RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 HIST3H2BBQ8N257 126 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF664Q8N3J9 261 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 SLC38A9Q8NBW4 561 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 CLEC18CQ8NCF0 446 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 C17orf47Q8NEP4 570 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 CHST13Q8NET6 341 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 Q8NFD4 153 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR4E2Q8NGC2 313 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR8J1Q8NGP2 316 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR1S2Q8NGQ3 325 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR9I1Q8NGQ6 314 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR2A12Q8NGT7 310 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR52P1PQ8NH57 321 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR14L1PQ8NHC6 308 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 IL31RAQ8NI17 732 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 NUBPLQ8TB37 319 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 TWIST2Q8WVJ9 160 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 TSEN15Q8WW01 171 aaKnown RBP4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 HPSE2Q8WWQ2 592 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 PHYHIPQ92561 330 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 CDS1Q92903 461 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 FBXO32Q969P5 355 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 TMEM18Q96B42 140 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 MBD6Q96DN6 1003 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 ARSGQ96EG1 525 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 DTD2Q96FN9 168 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 CLCC1Q96S66 551 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 ATP6V0BQ99437 205 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 SMOQ99835 787 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 SULT4A1Q9BR01 284 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 SLC35A5Q9BS91 424 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 ATG101Q9BSB4 218 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 NAA11Q9BSU3 229 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 ALKBH7Q9BT30 221 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF471Q9BX82 626 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 WDR11Q9BZH6 1224 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 PKIBQ9C010 78 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 ATG5Q9H1Y0 275 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 ACTL8Q9H568 366 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 FAM124BQ9H5Z6 455 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 PLEKHA1Q9HB21 404 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 RHOFQ9HBH0 211 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 DNAJC4Q9NNZ3 241 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 FZD3Q9NPG1 666 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 B3GAT2Q9NPZ5 323 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 EXOSC3Q9NQT5 275 aaKnown RBP4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 SPHK2Q9NRA0 654 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 RXFP3Q9NSD7 469 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 ASF1BQ9NVP2 202 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 RBM22Q9NW64 420 aaKnown RBP eCLIP4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 FOXJ2Q9P0K8 574 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 KLHL8Q9P2G9 620 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 SRPK3Q9UPE1 567 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 CORO2BQ9UQ03 480 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 FAM50BQ9Y247 325 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 LSM2Q9Y333 95 aaKnown RBP4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 MRPS2Q9Y399 296 aaKnown RBP4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 FIS1Q9Y3D6 152 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR10H1Q9Y4A9 318 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 COLEC10Q9Y6Z7 277 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 RGPD2P0DJD1 1756 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 MAST2Q6P0Q8 1798 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 DIP2BQ9P265 1576 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 ANKRD31Q8N7Z5 1873 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 ARAP2Q8WZ64 1704 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 PEAK1Q9H792 1746 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 C7orf77A4D0Y5 90 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 PRAMEF25A6NGN4 478 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 C9orf118A6NHY6 69 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 A8MT66 165 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 B4DEV8 164 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 F5H0A9 414 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 F5H423 210 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 J3KR12 359 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 SCDO00767 359 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 TAAR5O14804 337 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 ADAMTS3O15072 1205 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 SEPT4O43236 478 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 LAMTOR5O43504 91 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 CDC40O60508 579 aaKnown RBP eCLIP4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 ADAP1O75689 374 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 YIF1AO95070 293 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR2C1O95371 312 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 SOD1P00441 154 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 VTNP04004 478 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 CD5P06127 495 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 ALPIP09923 528 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 SFTA3P0C7M3 94 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 PRR35P0CG20 571 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 SLC35E2BP0CK96 405 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 FOLR1P15328 257 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 SRMP19623 302 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 MAOAP21397 527 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 GPD1P21695 349 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 IDSP22304 550 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 GLRA1P23415 457 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 KLRK1P26718 216 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 EPHA8P29322 1005 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 PTPN6P29350 595 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms