RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 CHMP1BQ7LBR1 199 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 CEACAM19Q7Z692 300 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 ISCA2Q86U28 154 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 AKAP14Q86UN6 197 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 MCOLN2Q8IZK6 566 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 ZNF441Q8N8Z8 693 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 ATP6V1C2Q8NEY4 427 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 OR5D18Q8NGL1 313 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 OR6K6Q8NGW6 343 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 OR2L2Q8NH16 312 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 ITFG1Q8TB96 612 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 PYROXD1Q8WU10 500 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 TCTEX1D2Q8WW35 142 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 TMED6Q8WW62 240 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 IFT81Q8WYA0 676 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 OR8D1Q8WZ84 308 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 DYNLL2Q96FJ2 89 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 MS4A14Q96JA4 679 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 RCHY1Q96PM5 261 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 OR5B12Q96R08 314 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 CYP2S1Q96SQ9 504 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 HSD17B14Q9BPX1 270 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 CCDC28BQ9BUN5 200 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 CWH43Q9H720 699 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 TRIM45Q9H8W5 580 aaPredicted RBP3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 NLE1Q9NVX2 485 aaPredicted RBP3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 PAK1IP1Q9NWT1 392 aaPredicted RBP3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 ELOVL2Q9NXB9 296 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 DUX4Q9UBX2 424 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 LGALS13Q9UHV8 139 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 NTNG1Q9Y2I2 539 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 PLLPQ9Y342 182 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 RNF114Q9Y508 228 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 HS3ST3B1Q9Y662 390 aa3.34□□□□□ -1.87
RNU4-60P-201ENST00000517239 CNTNAP1P78357 1384 aa3.34□□□□□ -1.88
RNU4-60P-201ENST00000517239 IGLV5-39A0A0G2JS06 123 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 BCLAF3A2AJT9 711 aaKnown RBP3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 WDR91A4D1P6 747 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 OTOL1A6NHN0 477 aaPredicted RBP3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 LINC01548A6NM66 108 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 A8MX80 341 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 TMEM114B3SHH9 223 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 E5RJQ4 531 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 PRKNO60260 465 aaPredicted RBP3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 RAMP1O60894 148 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 UTS2O95399 124 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 TDP2O95551 362 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 NUDT14O95848 222 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 C2P06681 752 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 RPS17P08708 135 aaKnown RBP3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 CTXN2P0C2S0 81 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 OCM2P0CE71 109 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 IL12AP29459 219 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 PRKAR2BP31323 418 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 COILP38432 576 aaPredicted RBP3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 ELK3P41970 407 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 MAGEA3P43357 314 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 RFX2P48378 723 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 PCYT1AP49585 367 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 RGS6P49758 472 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 CLDN6P56747 220 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 OR2B8PP59922 312 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 POLR2GP62487 172 aaKnown RBP eCLIP3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 MRPS25P82663 173 aaKnown RBP3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 VLDLRP98155 873 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 CYP24A1Q07973 514 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 MED21Q13503 144 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 GGTLC2Q14390 218 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 P2RY6Q15077 328 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 ZIC1Q15915 447 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 PSMD5Q16401 504 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 HLFQ16534 295 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 SGCAQ16586 387 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 C5orf64Q2M2E5 130 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 ANKRD26P1Q6NSI1 321 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 ARMCX5Q6P1M9 558 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 ZNF549Q6P9A3 640 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 STOX1Q6ZVD7 989 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 COX15Q7KZN9 410 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 PGAM4Q8N0Y7 254 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 ABHD12Q8N2K0 398 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 IQCF1Q8N6M8 205 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 ACOT4Q8N9L9 421 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 OR2Y1Q8NGV0 311 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 OR2G2Q8NGZ5 317 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 RNASEH2CQ8TDP1 164 aaKnown RBP3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 CXorf40AQ8TE69 158 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 CDS1Q92903 461 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 MOCOSQ96EN8 888 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 FAM218AQ96MZ4 157 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 OR8B4Q96RC9 309 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 FOXC2Q99958 501 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 FAIM2Q9BWQ8 316 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 MMP28Q9H239 520 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 OR51B6Q9H340 312 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 UBE2ZQ9H832 354 aaPredicted RBP3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 FOLH1BQ9HBA9 442 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 ISYNA1Q9NPH2 558 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 IFT46Q9NQC8 304 aa3.33□□□□□ -1.88
RNU4-60P-201ENST00000517239 PLEKHJ1Q9NW61 149 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms