RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 ZNF813Q6ZN06 617 aa17.8■□□□□ 0.44
SNHG6-203ENST00000520944 HIST3H2AQ7L7L0 130 aa17.8■□□□□ 0.44
SNHG6-203ENST00000520944 HIPK1Q86Z02 1210 aa17.8■□□□□ 0.44
SNHG6-203ENST00000520944 RBM45Q8IUH3 476 aaKnown RBP17.8■□□□□ 0.44
SNHG6-203ENST00000520944 HIST1H2ACQ93077 130 aa17.8■□□□□ 0.44
SNHG6-203ENST00000520944 TAMM41Q96BW9 452 aa17.8■□□□□ 0.44
SNHG6-203ENST00000520944 MPP4Q96JB8 637 aa17.8■□□□□ 0.44
SNHG6-203ENST00000520944 SORCS2Q96PQ0 1159 aa17.8■□□□□ 0.44
SNHG6-203ENST00000520944 ECSITQ9BQ95 431 aa17.8■□□□□ 0.44
SNHG6-203ENST00000520944 PIMREGQ9BSJ6 248 aa17.8■□□□□ 0.44
SNHG6-203ENST00000520944 RAB1BQ9H0U4 201 aa17.8■□□□□ 0.44
SNHG6-203ENST00000520944 PLK3Q9H4B4 646 aa17.8■□□□□ 0.44
SNHG6-203ENST00000520944 ZNF442Q9H7R0 627 aa17.8■□□□□ 0.44
SNHG6-203ENST00000520944 NANOGQ9H9S0 305 aa17.8■□□□□ 0.44
SNHG6-203ENST00000520944 NANSQ9NR45 359 aa17.8■□□□□ 0.44
SNHG6-203ENST00000520944 SLC7A7Q9UM01 511 aa17.8■□□□□ 0.44
SNHG6-203ENST00000520944 IGHV2OR16-5A0A0B4J2B6 119 aa17.79■□□□□ 0.44
SNHG6-203ENST00000520944 NDUFS8O00217 210 aa17.79■□□□□ 0.44
SNHG6-203ENST00000520944 IFNA2P01563 188 aa17.79■□□□□ 0.44
SNHG6-203ENST00000520944 HLA-HP01893 362 aa17.79■□□□□ 0.44
SNHG6-203ENST00000520944 ERCC1P07992 297 aaPredicted RBP17.79■□□□□ 0.44
SNHG6-203ENST00000520944 IFNGR1P15260 489 aa17.79■□□□□ 0.44
SNHG6-203ENST00000520944 NPR2P20594 1047 aa17.79■□□□□ 0.44
SNHG6-203ENST00000520944 THBS4P35443 961 aa17.79■□□□□ 0.44
SNHG6-203ENST00000520944 CSNK1A1P48729 337 aa17.79■□□□□ 0.44
SNHG6-203ENST00000520944 BIDP55957 195 aa17.79■□□□□ 0.44
SNHG6-203ENST00000520944 VLDLRP98155 873 aa17.79■□□□□ 0.44
SNHG6-203ENST00000520944 GSG1Q2KHT4 349 aa17.79■□□□□ 0.44
SNHG6-203ENST00000520944 C6orf52Q5T4I8 152 aa17.79■□□□□ 0.44
SNHG6-203ENST00000520944 NHLRC1Q6VVB1 395 aa17.79■□□□□ 0.44
SNHG6-203ENST00000520944 MYOZ1Q9NP98 299 aaPredicted RBP17.79■□□□□ 0.44
SNHG6-203ENST00000520944 ZNF503-AS2A6NEH8 195 aa17.78■□□□□ 0.44
SNHG6-203ENST00000520944 FBP2O00757 339 aa17.78■□□□□ 0.44
SNHG6-203ENST00000520944 RNF13O43567 381 aa17.78■□□□□ 0.44
SNHG6-203ENST00000520944 NPPAP01160 153 aa17.78■□□□□ 0.44
SNHG6-203ENST00000520944 UMPSP11172 480 aa17.78■□□□□ 0.44
SNHG6-203ENST00000520944 PPOXP50336 477 aa17.78■□□□□ 0.44
SNHG6-203ENST00000520944 ARFIP2P53365 341 aa17.78■□□□□ 0.44
SNHG6-203ENST00000520944 LSM11P83369 360 aaKnown RBP eCLIP17.78■□□□□ 0.44
SNHG6-203ENST00000520944 PIGFQ07326 219 aa17.78■□□□□ 0.44
SNHG6-203ENST00000520944 DAG1Q14118 895 aa17.78■□□□□ 0.44
SNHG6-203ENST00000520944 ZNF74Q16587 644 aa17.78■□□□□ 0.44
SNHG6-203ENST00000520944 CHRFAM7AQ494W8 412 aa17.78■□□□□ 0.44
SNHG6-203ENST00000520944 CYB5R2Q6BCY4 276 aa17.78■□□□□ 0.44
SNHG6-203ENST00000520944 WDR88Q6ZMY6 472 aa17.78■□□□□ 0.44
SNHG6-203ENST00000520944 CCDC80Q76M96 950 aa17.78■□□□□ 0.44
SNHG6-203ENST00000520944 SPATA21Q7Z572 469 aa17.78■□□□□ 0.44
SNHG6-203ENST00000520944 MYPOPQ86VE0 399 aaPredicted RBP17.78■□□□□ 0.44
SNHG6-203ENST00000520944 ANKS4BQ8N8V4 417 aa17.78■□□□□ 0.44
SNHG6-203ENST00000520944 OR4D11Q8NGI4 311 aa17.78■□□□□ 0.44
SNHG6-203ENST00000520944 LRRC58Q96CX6 371 aa17.78■□□□□ 0.44
SNHG6-203ENST00000520944 KCNK17Q96T54 332 aa17.78■□□□□ 0.44
SNHG6-203ENST00000520944 MDFIQ99750 246 aa17.78■□□□□ 0.44
SNHG6-203ENST00000520944 SLC19A3Q9BZV2 496 aa17.78■□□□□ 0.44
SNHG6-203ENST00000520944 B3GNT2Q9NY97 397 aa17.78■□□□□ 0.44
SNHG6-203ENST00000520944 SPEF1Q9Y4P9 236 aa17.78■□□□□ 0.44
SNHG6-203ENST00000520944 LOC390937A0A1W2PQ73 354 aa17.77■□□□□ 0.44
SNHG6-203ENST00000520944 hCG_2039718K7EN88 272 aa17.77■□□□□ 0.44
SNHG6-203ENST00000520944 KPNA4O00629 521 aaPredicted RBP17.77■□□□□ 0.44
SNHG6-203ENST00000520944 SASH3O75995 380 aa17.77■□□□□ 0.44
SNHG6-203ENST00000520944 THY1P04216 161 aa17.77■□□□□ 0.44
SNHG6-203ENST00000520944 B4GALT1P15291 398 aa17.77■□□□□ 0.44
SNHG6-203ENST00000520944 GZMMP51124 257 aa17.77■□□□□ 0.44
SNHG6-203ENST00000520944 ZP4Q12836 540 aa17.77■□□□□ 0.44
SNHG6-203ENST00000520944 SLC35D2Q76EJ3 337 aa17.77■□□□□ 0.44
SNHG6-203ENST00000520944 ZNF627Q7L945 461 aa17.77■□□□□ 0.44
SNHG6-203ENST00000520944 ZNF540Q8NDQ6 660 aa17.77■□□□□ 0.44
SNHG6-203ENST00000520944 OR8J3Q8NGG0 315 aa17.77■□□□□ 0.44
SNHG6-203ENST00000520944 OR6X1Q8NH79 312 aa17.77■□□□□ 0.44
SNHG6-203ENST00000520944 FOXB1Q99853 325 aa17.77■□□□□ 0.44
SNHG6-203ENST00000520944 PCDHAC1Q9H158 963 aa17.77■□□□□ 0.44
SNHG6-203ENST00000520944 DENND2DQ9H6A0 471 aaPredicted RBP17.77■□□□□ 0.44
SNHG6-203ENST00000520944 TAS2R5Q9NYW4 299 aa17.77■□□□□ 0.44
SNHG6-203ENST00000520944 ZNF229Q9UJW7 825 aa17.77■□□□□ 0.44
SNHG6-203ENST00000520944 BAG5Q9UL15 447 aa17.77■□□□□ 0.44
SNHG6-203ENST00000520944 SH3GLB1Q9Y371 365 aa17.77■□□□□ 0.44
SNHG6-203ENST00000520944 CR1P17927 2039 aa17.77■□□□□ 0.43
SNHG6-203ENST00000520944 FBN1P35555 2871 aaKnown RBP17.77■□□□□ 0.43
SNHG6-203ENST00000520944 ATRQ13535 2644 aa17.76■□□□□ 0.43
SNHG6-203ENST00000520944 ENTPD5O75356 428 aa17.76■□□□□ 0.43
SNHG6-203ENST00000520944 LYPD3O95274 346 aa17.76■□□□□ 0.43
SNHG6-203ENST00000520944 RAB36O95755 333 aa17.76■□□□□ 0.43
SNHG6-203ENST00000520944 IFNA14P01570 189 aa17.76■□□□□ 0.43
SNHG6-203ENST00000520944 NR4A2P43354 598 aa17.76■□□□□ 0.43
SNHG6-203ENST00000520944 PTDSS1P48651 473 aaKnown RBP17.76■□□□□ 0.43
SNHG6-203ENST00000520944 RAB1AP62820 205 aa17.76■□□□□ 0.43
SNHG6-203ENST00000520944 SNTB2Q13425 540 aaKnown RBP17.76■□□□□ 0.43
SNHG6-203ENST00000520944 GGTLC2Q14390 218 aa17.76■□□□□ 0.43
SNHG6-203ENST00000520944 MAPRE2Q15555 327 aa17.76■□□□□ 0.43
SNHG6-203ENST00000520944 RABL3Q5HYI8 236 aa17.76■□□□□ 0.43
SNHG6-203ENST00000520944 COQ5Q5HYK3 327 aa17.76■□□□□ 0.43
SNHG6-203ENST00000520944 KRT80Q6KB66 452 aa17.76■□□□□ 0.43
SNHG6-203ENST00000520944 PODNL1Q6PEZ8 512 aa17.76■□□□□ 0.43
SNHG6-203ENST00000520944 SVOPLQ8N434 492 aa17.76■□□□□ 0.43
SNHG6-203ENST00000520944 ZNF566Q969W8 418 aa17.76■□□□□ 0.43
SNHG6-203ENST00000520944 FOXN4Q96NZ1 517 aa17.76■□□□□ 0.43
SNHG6-203ENST00000520944 NOX3Q9HBY0 568 aa17.76■□□□□ 0.43
SNHG6-203ENST00000520944 GLTPQ9NZD2 209 aa17.76■□□□□ 0.43
SNHG6-203ENST00000520944 CDC42EP3Q9UKI2 254 aa17.76■□□□□ 0.43
SNHG6-203ENST00000520944 CMAHPQ9Y471 501 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms