RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 CSF3P09919 207 aa-2.38□□□□□ -2.79
RNU6-539P-201ENST00000516665 GKN3PP0CG01 181 aa-2.38□□□□□ -2.79
RNU6-539P-201ENST00000516665 UROSP10746 265 aa-2.38□□□□□ -2.79
RNU6-539P-201ENST00000516665 SERPINA2P20848 420 aa-2.38□□□□□ -2.79
RNU6-539P-201ENST00000516665 DTYMKP23919 212 aa-2.38□□□□□ -2.79
RNU6-539P-201ENST00000516665 F2RP25116 425 aa-2.38□□□□□ -2.79
RNU6-539P-201ENST00000516665 GPR4P46093 362 aa-2.38□□□□□ -2.79
RNU6-539P-201ENST00000516665 SGSHP51688 502 aa-2.38□□□□□ -2.79
RNU6-539P-201ENST00000516665 ELF3P78545 371 aaPredicted RBP-2.38□□□□□ -2.79
RNU6-539P-201ENST00000516665 CRADDP78560 199 aa-2.38□□□□□ -2.79
RNU6-539P-201ENST00000516665 NPRL3Q12980 569 aa-2.38□□□□□ -2.79
RNU6-539P-201ENST00000516665 PPFIA1Q13136 1202 aa-2.38□□□□□ -2.79
RNU6-539P-201ENST00000516665 MAB21L1Q13394 359 aa-2.38□□□□□ -2.79
RNU6-539P-201ENST00000516665 STXBP2Q15833 593 aa-2.38□□□□□ -2.79
RNU6-539P-201ENST00000516665 TIGD3Q6B0B8 471 aa-2.38□□□□□ -2.79
RNU6-539P-201ENST00000516665 FAM199XQ6PEV8 388 aaPredicted RBP-2.38□□□□□ -2.79
RNU6-539P-201ENST00000516665 DEGS2Q6QHC5 323 aa-2.38□□□□□ -2.79
RNU6-539P-201ENST00000516665 H2AFVQ71UI9 128 aa-2.38□□□□□ -2.79
RNU6-539P-201ENST00000516665 VN1R4Q7Z5H5 301 aa-2.38□□□□□ -2.79
RNU6-539P-201ENST00000516665 OR5T1Q8NG75 326 aa-2.38□□□□□ -2.79
RNU6-539P-201ENST00000516665 ZNF420Q8TAQ5 688 aaPredicted RBP-2.38□□□□□ -2.79
RNU6-539P-201ENST00000516665 TMEM131Q92545 1883 aa-2.38□□□□□ -2.79
RNU6-539P-201ENST00000516665 CITED1Q99966 193 aa-2.38□□□□□ -2.79
RNU6-539P-201ENST00000516665 ERVK-19Q9WJR5 959 aa-2.38□□□□□ -2.79
RNU6-539P-201ENST00000516665 CEMIPQ8WUJ3 1361 aa-2.38□□□□□ -2.79
RNU6-539P-201ENST00000516665 MAP1BP46821 2468 aaKnown RBP-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 FLGP20930 4061 aaPredicted RBP-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 F8P00451 2351 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 IGLV3-9A0A075B6K5 115 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 IGKV1D-13A0A0B4J2D9 117 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 TRBV6-5A0A0K0K1A5 114 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 PP2D1A8MPX8 630 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 C12orf71A8MTZ7 269 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 A8MUN3 132 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 C12orf77C9JDV5 145 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 H3BQ85 93 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 UPK2O00526 184 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 KMOO15229 486 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 PLIN1O60240 522 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 OR7C2O60412 319 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 ALDOBP05062 364 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 ARG1P05089 322 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 VIMP08670 466 aaKnown RBP-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 IGKV1-13P0DP09 117 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 B4GALT1P15291 398 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 PRPS1L1P21108 318 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 AQP2P41181 271 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 TNFSF10P50591 281 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 SP4Q02446 784 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 OXA1LQ15070 435 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 PON2Q15165 354 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 RALBP1Q15311 655 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 LRIT3Q3SXY7 679 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 EPC2Q52LR7 807 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 CYBRD1Q53TN4 286 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 SPINK9Q5DT21 86 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 GPRC6AQ5T6X5 926 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 ZNF493Q6ZR52 646 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 LHFPL3Q86UP9 236 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 RANBP3LQ86VV4 465 aaPredicted RBP-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 HOMEZQ8IX15 550 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 MUC15Q8N387 334 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 OR2V1Q8NHB1 315 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 GPR82Q96P67 336 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 ISCA1Q9BUE6 129 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 CYP39A1Q9NYL5 469 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 CADPSQ9ULU8 1353 aa-2.39□□□□□ -2.79
RNU6-539P-201ENST00000516665 A0A1B0GU33 70 aa-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 ZNF726A6NNF4 738 aa-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 H3BMH7 237 aa-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 SLC31A1O15431 190 aa-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 CFLARO15519 480 aa-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 FABP3P05413 133 aa-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 GNALP38405 381 aa-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 GNPDA1P46926 289 aa-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 HCCSP53701 268 aa-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 MZT1Q08AG7 82 aa-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 TFCP2Q12800 502 aa-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 RGNQ15493 299 aa-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 SLC30A6Q6NXT4 461 aa-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 BTNL3Q6UXE8 466 aa-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 CLEC18BQ6UXF7 455 aa-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 CYP26C1Q6V0L0 522 aa-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 PPP1R21Q6ZMI0 780 aa-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 LDHAL6AQ6ZMR3 332 aa-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 SVOPLQ8N434 492 aa-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 TTC39CQ8N584 583 aa-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 ZIC4Q8N9L1 334 aa-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 Q8NAQ8 132 aa-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 OR8K1Q8NGG5 319 aa-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 HAS2Q92819 552 aa-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 CCDC114Q96M63 670 aa-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 ZNF558Q96NG5 402 aa-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 RASL10BQ96S79 203 aa-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 MARVELD1Q9BSK0 173 aa-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 RIOK2Q9BVS4 552 aaKnown RBP-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 GABARAPL3Q9BY60 117 aa-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 TRPV6Q9H1D0 765 aa-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 VSIRQ9H7M9 311 aa-2.4□□□□□ -2.79
RNU6-539P-201ENST00000516665 ACOXLQ9NUZ1 547 aa-2.4□□□□□ -2.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms