RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 RBX1P62877 108 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 HPCAP84074 193 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 EWSR1Q01844 656 aaKnown RBP eCLIP2.74□□□□□ -1.97
CD44-229ENST00000528672 EIF4EBP2Q13542 120 aaPredicted RBP2.74□□□□□ -1.97
CD44-229ENST00000528672 SERTAD2Q14140 314 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 TMEM187Q14656 261 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 ATXN7L3Q14CW9 347 aaPredicted RBP2.74□□□□□ -1.97
CD44-229ENST00000528672 RAB35Q15286 201 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 ZNHIT3Q15649 155 aaPredicted RBP2.74□□□□□ -1.97
CD44-229ENST00000528672 CD226Q15762 336 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 ZBTB6Q15916 424 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 UPP1Q16831 310 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 TRIM16LQ309B1 348 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 GGTA1PQ4G0N0 100 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 CYBRD1Q53TN4 286 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 ZNF691Q5VV52 312 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 GPR107Q5VW38 600 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 RAET1LQ5VY80 246 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 WDR25Q64LD2 544 aaPredicted RBP2.74□□□□□ -1.97
CD44-229ENST00000528672 CYB5R2Q6BCY4 276 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 ANKRD26P1Q6NSI1 321 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 DOK6Q6PKX4 331 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 APOOLQ6UXV4 268 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 ASCL4Q6XD76 172 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 Q6ZRP5 223 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 Q6ZTC4 211 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 PEX26Q7Z412 305 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 MYPOPQ86VE0 399 aaPredicted RBP2.74□□□□□ -1.97
CD44-229ENST00000528672 KCNMB4Q86W47 210 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 SLC26A11Q86WA9 606 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 TMEM123Q8N131 208 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 STK40Q8N2I9 435 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 CLDN19Q8N6F1 224 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 PQLC3Q8N755 202 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 FBXL13Q8NEE6 735 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 FAM83FQ8NEG4 500 aaPredicted RBP2.74□□□□□ -1.97
CD44-229ENST00000528672 PROKR2Q8NFJ6 384 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 STXBP6Q8NFX7 210 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 OR5D13Q8NGL4 314 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 OR6X1Q8NH79 312 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 KCNG3Q8TAE7 436 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 RHEBL1Q8TAI7 183 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 ACTRT1Q8TDG2 376 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 NEK7Q8TDX7 302 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 TMEM190Q8WZ59 177 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 GTF2H4Q92759 462 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 BORCS5Q969J3 196 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 HAUS1Q96CS2 278 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 SGTBQ96EQ0 304 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 CERS2Q96G23 380 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 PDXPQ96GD0 296 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 COQ2Q96H96 371 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 AMDHD1Q96NU7 426 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 TSSK3Q96PN8 268 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 TEAD3Q99594 435 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 MAPKAP1Q9BPZ7 522 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 FAM173AQ9BQD7 235 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 TTYH2Q9BSA4 534 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 FEM1AQ9BSK4 669 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 MED10Q9BTT4 135 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 CHRDL1Q9BU40 450 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 ZNF717Q9BY31 904 aaPredicted RBP2.74□□□□□ -1.97
CD44-229ENST00000528672 TM6SF2Q9BZW4 377 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 STRADBQ9C0K7 418 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 RNF41Q9H4P4 317 aaPredicted RBP2.74□□□□□ -1.97
CD44-229ENST00000528672 CAB39LQ9H9S4 337 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 IL1RL2Q9HB29 575 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 SGK2Q9HBY8 427 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 LYRM4Q9HD34 91 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 RAB18Q9NP72 206 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 ABCB10Q9NRK6 738 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 DEPPQ9NTK1 212 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 COA4Q9NYJ1 87 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 THYN1Q9P016 225 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 PIPOXQ9P0Z9 390 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 SEC14L3Q9UDX4 400 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 RASD1Q9Y272 281 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 PYGO1Q9Y3Y4 419 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 MMACHCQ9Y4U1 282 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 WIF1Q9Y5W5 379 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 CPQQ9Y646 472 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 TNRQ92752 1358 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 PLEKHG1Q9ULL1 1385 aa2.74□□□□□ -1.97
CD44-229ENST00000528672 ARHGEF11O15085 1522 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 TRBV5-4A0A0C4DH59 114 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 A0A1W2PNV4 684 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 PQLC2LA1A4F0 135 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 ARHGEF33A8MVX0 844 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 C11orf98E9PRG8 122 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 G3V2L1 256 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 TEX46H3BTG2 121 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.73□□□□□ -1.97
CD44-229ENST00000528672 TRAFD1O14545 582 aaPredicted RBP2.73□□□□□ -1.97
CD44-229ENST00000528672 TFECO14948 347 aaPredicted RBP2.73□□□□□ -1.97
CD44-229ENST00000528672 ZNF749O43361 778 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 N4BP1O75113 896 aaKnown RBP2.73□□□□□ -1.97
CD44-229ENST00000528672 ADAP1O75689 374 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 LYPLA2O95372 231 aa2.73□□□□□ -1.97
CD44-229ENST00000528672 LDOC1O95751 146 aaPredicted RBP2.73□□□□□ -1.97
CD44-229ENST00000528672 NUDT14O95848 222 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms