RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 RGS9O75916 674 aaPredicted RBP13.81□□□□□ -0.2
PTPRU-210ENST00000527027 HPRP00739 348 aa13.81□□□□□ -0.2
PTPRU-210ENST00000527027 IDO1P14902 403 aa13.81□□□□□ -0.2
PTPRU-210ENST00000527027 ANPEPP15144 967 aa13.81□□□□□ -0.2
PTPRU-210ENST00000527027 NQO1P15559 274 aaKnown RBP13.81□□□□□ -0.2
PTPRU-210ENST00000527027 GIPRP48546 466 aa13.81□□□□□ -0.2
PTPRU-210ENST00000527027 PTDSS1P48651 473 aaKnown RBP13.81□□□□□ -0.2
PTPRU-210ENST00000527027 HILS1P60008 231 aa13.81□□□□□ -0.2
PTPRU-210ENST00000527027 GALK2Q01415 458 aa13.81□□□□□ -0.2
PTPRU-210ENST00000527027 MPP2Q14168 576 aa13.81□□□□□ -0.2
PTPRU-210ENST00000527027 MFSD13AQ14CX5 517 aa13.81□□□□□ -0.2
PTPRU-210ENST00000527027 KRT71Q3SY84 523 aa13.81□□□□□ -0.2
PTPRU-210ENST00000527027 GTDC1Q4AE62 458 aa13.81□□□□□ -0.2
PTPRU-210ENST00000527027 PDCD4Q53EL6 469 aaKnown RBP13.81□□□□□ -0.2
PTPRU-210ENST00000527027 CEP85LQ5SZL2 805 aa13.81□□□□□ -0.2
PTPRU-210ENST00000527027 THSD4Q6ZMP0 1018 aa13.81□□□□□ -0.2
PTPRU-210ENST00000527027 PEG10Q86TG7 708 aaKnown RBP13.81□□□□□ -0.2
PTPRU-210ENST00000527027 SNX32Q86XE0 403 aa13.81□□□□□ -0.2
PTPRU-210ENST00000527027 OR6S1Q8NH40 331 aa13.81□□□□□ -0.2
PTPRU-210ENST00000527027 MGARPQ8TDB4 240 aa13.81□□□□□ -0.2
PTPRU-210ENST00000527027 DNAJA4Q8WW22 397 aaPredicted RBP13.81□□□□□ -0.2
PTPRU-210ENST00000527027 VPS33AQ96AX1 596 aa13.81□□□□□ -0.2
PTPRU-210ENST00000527027 SLC41A3Q96GZ6 507 aa13.81□□□□□ -0.2
PTPRU-210ENST00000527027 ITCHQ96J02 903 aa13.81□□□□□ -0.2
PTPRU-210ENST00000527027 TXNDC15Q96J42 360 aa13.81□□□□□ -0.2
PTPRU-210ENST00000527027 ZNF416Q9BWM5 594 aa13.81□□□□□ -0.2
PTPRU-210ENST00000527027 ZNF385DQ9H6B1 395 aa13.81□□□□□ -0.2
PTPRU-210ENST00000527027 RMND5AQ9H871 391 aa13.81□□□□□ -0.2
PTPRU-210ENST00000527027 A4GALTQ9NPC4 353 aa13.81□□□□□ -0.2
PTPRU-210ENST00000527027 ZNF224Q9NZL3 707 aa13.81□□□□□ -0.2
PTPRU-210ENST00000527027 KLHL14Q9P2G3 628 aa13.81□□□□□ -0.2
PTPRU-210ENST00000527027 DUSP13Q9UII6 198 aa13.81□□□□□ -0.2
PTPRU-210ENST00000527027 FZR1Q9UM11 496 aa13.81□□□□□ -0.2
PTPRU-210ENST00000527027 A0A087WUJ7 227 aa13.8□□□□□ -0.2
PTPRU-210ENST00000527027 TRPC5OSA6NMA1 111 aa13.8□□□□□ -0.2
PTPRU-210ENST00000527027 ZNF726A6NNF4 738 aa13.8□□□□□ -0.2
PTPRU-210ENST00000527027 RAB36O95755 333 aa13.8□□□□□ -0.2
PTPRU-210ENST00000527027 PNPP00491 289 aa13.8□□□□□ -0.2
PTPRU-210ENST00000527027 NUDT7P0C024 238 aa13.8□□□□□ -0.2
PTPRU-210ENST00000527027 NAT2P11245 290 aa13.8□□□□□ -0.2
PTPRU-210ENST00000527027 HTR2AP28223 471 aa13.8□□□□□ -0.2
PTPRU-210ENST00000527027 ARFIP2P53365 341 aa13.8□□□□□ -0.2
PTPRU-210ENST00000527027 RGNQ15493 299 aa13.8□□□□□ -0.2
PTPRU-210ENST00000527027 ULK3Q6PHR2 472 aa13.8□□□□□ -0.2
PTPRU-210ENST00000527027 NHLRC1Q6VVB1 395 aa13.8□□□□□ -0.2
PTPRU-210ENST00000527027 C1orf229Q6ZS94 237 aaPredicted RBP13.8□□□□□ -0.2
PTPRU-210ENST00000527027 MSANTD1Q6ZTZ1 278 aa13.8□□□□□ -0.2
PTPRU-210ENST00000527027 OR6N1Q8NGY5 312 aa13.8□□□□□ -0.2
PTPRU-210ENST00000527027 BBS10Q8TAM1 723 aa13.8□□□□□ -0.2
PTPRU-210ENST00000527027 MAL2Q969L2 176 aa13.8□□□□□ -0.2
PTPRU-210ENST00000527027 JMJD8Q96S16 334 aa13.8□□□□□ -0.2
PTPRU-210ENST00000527027 FOXB1Q99853 325 aa13.8□□□□□ -0.2
PTPRU-210ENST00000527027 RBM4Q9BWF3 364 aaKnown RBP13.8□□□□□ -0.2
PTPRU-210ENST00000527027 ULBP2Q9BZM5 246 aa13.8□□□□□ -0.2
PTPRU-210ENST00000527027 FBXL3Q9UKT7 428 aa13.8□□□□□ -0.2
PTPRU-210ENST00000527027 ZNF346Q9UL40 294 aaKnown RBP13.8□□□□□ -0.2
PTPRU-210ENST00000527027 CORINQ9Y5Q5 1042 aa13.8□□□□□ -0.2
PTPRU-210ENST00000527027 RP2O75695 350 aa13.79□□□□□ -0.2
PTPRU-210ENST00000527027 NCR1O76036 304 aa13.79□□□□□ -0.2
PTPRU-210ENST00000527027 UBL3O95164 117 aa13.79□□□□□ -0.2
PTPRU-210ENST00000527027 ETS2P15036 469 aa13.79□□□□□ -0.2
PTPRU-210ENST00000527027 B4GALT1P15291 398 aa13.79□□□□□ -0.2
PTPRU-210ENST00000527027 EPHA1P21709 976 aa13.79□□□□□ -0.2
PTPRU-210ENST00000527027 PRKAR1BP31321 381 aa13.79□□□□□ -0.2
PTPRU-210ENST00000527027 LSP1P33241 339 aa13.79□□□□□ -0.2
PTPRU-210ENST00000527027 PMS2P3Q13401 168 aa13.79□□□□□ -0.2
PTPRU-210ENST00000527027 CAMK2DQ13557 499 aa13.79□□□□□ -0.2
PTPRU-210ENST00000527027 RAB39AQ14964 217 aa13.79□□□□□ -0.2
PTPRU-210ENST00000527027 GLIPR1L2Q4G1C9 344 aa13.79□□□□□ -0.2
PTPRU-210ENST00000527027 ALG10BQ5I7T1 473 aa13.79□□□□□ -0.2
PTPRU-210ENST00000527027 C6orf10Q5SRN2 563 aa13.79□□□□□ -0.2
PTPRU-210ENST00000527027 FAM91A1Q658Y4 838 aa13.79□□□□□ -0.2
PTPRU-210ENST00000527027 NXNQ6DKJ4 435 aa13.79□□□□□ -0.2
PTPRU-210ENST00000527027 ACSM5Q6NUN0 579 aa13.79□□□□□ -0.2
PTPRU-210ENST00000527027 SCAIQ8N9R8 606 aa13.79□□□□□ -0.2
PTPRU-210ENST00000527027 SLC47A1Q96FL8 570 aa13.79□□□□□ -0.2
PTPRU-210ENST00000527027 PAIP2Q9BPZ3 127 aaKnown RBP13.79□□□□□ -0.2
PTPRU-210ENST00000527027 ASPNQ9BXN1 380 aa13.79□□□□□ -0.2
PTPRU-210ENST00000527027 RSPO3Q9BXY4 272 aaPredicted RBP13.79□□□□□ -0.2
PTPRU-210ENST00000527027 RAD21L1Q9H4I0 556 aa13.79□□□□□ -0.2
PTPRU-210ENST00000527027 KCNK9Q9NPC2 374 aa13.79□□□□□ -0.2
PTPRU-210ENST00000527027 MED29Q9NX70 200 aa13.79□□□□□ -0.2
PTPRU-210ENST00000527027 ZIM2Q9NZV7 527 aa13.79□□□□□ -0.2
PTPRU-210ENST00000527027 SLC7A8Q9UHI5 535 aa13.79□□□□□ -0.2
PTPRU-210ENST00000527027 A0A1W2PPW3 197 aa13.78□□□□□ -0.2
PTPRU-210ENST00000527027 C5orf58C9J3I9 102 aa13.78□□□□□ -0.2
PTPRU-210ENST00000527027 CLIC1O00299 241 aa13.78□□□□□ -0.2
PTPRU-210ENST00000527027 AVPP01185 164 aa13.78□□□□□ -0.2
PTPRU-210ENST00000527027 SERPINA5P05154 406 aa13.78□□□□□ -0.2
PTPRU-210ENST00000527027 BMP2P12643 396 aa13.78□□□□□ -0.2
PTPRU-210ENST00000527027 LIMS1P48059 325 aa13.78□□□□□ -0.2
PTPRU-210ENST00000527027 PUDPQ08623 228 aa13.78□□□□□ -0.2
PTPRU-210ENST00000527027 FADDQ13158 208 aa13.78□□□□□ -0.2
PTPRU-210ENST00000527027 PIWIL3Q7Z3Z3 882 aaKnown RBP13.78□□□□□ -0.2
PTPRU-210ENST00000527027 PXKQ7Z7A4 578 aa13.78□□□□□ -0.2
PTPRU-210ENST00000527027 WDFY1Q8IWB7 410 aa13.78□□□□□ -0.2
PTPRU-210ENST00000527027 GTF2H4Q92759 462 aa13.78□□□□□ -0.2
PTPRU-210ENST00000527027 EPYCQ99645 322 aa13.78□□□□□ -0.2
PTPRU-210ENST00000527027 SLC52A3Q9NQ40 469 aa13.78□□□□□ -0.2
PTPRU-210ENST00000527027 G6PC2Q9NQR9 355 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms