RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 AADACL4Q5VUY2 407 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 CREB3L2Q70SY1 520 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 PM20D2Q8IYS1 436 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 OR5M9Q8NGP3 310 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 ZPLD1Q8TCW7 415 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 OR51V1Q9H2C8 321 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 MGAQ8IWI9 3026 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 OR6C68A6NDL8 312 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 EIF4E1BA6NMX2 242 aaKnown RBP19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 PTGES3LE9PB15 166 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 CYTIPO60759 359 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 RENP00797 406 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 CCDC159P0C7I6 412 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 CRHBPP24387 322 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 CLDN17P56750 224 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 RUNX1T1Q06455 604 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 RASGEF1BQ0VAM2 473 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 DBPQ10586 325 aaPredicted RBP19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 KLHL12Q53G59 568 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 NXNL2Q5VZ03 156 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 FAM205BPQ63HN1 556 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 ZNF324BQ6AW86 544 aaPredicted RBP19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 ABLIM2Q6H8Q1 611 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 ADCK1Q86TW2 530 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 OR9Q1Q8NGQ5 310 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 FNDC9Q8TBE3 224 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 FAR1Q8WVX9 515 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 RFKQ969G6 155 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 BLOC1S6Q9UL45 172 aa19.05■□□□□ 0.64
R3HCC1-208ENST00000522012 ANKRD11Q6UB99 2663 aaPredicted RBP19.04■□□□□ 0.64
R3HCC1-208ENST00000522012 ZFYVE26Q68DK2 2539 aa19.04■□□□□ 0.64
R3HCC1-208ENST00000522012 MED12Q93074 2177 aa19.04■□□□□ 0.64
R3HCC1-208ENST00000522012 MAGEA13PA6NCF6 341 aa19.04■□□□□ 0.64
R3HCC1-208ENST00000522012 OR14I1A6ND48 311 aa19.04■□□□□ 0.64
R3HCC1-208ENST00000522012 SNTNA6NMZ2 147 aa19.04■□□□□ 0.64
R3HCC1-208ENST00000522012 ZNF726A6NNF4 738 aa19.04■□□□□ 0.64
R3HCC1-208ENST00000522012 CLCA1A8K7I4 914 aa19.04■□□□□ 0.64
R3HCC1-208ENST00000522012 M0R3G1 203 aa19.04■□□□□ 0.64
R3HCC1-208ENST00000522012 PRODHO43272 600 aa19.04■□□□□ 0.64
R3HCC1-208ENST00000522012 CLUP10909 449 aa19.04■□□□□ 0.64
R3HCC1-208ENST00000522012 EEF1B2P24534 225 aaKnown RBP19.04■□□□□ 0.64
R3HCC1-208ENST00000522012 LY6DQ14210 128 aa19.04■□□□□ 0.64
R3HCC1-208ENST00000522012 GID4Q8IVV7 300 aa19.04■□□□□ 0.64
R3HCC1-208ENST00000522012 WDFY1Q8IWB7 410 aa19.04■□□□□ 0.64
R3HCC1-208ENST00000522012 ABHD3Q8WU67 409 aa19.04■□□□□ 0.64
R3HCC1-208ENST00000522012 ZNF566Q969W8 418 aa19.04■□□□□ 0.64
R3HCC1-208ENST00000522012 ZNF775Q96BV0 537 aaPredicted RBP19.04■□□□□ 0.64
R3HCC1-208ENST00000522012 SNRNP40Q96DI7 357 aaKnown RBP19.04■□□□□ 0.64
R3HCC1-208ENST00000522012 DDOQ99489 341 aa19.04■□□□□ 0.64
R3HCC1-208ENST00000522012 RPRD1BQ9NQG5 326 aaKnown RBP19.04■□□□□ 0.64
R3HCC1-208ENST00000522012 PLCXD1Q9NUJ7 323 aa19.04■□□□□ 0.64
R3HCC1-208ENST00000522012 TPRKBQ9Y3C4 175 aa19.04■□□□□ 0.64
R3HCC1-208ENST00000522012 ATRXP46100 2492 aa19.04■□□□□ 0.64
R3HCC1-208ENST00000522012 PRSS37A4D1T9 235 aa19.03■□□□□ 0.64
R3HCC1-208ENST00000522012 SLC35F4A4IF30 521 aa19.03■□□□□ 0.64
R3HCC1-208ENST00000522012 ZNF716A6NP11 495 aa19.03■□□□□ 0.64
R3HCC1-208ENST00000522012 AQP8O94778 261 aa19.03■□□□□ 0.64
R3HCC1-208ENST00000522012 GYPBP06028 91 aa19.03■□□□□ 0.64
R3HCC1-208ENST00000522012 SLC16A1P53985 500 aa19.03■□□□□ 0.64
R3HCC1-208ENST00000522012 CDH11P55287 796 aa19.03■□□□□ 0.64
R3HCC1-208ENST00000522012 RPS7P62081 194 aaKnown RBP19.03■□□□□ 0.64
R3HCC1-208ENST00000522012 APOFQ13790 326 aa19.03■□□□□ 0.64
R3HCC1-208ENST00000522012 CARD17Q5XLA6 110 aa19.03■□□□□ 0.64
R3HCC1-208ENST00000522012 NIPAL3Q6P499 406 aa19.03■□□□□ 0.64
R3HCC1-208ENST00000522012 HDDC2Q7Z4H3 204 aa19.03■□□□□ 0.64
R3HCC1-208ENST00000522012 FGD2Q7Z6J4 655 aa19.03■□□□□ 0.64
R3HCC1-208ENST00000522012 SYT14Q8NB59 555 aa19.03■□□□□ 0.64
R3HCC1-208ENST00000522012 ZNF540Q8NDQ6 660 aa19.03■□□□□ 0.64
R3HCC1-208ENST00000522012 ZNF385AQ96PM9 386 aaKnown RBP19.03■□□□□ 0.64
R3HCC1-208ENST00000522012 ZNF696Q9H7X3 374 aa19.03■□□□□ 0.64
R3HCC1-208ENST00000522012 RPL36Q9Y3U8 105 aaKnown RBP19.03■□□□□ 0.64
R3HCC1-208ENST00000522012 MPDZO75970 2070 aa19.03■□□□□ 0.64
R3HCC1-208ENST00000522012 SLC22A20A6NK97 555 aa19.02■□□□□ 0.64
R3HCC1-208ENST00000522012 ERVH48-1M5A8F1 160 aa19.02■□□□□ 0.64
R3HCC1-208ENST00000522012 TRMUO75648 421 aaKnown RBP19.02■□□□□ 0.64
R3HCC1-208ENST00000522012 PTGS2P35354 604 aa19.02■□□□□ 0.64
R3HCC1-208ENST00000522012 KCTD21Q4G0X4 260 aa19.02■□□□□ 0.64
R3HCC1-208ENST00000522012 PRR30Q53SZ7 412 aaPredicted RBP19.02■□□□□ 0.64
R3HCC1-208ENST00000522012 MEPCEQ7L2J0 689 aaKnown RBP19.02■□□□□ 0.64
R3HCC1-208ENST00000522012 ZIC4Q8N9L1 334 aa19.02■□□□□ 0.64
R3HCC1-208ENST00000522012 OR6X1Q8NH79 312 aa19.02■□□□□ 0.64
R3HCC1-208ENST00000522012 RNF128Q8TEB7 428 aa19.02■□□□□ 0.64
R3HCC1-208ENST00000522012 ADAD1Q96M93 576 aaKnown RBP19.02■□□□□ 0.64
R3HCC1-208ENST00000522012 RHNO1Q9BSD3 238 aa19.02■□□□□ 0.64
R3HCC1-208ENST00000522012 SYT4Q9H2B2 425 aa19.02■□□□□ 0.64
R3HCC1-208ENST00000522012 RERGLQ9H628 205 aa19.02■□□□□ 0.64
R3HCC1-208ENST00000522012 SRA1Q9HD15 236 aaKnown RBP19.02■□□□□ 0.64
R3HCC1-208ENST00000522012 ASB6Q9NWX5 421 aa19.02■□□□□ 0.64
R3HCC1-208ENST00000522012 PSORS1C1Q9UIG5 152 aa19.02■□□□□ 0.64
R3HCC1-208ENST00000522012 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.02■□□□□ 0.64
R3HCC1-208ENST00000522012 SLC22A23A1A5C7 686 aa19.01■□□□□ 0.63
R3HCC1-208ENST00000522012 DBTP11182 482 aaKnown RBP19.01■□□□□ 0.63
R3HCC1-208ENST00000522012 HTR1FP30939 366 aa19.01■□□□□ 0.63
R3HCC1-208ENST00000522012 ZNF91Q05481 1191 aa19.01■□□□□ 0.63
R3HCC1-208ENST00000522012 CAMK2DQ13557 499 aa19.01■□□□□ 0.63
R3HCC1-208ENST00000522012 MCEMP1Q8IX19 187 aa19.01■□□□□ 0.63
R3HCC1-208ENST00000522012 GGHQ92820 318 aa19.01■□□□□ 0.63
R3HCC1-208ENST00000522012 SLC25A44Q96H78 314 aaPredicted RBP19.01■□□□□ 0.63
R3HCC1-208ENST00000522012 TSSK2Q96PF2 358 aa19.01■□□□□ 0.63
R3HCC1-208ENST00000522012 SNX18Q96RF0 628 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms