OR4C3Q8NH37 302 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 RFT1Q96AA3 541 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 BOD1Q96IK1 185 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 UFSP2Q9NUQ7 469 aa7.25□□□□□ -1.25
CTNND1-230ENST00000532245 MRPL15Q9P015 296 aaKnown RBP7.25□□□□□ -1.25
CTNND1-230ENST00000532245 PCYT1BQ9Y5K3 369 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-230ENST00000532245 TPRP12270 2363 aaKnown RBP7.25□□□□□ -1.25
CTNND1-230ENST00000532245 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.24□□□□□ -1.25
CTNND1-230ENST00000532245 P2RY10O00398 339 aa7.24□□□□□ -1.25
CTNND1-230ENST00000532245 ORC5O43913 435 aa7.24□□□□□ -1.25
CTNND1-230ENST00000532245 SELENOFO60613 162 aa7.24□□□□□ -1.25
CTNND1-230ENST00000532245 FZD5Q13467 585 aa7.24□□□□□ -1.25
CTNND1-230ENST00000532245 TUBA3CQ13748 450 aa7.24□□□□□ -1.25
CTNND1-230ENST00000532245 ALKBH6Q3KRA9 238 aa7.24□□□□□ -1.25
CTNND1-230ENST00000532245 OTPQ5XKR4 325 aa7.24□□□□□ -1.25
CTNND1-230ENST00000532245 TMEM211Q6ICI0 200 aa7.24□□□□□ -1.25
CTNND1-230ENST00000532245 CORO6Q6QEF8 472 aa7.24□□□□□ -1.25
CTNND1-230ENST00000532245 KANSL1Q7Z3B3 1105 aa7.24□□□□□ -1.25
CTNND1-230ENST00000532245 TMEM200AQ86VY9 491 aa7.24□□□□□ -1.25
CTNND1-230ENST00000532245 AKAP1Q92667 903 aaKnown RBP eCLIP7.24□□□□□ -1.257e-7■□□□□ 11.3
CTNND1-230ENST00000532245 ZNF501Q96CX3 271 aaPredicted RBP7.24□□□□□ -1.25
CTNND1-230ENST00000532245 GIMAP5Q96F15 307 aa7.24□□□□□ -1.25
CTNND1-230ENST00000532245 FUZQ9BT04 418 aa7.24□□□□□ -1.25
CTNND1-230ENST00000532245 ST6GALNAC5Q9BVH7 336 aa7.24□□□□□ -1.25
CTNND1-230ENST00000532245 ZNF225Q9UK10 706 aa7.24□□□□□ -1.25
CTNND1-230ENST00000532245 SCN5AQ14524 2016 aa7.24□□□□□ -1.25
CTNND1-230ENST00000532245 SPTA1P02549 2419 aa7.24□□□□□ -1.25
CTNND1-230ENST00000532245 TRAV18A0A075B6X5 111 aa7.24□□□□□ -1.25
CTNND1-230ENST00000532245 A0A1W2PPV9 198 aa7.24□□□□□ -1.25
CTNND1-230ENST00000532245 TFPTP0C1Z6 253 aa7.24□□□□□ -1.25
CTNND1-230ENST00000532245 ARRB2P32121 409 aa7.24□□□□□ -1.25
CTNND1-230ENST00000532245 MAGEA5P43359 124 aa7.24□□□□□ -1.25
CTNND1-230ENST00000532245 FXYD4P59646 89 aa7.24□□□□□ -1.25
CTNND1-230ENST00000532245 SEC61A1P61619 476 aaKnown RBP7.24□□□□□ -1.25
CTNND1-230ENST00000532245 ZNF117Q03924 483 aa7.24□□□□□ -1.25
CTNND1-230ENST00000532245 RPL18Q07020 188 aaKnown RBP7.24□□□□□ -1.25
CTNND1-230ENST00000532245 BLMHQ13867 455 aa7.24□□□□□ -1.25
CTNND1-230ENST00000532245 CDK10Q15131 360 aa7.24□□□□□ -1.25
CTNND1-230ENST00000532245 ACSM3Q53FZ2 586 aa7.24□□□□□ -1.25
CTNND1-230ENST00000532245 ZNF628Q5EBL2 1059 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms