RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 RAB40AQ8WXH6 277 aa16.68■□□□□ 0.26
SDC2-202ENST00000518385 NSMAFQ92636 917 aa16.68■□□□□ 0.26
SDC2-202ENST00000518385 CCNL2Q96S94 520 aaPredicted RBP16.68■□□□□ 0.26
SDC2-202ENST00000518385 LRFN3Q9BTN0 628 aa16.68■□□□□ 0.26
SDC2-202ENST00000518385 NRIP3Q9NQ35 241 aa16.68■□□□□ 0.26
SDC2-202ENST00000518385 NPDC1Q9NQX5 325 aaPredicted RBP16.68■□□□□ 0.26
SDC2-202ENST00000518385 FGF21Q9NSA1 209 aa16.68■□□□□ 0.26
SDC2-202ENST00000518385 DNAJB12Q9NXW2 375 aaKnown RBP16.68■□□□□ 0.26
SDC2-202ENST00000518385 WDFY4Q6ZS81 3184 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 IGHV5-10-1A0A0J9YXX1 117 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 A0A1B0GW55 424 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 A0A1W2PPL8 197 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 KRBOX1C9JBD0 128 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 HRKO00198 91 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 NTN3O00634 580 aaPredicted RBP16.67■□□□□ 0.26
SDC2-202ENST00000518385 CDC42EP2O14613 210 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 PIP5K1CO60331 668 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 SERPINI2O75830 405 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 RGS11O94810 467 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 IGKV1D-16P01601 117 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 CLPSP04118 112 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 DUX4L2P0CJ85 424 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 DUX4L3P0CJ86 424 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 DUX4L4P0CJ87 422 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 DUX4L5P0CJ88 424 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 DUX4L6P0CJ89 424 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 DUX4L7P0CJ90 424 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 CD59P13987 128 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 IFNGR1P15260 489 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 CTRB1P17538 263 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 ACP1P24666 158 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 CALCRP30988 508 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 OR1D4P47884 311 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 ZNF85Q03923 595 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 INSL4Q14641 139 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 CDK5R1Q15078 307 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 CTRB2Q6GPI1 263 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 ZAR1Q86SH2 424 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 IQCF2Q8IXL9 164 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 BCORP1Q8N888 145 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 OR14A16Q8NHC5 309 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 SMPDL3BQ92485 455 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 CNOT9Q92600 299 aaKnown RBP16.67■□□□□ 0.26
SDC2-202ENST00000518385 C4orf36Q96KX1 117 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 RBP7Q96R05 134 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 KLHL9Q9P2J3 617 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 DUX4Q9UBX2 424 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 NTNG1Q9Y2I2 539 aa16.67■□□□□ 0.26
SDC2-202ENST00000518385 PCDHGA9Q9Y5G4 932 aaKnown RBP16.67■□□□□ 0.26
SDC2-202ENST00000518385 CACNA1HO95180 2353 aa16.66■□□□□ 0.26
SDC2-202ENST00000518385 VPS13AQ96RL7 3174 aa16.66■□□□□ 0.26
SDC2-202ENST00000518385 NPIPA5A0A0B4J1W7 369 aa16.66■□□□□ 0.26
SDC2-202ENST00000518385 A0A0B4J2E0 115 aa16.66■□□□□ 0.26
SDC2-202ENST00000518385 A0A1B0GX12 115 aa16.66■□□□□ 0.26
SDC2-202ENST00000518385 hCG_1807616A0A1W2PRN6 198 aa16.66■□□□□ 0.26
SDC2-202ENST00000518385 TCRBV16S1A1N1A0A5B0 115 aa16.66■□□□□ 0.26
SDC2-202ENST00000518385 NPIPA7E9PJI5 369 aa16.66■□□□□ 0.26
SDC2-202ENST00000518385 GP1BAP07359 652 aa16.66■□□□□ 0.26
SDC2-202ENST00000518385 GKN3PP0CG01 181 aa16.66■□□□□ 0.26
SDC2-202ENST00000518385 NPIPA8P0DM63 369 aa16.66■□□□□ 0.26
SDC2-202ENST00000518385 CXCL3P19876 107 aa16.66■□□□□ 0.26
SDC2-202ENST00000518385 MAPK3P27361 379 aaPredicted RBP16.66■□□□□ 0.26
SDC2-202ENST00000518385 ACAA2P42765 397 aaKnown RBP16.66■□□□□ 0.26
SDC2-202ENST00000518385 SLC37A1P57057 533 aa16.66■□□□□ 0.26
SDC2-202ENST00000518385 DGCR2P98153 550 aa16.66■□□□□ 0.26
SDC2-202ENST00000518385 SLC3A1Q07837 685 aa16.66■□□□□ 0.26
SDC2-202ENST00000518385 SLC35D3Q5M8T2 416 aa16.66■□□□□ 0.26
SDC2-202ENST00000518385 FAM122CQ6P4D5 195 aa16.66■□□□□ 0.26
SDC2-202ENST00000518385 FAM198BQ6UWH4 519 aa16.66■□□□□ 0.26
SDC2-202ENST00000518385 NAXDQ8IW45 347 aa16.66■□□□□ 0.26
SDC2-202ENST00000518385 PLPP5Q8NEB5 264 aa16.66■□□□□ 0.26
SDC2-202ENST00000518385 OR4N2Q8NGD1 307 aa16.66■□□□□ 0.26
SDC2-202ENST00000518385 OR2T35Q8NGX2 323 aa16.66■□□□□ 0.26
SDC2-202ENST00000518385 GHSRQ92847 366 aa16.66■□□□□ 0.26
SDC2-202ENST00000518385 DAZLQ92904 295 aaKnown RBP16.66■□□□□ 0.26
SDC2-202ENST00000518385 TGIF2Q9GZN2 237 aa16.66■□□□□ 0.26
SDC2-202ENST00000518385 KLHL1Q9NR64 748 aa16.66■□□□□ 0.26
SDC2-202ENST00000518385 ZMIZ1Q9ULJ6 1067 aa16.66■□□□□ 0.26
SDC2-202ENST00000518385 SIGLEC7Q9Y286 467 aa16.66■□□□□ 0.26
SDC2-202ENST00000518385 ETV7Q9Y603 341 aa16.66■□□□□ 0.26
SDC2-202ENST00000518385 COL5A1P20908 1838 aaPredicted RBP16.66■□□□□ 0.26
SDC2-202ENST00000518385 SERINC4A6NH21 518 aa16.65■□□□□ 0.26
SDC2-202ENST00000518385 J3QLW9 94 aa16.65■□□□□ 0.26
SDC2-202ENST00000518385 PTP4A3O75365 173 aa16.65■□□□□ 0.26
SDC2-202ENST00000518385 KRT33AO76009 404 aa16.65■□□□□ 0.26
SDC2-202ENST00000518385 WDPCPO95876 746 aa16.65■□□□□ 0.26
SDC2-202ENST00000518385 IGKV3-11P04433 115 aa16.65■□□□□ 0.26
SDC2-202ENST00000518385 CD3GP09693 182 aa16.65■□□□□ 0.26
SDC2-202ENST00000518385 CALCBP10092 127 aa16.65■□□□□ 0.26
SDC2-202ENST00000518385 ZNF19P17023 458 aa16.65■□□□□ 0.26
SDC2-202ENST00000518385 GDNFP39905 211 aa16.65■□□□□ 0.26
SDC2-202ENST00000518385 BLVRAP53004 296 aa16.65■□□□□ 0.26
SDC2-202ENST00000518385 OR10A3P58181 314 aa16.65■□□□□ 0.26
SDC2-202ENST00000518385 SPEM2Q0P670 501 aa16.65■□□□□ 0.26
SDC2-202ENST00000518385 OPCMLQ14982 345 aa16.65■□□□□ 0.26
SDC2-202ENST00000518385 ISXQ2M1V0 245 aa16.65■□□□□ 0.26
SDC2-202ENST00000518385 ARHGAP40Q5TG30 622 aa16.65■□□□□ 0.26
SDC2-202ENST00000518385 RHBDD2Q6NTF9 364 aa16.65■□□□□ 0.26
SDC2-202ENST00000518385 ULK3Q6PHR2 472 aa16.65■□□□□ 0.26
SDC2-202ENST00000518385 TMEM65Q6PI78 240 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms