RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 OR10A6Q8NH74 314 aa13.72□□□□□ -0.21
CLN8-205ENST00000520991 ADAMTS16Q8TE57 1224 aa13.72□□□□□ -0.21
CLN8-205ENST00000520991 TXNDC15Q96J42 360 aa13.72□□□□□ -0.21
CLN8-205ENST00000520991 KCNK17Q96T54 332 aa13.72□□□□□ -0.21
CLN8-205ENST00000520991 RAB1BQ9H0U4 201 aa13.72□□□□□ -0.21
CLN8-205ENST00000520991 PLK3Q9H4B4 646 aa13.72□□□□□ -0.21
CLN8-205ENST00000520991 MYOZ1Q9NP98 299 aaPredicted RBP13.72□□□□□ -0.21
CLN8-205ENST00000520991 ARFGEF3Q5TH69 2177 aa13.71□□□□□ -0.21
CLN8-205ENST00000520991 TRAPPC13A5PLN9 417 aa13.71□□□□□ -0.21
CLN8-205ENST00000520991 hCG_2039718K7EN88 272 aa13.71□□□□□ -0.21
CLN8-205ENST00000520991 HLA-HP01893 362 aa13.71□□□□□ -0.21
CLN8-205ENST00000520991 ERCC1P07992 297 aaPredicted RBP13.71□□□□□ -0.21
CLN8-205ENST00000520991 VIMP08670 466 aaKnown RBP13.71□□□□□ -0.21
CLN8-205ENST00000520991 ZNF16P17020 682 aaPredicted RBP13.71□□□□□ -0.21
CLN8-205ENST00000520991 NPR2P20594 1047 aa13.71□□□□□ -0.21
CLN8-205ENST00000520991 CD247P20963 164 aa13.71□□□□□ -0.21
CLN8-205ENST00000520991 THBS4P35443 961 aa13.71□□□□□ -0.21
CLN8-205ENST00000520991 CSNK1A1P48729 337 aa13.71□□□□□ -0.21
CLN8-205ENST00000520991 BIDP55957 195 aa13.71□□□□□ -0.21
CLN8-205ENST00000520991 LSM11P83369 360 aaKnown RBP eCLIP13.71□□□□□ -0.21
CLN8-205ENST00000520991 SNTB2Q13425 540 aaKnown RBP13.71□□□□□ -0.21
CLN8-205ENST00000520991 CYLC2Q14093 348 aaPredicted RBP13.71□□□□□ -0.21
CLN8-205ENST00000520991 DAG1Q14118 895 aa13.71□□□□□ -0.21
CLN8-205ENST00000520991 GSG1Q2KHT4 349 aa13.71□□□□□ -0.21
CLN8-205ENST00000520991 TRMT5Q32P41 509 aaKnown RBP13.71□□□□□ -0.21
CLN8-205ENST00000520991 PODNL1Q6PEZ8 512 aa13.71□□□□□ -0.21
CLN8-205ENST00000520991 LINC00114Q6XXX2 140 aa13.71□□□□□ -0.21
CLN8-205ENST00000520991 SPATA21Q7Z572 469 aa13.71□□□□□ -0.21
CLN8-205ENST00000520991 RBM45Q8IUH3 476 aaKnown RBP13.71□□□□□ -0.21
CLN8-205ENST00000520991 RASSF5Q8WWW0 418 aa13.71□□□□□ -0.21
CLN8-205ENST00000520991 TAMM41Q96BW9 452 aa13.71□□□□□ -0.21
CLN8-205ENST00000520991 NANSQ9NR45 359 aa13.71□□□□□ -0.21
CLN8-205ENST00000520991 SLC7A7Q9UM01 511 aa13.71□□□□□ -0.21
CLN8-205ENST00000520991 FBN1P35555 2871 aaKnown RBP13.71□□□□□ -0.22
CLN8-205ENST00000520991 LOC390937A0A1W2PQ73 354 aa13.7□□□□□ -0.22
CLN8-205ENST00000520991 KPNA4O00629 521 aaPredicted RBP13.7□□□□□ -0.22
CLN8-205ENST00000520991 CH25HO95992 272 aa13.7□□□□□ -0.22
CLN8-205ENST00000520991 HIST1H2ABP04908 130 aa13.7□□□□□ -0.22
CLN8-205ENST00000520991 IGHV4-31P0DP07 118 aa13.7□□□□□ -0.22
CLN8-205ENST00000520991 IFNGR1P15260 489 aa13.7□□□□□ -0.22
CLN8-205ENST00000520991 B4GALT1P15291 398 aa13.7□□□□□ -0.22
CLN8-205ENST00000520991 H2AFXP16104 143 aaPredicted RBP13.7□□□□□ -0.22
CLN8-205ENST00000520991 NR4A2P43354 598 aa13.7□□□□□ -0.22
CLN8-205ENST00000520991 PIGFQ07326 219 aa13.7□□□□□ -0.22
CLN8-205ENST00000520991 ZNF74Q16587 644 aa13.7□□□□□ -0.22
CLN8-205ENST00000520991 VMACQ2NL98 169 aa13.7□□□□□ -0.22
CLN8-205ENST00000520991 IQCCQ4KMZ1 466 aa13.7□□□□□ -0.22
CLN8-205ENST00000520991 KRT80Q6KB66 452 aa13.7□□□□□ -0.22
CLN8-205ENST00000520991 NHLRC1Q6VVB1 395 aa13.7□□□□□ -0.22
CLN8-205ENST00000520991 WDR88Q6ZMY6 472 aa13.7□□□□□ -0.22
CLN8-205ENST00000520991 HIST3H2AQ7L7L0 130 aa13.7□□□□□ -0.22
CLN8-205ENST00000520991 CXXC5Q7LFL8 322 aaKnown RBP13.7□□□□□ -0.22
CLN8-205ENST00000520991 WDFY1Q8IWB7 410 aa13.7□□□□□ -0.22
CLN8-205ENST00000520991 SVOPLQ8N434 492 aa13.7□□□□□ -0.22
CLN8-205ENST00000520991 OR4D11Q8NGI4 311 aa13.7□□□□□ -0.22
CLN8-205ENST00000520991 HIST1H2ACQ93077 130 aa13.7□□□□□ -0.22
CLN8-205ENST00000520991 MPP4Q96JB8 637 aa13.7□□□□□ -0.22
CLN8-205ENST00000520991 FOXB1Q99853 325 aa13.7□□□□□ -0.22
CLN8-205ENST00000520991 SH3GL1Q99961 368 aa13.7□□□□□ -0.22
CLN8-205ENST00000520991 TMEM120AQ9BXJ8 343 aa13.7□□□□□ -0.22
CLN8-205ENST00000520991 NOX3Q9HBY0 568 aa13.7□□□□□ -0.22
CLN8-205ENST00000520991 DYNLRB1Q9NP97 96 aa13.7□□□□□ -0.22
CLN8-205ENST00000520991 B3GNT2Q9NY97 397 aa13.7□□□□□ -0.22
CLN8-205ENST00000520991 CDC42EP3Q9UKI2 254 aa13.7□□□□□ -0.22
CLN8-205ENST00000520991 CUBNO60494 3623 aa13.69□□□□□ -0.22
CLN8-205ENST00000520991 SH3PXD2BA1X283 911 aa13.69□□□□□ -0.22
CLN8-205ENST00000520991 VWC2LB2RUY7 222 aa13.69□□□□□ -0.22
CLN8-205ENST00000520991 FBP2O00757 339 aa13.69□□□□□ -0.22
CLN8-205ENST00000520991 RNF13O43567 381 aa13.69□□□□□ -0.22
CLN8-205ENST00000520991 RAB36O95755 333 aa13.69□□□□□ -0.22
CLN8-205ENST00000520991 THY1P04216 161 aa13.69□□□□□ -0.22
CLN8-205ENST00000520991 TROVE2P10155 538 aaKnown RBP eCLIP13.69□□□□□ -0.22
CLN8-205ENST00000520991 UMPSP11172 480 aa13.69□□□□□ -0.22
CLN8-205ENST00000520991 PTDSS1P48651 473 aaKnown RBP13.69□□□□□ -0.22
CLN8-205ENST00000520991 GZMKP49863 264 aa13.69□□□□□ -0.22
CLN8-205ENST00000520991 MMEL1Q495T6 779 aa13.69□□□□□ -0.22
CLN8-205ENST00000520991 NANOGP8Q6NSW7 305 aa13.69□□□□□ -0.22
CLN8-205ENST00000520991 SLC35D2Q76EJ3 337 aa13.69□□□□□ -0.22
CLN8-205ENST00000520991 ZNF627Q7L945 461 aa13.69□□□□□ -0.22
CLN8-205ENST00000520991 ZNF540Q8NDQ6 660 aa13.69□□□□□ -0.22
CLN8-205ENST00000520991 MS4A3Q96HJ5 214 aa13.69□□□□□ -0.22
CLN8-205ENST00000520991 FOXN4Q96NZ1 517 aa13.69□□□□□ -0.22
CLN8-205ENST00000520991 ECSITQ9BQ95 431 aa13.69□□□□□ -0.22
CLN8-205ENST00000520991 PCDHAC1Q9H158 963 aa13.69□□□□□ -0.22
CLN8-205ENST00000520991 NANOGQ9H9S0 305 aa13.69□□□□□ -0.22
CLN8-205ENST00000520991 MRGBPQ9NV56 204 aa13.69□□□□□ -0.22
CLN8-205ENST00000520991 CMAHPQ9Y471 501 aa13.69□□□□□ -0.22
CLN8-205ENST00000520991 SPEF1Q9Y4P9 236 aa13.69□□□□□ -0.22
CLN8-205ENST00000520991 ATRQ13535 2644 aa13.69□□□□□ -0.22
CLN8-205ENST00000520991 UBL3O95164 117 aa13.68□□□□□ -0.22
CLN8-205ENST00000520991 LYPD3O95274 346 aa13.68□□□□□ -0.22
CLN8-205ENST00000520991 APEHP13798 732 aaKnown RBP13.68□□□□□ -0.22
CLN8-205ENST00000520991 RABL3Q5HYI8 236 aa13.68□□□□□ -0.22
CLN8-205ENST00000520991 NANOGNBQ7Z5D8 188 aa13.68□□□□□ -0.22
CLN8-205ENST00000520991 OR6X1Q8NH79 312 aa13.68□□□□□ -0.22
CLN8-205ENST00000520991 NEU4Q8WWR8 484 aaPredicted RBP13.68□□□□□ -0.22
CLN8-205ENST00000520991 ZNF566Q969W8 418 aa13.68□□□□□ -0.22
CLN8-205ENST00000520991 DOK1Q99704 481 aa13.68□□□□□ -0.22
CLN8-205ENST00000520991 BEX2Q9BXY8 128 aa13.68□□□□□ -0.22
CLN8-205ENST00000520991 SLC19A3Q9BZV2 496 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms