RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 MMP27Q9H306 513 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 RABEP2Q9H5N1 569 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 PRORYQ9H606 182 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 CLMPQ9H6B4 373 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 CXorf21Q9HAI6 301 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 HHATLQ9HCP6 504 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 MIEF1Q9NQG6 463 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 PNO1Q9NRX1 252 aaKnown RBP2.82□□□□□ -1.96
VPS13B-209ENST00000521559 MRGBPQ9NV56 204 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 COQ3Q9NZJ6 369 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 C5AR2Q9P296 337 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 FBXL4Q9UKA2 621 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 CLCA3PQ9Y6N3 262 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 ASXL3Q9C0F0 2248 aa2.82□□□□□ -1.96
VPS13B-209ENST00000521559 TDRD6O60522 2096 aaKnown RBP2.81□□□□□ -1.96
VPS13B-209ENST00000521559 TRBV11-1A0A0K0K1C0 115 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 PRSS51A0A1B0GVH4 220 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 A0A1W2PRB8 838 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 SAGE2PA6NJ88 616 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 ARGFXA6NJG6 315 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 OR6C76A6NM76 312 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 E9PBE3 544 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 CFLARO15519 480 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 SSX4O60224 188 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 CCDC22O60826 627 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 SHOX2O60902 331 aaPredicted RBP2.81□□□□□ -1.96
VPS13B-209ENST00000521559 SCN2BO60939 215 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 CEACAM4O75871 244 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 BCAS2O75934 225 aaPredicted RBP2.81□□□□□ -1.96
VPS13B-209ENST00000521559 ZFAND5O76080 213 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 FAM107AO95990 144 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 BCL10O95999 233 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 IGKV3-11P04433 115 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 IL6P05231 212 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 ZNF26P17031 533 aaPredicted RBP2.81□□□□□ -1.96
VPS13B-209ENST00000521559 NCF2P19878 526 aaPredicted RBP2.81□□□□□ -1.96
VPS13B-209ENST00000521559 DRD5P21918 477 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 IL12AP29459 219 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 NTSP30990 170 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 ZFP36L2P47974 494 aaKnown RBP2.81□□□□□ -1.96
VPS13B-209ENST00000521559 CCL11P51671 97 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 NCBP2P52298 156 aaKnown RBP eCLIP2.81□□□□□ -1.96
VPS13B-209ENST00000521559 POLR2JP52435 117 aaKnown RBP2.81□□□□□ -1.96
VPS13B-209ENST00000521559 NME5P56597 212 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 STX1BP61266 288 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 SPOCK1Q08629 439 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 LRRC74AQ0VAA2 488 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 MFAP5Q13361 173 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 LTB4RQ15722 352 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 FAM174BQ3ZCQ3 159 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 AGKQ53H12 422 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 PIGGQ5H8A4 983 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 C9orf152Q5JTZ5 239 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 SPANXN4Q5MJ08 99 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 FHL5Q5TD97 284 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 C6orf163Q5TEZ5 329 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 OR4F3Q6IEY1 312 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 ANKRD26P1Q6NSI1 321 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 H3F3CQ6NXT2 135 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 HSDL2Q6YN16 418 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 DGAT2L6Q6ZPD8 337 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 MSANTD1Q6ZTZ1 278 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 SPATA21Q7Z572 469 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 MTERF4Q7Z6M4 381 aaKnown RBP2.81□□□□□ -1.96
VPS13B-209ENST00000521559 FUNDC1Q8IVP5 155 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 LYG1Q8N1E2 194 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 LRRC25Q8N386 305 aaPredicted RBP2.81□□□□□ -1.96
VPS13B-209ENST00000521559 KIF2BQ8N4N8 673 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 ZNF321PQ8N8H1 164 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 ZNF615Q8N8J6 731 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 CLEC1AQ8NC01 280 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 B3GNT7Q8NFL0 401 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 OR8J2Q8NGG1 315 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 OR5L2Q8NGL0 311 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 OR9A2Q8NGT5 310 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 OR8K3Q8NH51 312 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 PSMA8Q8TAA3 256 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 NUBPLQ8TB37 319 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 DOK4Q8TEW6 326 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 ZNF721Q8TF20 911 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 PSMF1Q92530 271 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 NCLNQ969V3 563 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 CIDECQ96AQ7 238 aaPredicted RBP2.81□□□□□ -1.96
VPS13B-209ENST00000521559 ZBED6CLQ96FA7 236 aaPredicted RBP2.81□□□□□ -1.96
VPS13B-209ENST00000521559 VMP1Q96GC9 406 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 ITCHQ96J02 903 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 TEX37Q96LM6 180 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 OR52E6Q96RD3 313 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 CCT8L2Q96SF2 557 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 PSD2Q9BQI7 771 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 RHNO1Q9BSD3 238 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 NUDT9Q9BW91 350 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 DEFB126Q9BYW3 111 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 OR8D2Q9GZM6 311 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 FAM107BQ9H098 131 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 OR10A4Q9H209 315 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 KCNK15Q9H427 330 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 GLIPR2Q9H4G4 154 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 ZNF385DQ9H6B1 395 aa2.81□□□□□ -1.96
VPS13B-209ENST00000521559 RMND5AQ9H871 391 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms