RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 FAM109AQ8N4B1 249 aa12.91□□□□□ -0.34
TTC39A-216ENST00000530004 ZNF420Q8TAQ5 688 aaPredicted RBP12.91□□□□□ -0.34
TTC39A-216ENST00000530004 DTNBP1Q96EV8 351 aa12.91□□□□□ -0.34
TTC39A-216ENST00000530004 FUNDC2Q9BWH2 189 aa12.91□□□□□ -0.34
TTC39A-216ENST00000530004 CHCHD3Q9NX63 227 aaKnown RBP12.91□□□□□ -0.34
TTC39A-216ENST00000530004 EXOSC1Q9Y3B2 195 aaKnown RBP12.91□□□□□ -0.34
TTC39A-216ENST00000530004 MRPS18CQ9Y3D5 142 aaKnown RBP12.91□□□□□ -0.34
TTC39A-216ENST00000530004 TFECO14948 347 aaPredicted RBP12.9□□□□□ -0.34
TTC39A-216ENST00000530004 MYL12BO14950 172 aa12.9□□□□□ -0.34
TTC39A-216ENST00000530004 ATXN7O15265 892 aaPredicted RBP12.9□□□□□ -0.34
TTC39A-216ENST00000530004 NOL3O60936 208 aaKnown RBP12.9□□□□□ -0.34
TTC39A-216ENST00000530004 TRAPPC6AO75865 159 aa12.9□□□□□ -0.34
TTC39A-216ENST00000530004 HPNP05981 417 aa12.9□□□□□ -0.34
TTC39A-216ENST00000530004 CELA3AP09093 270 aa12.9□□□□□ -0.34
TTC39A-216ENST00000530004 CLK1P49759 484 aaKnown RBP12.9□□□□□ -0.34
TTC39A-216ENST00000530004 PUDPQ08623 228 aa12.9□□□□□ -0.34
TTC39A-216ENST00000530004 TMEM176BQ3YBM2 270 aaPredicted RBP12.9□□□□□ -0.34
TTC39A-216ENST00000530004 YRDCQ86U90 279 aaKnown RBP12.9□□□□□ -0.34
TTC39A-216ENST00000530004 KDM8Q8N371 416 aa12.9□□□□□ -0.34
TTC39A-216ENST00000530004 NANOGP1Q8N7R0 232 aa12.9□□□□□ -0.34
TTC39A-216ENST00000530004 FAM83FQ8NEG4 500 aaPredicted RBP12.9□□□□□ -0.34
TTC39A-216ENST00000530004 PROKR2Q8NFJ6 384 aa12.9□□□□□ -0.34
TTC39A-216ENST00000530004 PIGQQ9BRB3 760 aa12.9□□□□□ -0.34
TTC39A-216ENST00000530004 OR2B2Q9GZK3 357 aa12.9□□□□□ -0.34
TTC39A-216ENST00000530004 ZDHHC11Q9H8X9 412 aa12.9□□□□□ -0.34
TTC39A-216ENST00000530004 CHST11Q9NPF2 352 aa12.9□□□□□ -0.34
TTC39A-216ENST00000530004 ASB6Q9NWX5 421 aa12.9□□□□□ -0.34
TTC39A-216ENST00000530004 TNFRSF10DQ9UBN6 386 aa12.9□□□□□ -0.34
TTC39A-216ENST00000530004 HDGFL3Q9Y3E1 203 aa12.9□□□□□ -0.34
TTC39A-216ENST00000530004 EPG5Q9HCE0 2579 aa12.9□□□□□ -0.34
TTC39A-216ENST00000530004 MS4A18H0YCH9 400 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 ZNF701M0R085 212 aaPredicted RBP12.89□□□□□ -0.35
TTC39A-216ENST00000530004 FZD7O75084 574 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 AKR7A3O95154 331 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 CRYABP02511 175 aaKnown RBP12.89□□□□□ -0.35
TTC39A-216ENST00000530004 MRPL3P09001 348 aaKnown RBP12.89□□□□□ -0.35
TTC39A-216ENST00000530004 HSMCR30P0CW71 290 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 OR2B6P58173 313 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 ZP4Q12836 540 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 SLC10A1Q14973 349 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 ACKR1Q16570 336 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 MS4A18Q3C1V0 323 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 FAM180AQ6UWF9 173 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 OR51L1Q8NGJ5 315 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 OR14L1PQ8NHC6 308 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 C12orf43Q96C57 262 aaKnown RBP12.89□□□□□ -0.35
TTC39A-216ENST00000530004 YIPF6Q96EC8 236 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 COG8Q96MW5 612 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 NMNAT2Q9BZQ4 307 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 YIPF3Q9GZM5 350 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 TXNIPQ9H3M7 391 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 ACKR4Q9NPB9 350 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 B3GALT5Q9Y2C3 310 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 LSM2Q9Y333 95 aaKnown RBP12.89□□□□□ -0.35
TTC39A-216ENST00000530004 PIEZO2Q9H5I5 2752 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 H3BMQ9 156 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 H7C1C5 153 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 J3QRE1 110 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 ARHGEF9O43307 516 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 IGHMP01871 453 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 IGHA1P01876 353 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 SPI1P17947 270 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 LIPAP38571 399 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 TMBIM6P55061 237 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 RPL27P61353 136 aaKnown RBP12.89□□□□□ -0.35
TTC39A-216ENST00000530004 LCN6P62502 163 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 LGALS3BPQ08380 585 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 DOC2BQ14184 412 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 SPHARQ15513 63 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 ARMCX4Q5H9R4 360 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 WIPI1Q5MNZ9 446 aaPredicted RBP12.89□□□□□ -0.35
TTC39A-216ENST00000530004 SIAH3Q8IW03 269 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 CISD2Q8N5K1 135 aaKnown RBP12.89□□□□□ -0.35
TTC39A-216ENST00000530004 ARIH2OSQ8N7S6 290 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 SMPDL3BQ92485 455 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 ZMYND19Q96E35 227 aaPredicted RBP12.89□□□□□ -0.35
TTC39A-216ENST00000530004 MGLLQ99685 303 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 DOK1Q99704 481 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 RPRD1BQ9NQG5 326 aaKnown RBP12.89□□□□□ -0.35
TTC39A-216ENST00000530004 HAO2Q9NYQ3 351 aa12.89□□□□□ -0.35
TTC39A-216ENST00000530004 A0A1W2PRG6 482 aa12.88□□□□□ -0.35
TTC39A-216ENST00000530004 XKRYO14609 159 aa12.88□□□□□ -0.35
TTC39A-216ENST00000530004 RENP00797 406 aa12.88□□□□□ -0.35
TTC39A-216ENST00000530004 SBK2P0C263 348 aa12.88□□□□□ -0.35
TTC39A-216ENST00000530004 LIMS3P0CW19 117 aa12.88□□□□□ -0.35
TTC39A-216ENST00000530004 LIMS4P0CW20 117 aa12.88□□□□□ -0.35
TTC39A-216ENST00000530004 HLA-DOBP13765 273 aa12.88□□□□□ -0.35
TTC39A-216ENST00000530004 CD36P16671 472 aa12.88□□□□□ -0.35
TTC39A-216ENST00000530004 ACVR1BP36896 505 aa12.88□□□□□ -0.35
TTC39A-216ENST00000530004 TGFBR2P37173 567 aa12.88□□□□□ -0.35
TTC39A-216ENST00000530004 DIO1P49895 249 aa12.88□□□□□ -0.35
TTC39A-216ENST00000530004 SLC25A1P53007 311 aa12.88□□□□□ -0.35
TTC39A-216ENST00000530004 B3GALT5-AS1P59052 145 aa12.88□□□□□ -0.35
TTC39A-216ENST00000530004 C1DQ13901 141 aaKnown RBP12.88□□□□□ -0.35
TTC39A-216ENST00000530004 PON3Q15166 354 aa12.88□□□□□ -0.35
TTC39A-216ENST00000530004 SLC35D3Q5M8T2 416 aa12.88□□□□□ -0.35
TTC39A-216ENST00000530004 LCN1P1Q5VSP4 162 aa12.88□□□□□ -0.35
TTC39A-216ENST00000530004 LHFPL3Q86UP9 236 aa12.88□□□□□ -0.35
TTC39A-216ENST00000530004 ANKRD13BQ86YJ7 626 aa12.88□□□□□ -0.35
TTC39A-216ENST00000530004 TMEM99Q8N816 258 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms