RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 OR2AG2A6NM03 316 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 ZNF724A8MTY0 619 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 A8MUI8 341 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 A8MXK9 166 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 MYO1GB0I1T2 1018 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 SHISA9B4DS77 424 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 GOLGA8KD6RF30 607 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 KIF2AO00139 706 aaPredicted RBP1.23□□□□□ -2.21
CD44-212ENST00000524922 PSMD12O00232 456 aaPredicted RBP1.23□□□□□ -2.21
CD44-212ENST00000524922 CDC7O00311 574 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 FOXE1O00358 373 aaPredicted RBP1.23□□□□□ -2.21
CD44-212ENST00000524922 PRMT5O14744 637 aaPredicted RBP1.23□□□□□ -2.21
CD44-212ENST00000524922 ADAMDEC1O15204 470 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 PFDN6O15212 129 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 STX7O15400 261 aaKnown RBP1.23□□□□□ -2.21
CD44-212ENST00000524922 KIAA0513O60268 411 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 B4GALT2O60909 372 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 CTNSO60931 367 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 GCM2O75603 506 aaPredicted RBP1.23□□□□□ -2.21
CD44-212ENST00000524922 OR2J2O76002 312 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 KRT34O76011 436 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 OR6B1O95007 311 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 C1orf105O95561 183 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 OXSR1O95747 527 aaPredicted RBP1.23□□□□□ -2.21
CD44-212ENST00000524922 TGFAP01135 160 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 HLA-DQB2P05538 268 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 MSMBP08118 114 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 SERPINA6P08185 405 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 MELTFP08582 738 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 QDPRP09417 244 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 ALOX5P09917 674 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 SMIM10L1P0DMW3 83 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 GP9P14770 177 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 MMP9P14780 707 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 PFKFB1P16118 471 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 SELEP16581 610 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 ALOX12P18054 663 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 TPSB2P20231 275 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 SYT1P21579 422 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 ACHEP22303 614 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 FKBP2P26885 142 aaKnown RBP1.23□□□□□ -2.21
CD44-212ENST00000524922 MIPP30301 263 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 SLC6A1P30531 599 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 ADRA1AP35348 466 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 GP5P40197 560 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 PRKCIP41743 596 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 MAGEA1P43355 309 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 SYKP43405 635 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 TTPAP49638 278 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 LHX2P50458 406 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 CCR8P51685 355 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 AP1S2P56377 157 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 CLDN18P56856 261 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 RAB38P57729 211 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 STXBP1P61764 594 aaKnown RBP1.23□□□□□ -2.21
CD44-212ENST00000524922 SNRPD2P62316 118 aaKnown RBP1.23□□□□□ -2.21
CD44-212ENST00000524922 MAT1AQ00266 395 aaKnown RBP1.23□□□□□ -2.21
CD44-212ENST00000524922 SLC25A11Q02978 314 aaKnown RBP1.23□□□□□ -2.21
CD44-212ENST00000524922 ZNF415Q09FC8 603 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 EGFEM1PQ0D2K5 195 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 RASGEF1BQ0VAM2 473 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 TPSAB1Q15661 275 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 TAF9Q16594 264 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 HADHQ16836 314 aaKnown RBP1.23□□□□□ -2.21
CD44-212ENST00000524922 C15orf59Q2T9L4 293 aaPredicted RBP1.23□□□□□ -2.21
CD44-212ENST00000524922 HFEQ30201 348 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 DEFB110Q30KQ9 67 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 TTLL9Q3SXZ7 439 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 CCDC40Q4G0X9 1142 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 ANKRD20A4Q4UJ75 823 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 TOR1AIP1Q5JTV8 583 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 CDKL4Q5MAI5 379 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 ANKRD20A2Q5SQ80 823 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 CCDC122Q5T0U0 273 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 ANKRD20A1Q5TYW2 823 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 ANKRD20A3Q5VUR7 823 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 NCBP2-AS2Q69YL0 99 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 ZNF470Q6ECI4 717 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 ITPRIPL1Q6GPH6 555 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 FRMPD2BQ6IN97 320 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 UGT3A1Q6NUS8 523 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 LRRC8BQ6P9F7 803 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 DCUN1D2Q6PH85 259 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 AFTPHQ6ULP2 937 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 C3P1Q6ZMU1 363 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 LEKR1Q6ZMV7 388 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 C17orf107Q6ZR85 190 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 RFLNAQ6ZTI6 216 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 LANCL3Q6ZV70 420 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 RTN4RL2Q86UN3 420 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 KLHDC8AQ8IYD2 350 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 C1orf174Q8IYL3 243 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 CFAP206Q8IYR0 622 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 MCOLN2Q8IZK6 566 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 ST13P4Q8IZP2 240 aaPredicted RBP1.23□□□□□ -2.21
CD44-212ENST00000524922 SLC43A2Q8N370 569 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 Q8N7P7 452 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 ZDHHC22Q8N966 263 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 BANPQ8N9N5 519 aa1.23□□□□□ -2.21
CD44-212ENST00000524922 SPERTQ8NA61 448 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms