RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 SH3YL1Q96HL8 342 aaPredicted RBP2.27□□□□□ -2.05
LINC01088-211ENST00000515597 FAM210BQ96KR6 192 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 RIT2Q99578 217 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 RASL11BQ9BPW5 248 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 POLR1EQ9GZS1 481 aaKnown RBP2.27□□□□□ -2.05
LINC01088-211ENST00000515597 COA1Q9GZY4 146 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 TMEM117Q9H0C3 514 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 CALHM2Q9HA72 323 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 FARSBQ9NSD9 589 aaKnown RBP2.27□□□□□ -2.05
LINC01088-211ENST00000515597 AATFQ9NY61 560 aaKnown RBP eCLIP2.27□□□□□ -2.05
LINC01088-211ENST00000515597 ERVW-1Q9UQF0 538 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 V9GY05 133 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 A0A1B0GUL6 1792 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 MYO7AQ13402 2215 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 AKAP13Q12802 2813 aa2.27□□□□□ -2.05
LINC01088-211ENST00000515597 TET1Q8NFU7 2136 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 DNHD1Q96M86 4753 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 MYO3BQ8WXR4 1341 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 ITPR1Q14643 2758 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 ZSCAN12O43309 604 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 OR1F1O43749 312 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 OR10H3O60404 316 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 ICOSLGO75144 302 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 IDH1O75874 414 aaKnown RBP2.26□□□□□ -2.05
LINC01088-211ENST00000515597 MMP1P03956 469 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 LGALS2P05162 132 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 NCF1P14598 390 aaPredicted RBP2.26□□□□□ -2.05
LINC01088-211ENST00000515597 NT5EP21589 574 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 RPS10P46783 165 aaKnown RBP2.26□□□□□ -2.05
LINC01088-211ENST00000515597 CCL23P55773 120 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 HERVK_113P61574 105 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 SIGLEC14Q08ET2 396 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 PJVKQ0ZLH3 352 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 MESDQ14696 234 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 TCEAL5Q5H9L2 206 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 KLF17Q5JT82 389 aaPredicted RBP2.26□□□□□ -2.05
LINC01088-211ENST00000515597 ZNF691Q5VV52 312 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 ZNF429Q86V71 674 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 LRRC43Q8N309 656 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 ZNF786Q8N393 782 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 FTMTQ8N4E7 242 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 MDS2Q8NDY4 140 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 OR51G1Q8NGK1 321 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 OR5L2Q8NGL0 311 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 OR6X1Q8NH79 312 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 BRSK1Q8TDC3 778 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 HTR3CQ8WXA8 447 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 CHCHD10Q8WYQ3 142 aaPredicted RBP2.26□□□□□ -2.05
LINC01088-211ENST00000515597 RPUSD4Q96CM3 377 aaKnown RBP2.26□□□□□ -2.05
LINC01088-211ENST00000515597 C4orf36Q96KX1 117 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 C7orf34Q96L11 122 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 CCNL2Q96S94 520 aaPredicted RBP2.26□□□□□ -2.05
LINC01088-211ENST00000515597 TUBGCP2Q9BSJ2 902 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 RHBGQ9H310 441 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 KIF25Q9UIL4 384 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 ZNF223Q9UK11 482 aaPredicted RBP2.26□□□□□ -2.05
LINC01088-211ENST00000515597 RASD1Q9Y272 281 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 OR10H1Q9Y4A9 318 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 HECTD1Q9ULT8 2610 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 ZNF462Q96JM2 2506 aa2.26□□□□□ -2.05
LINC01088-211ENST00000515597 DMXL2Q8TDJ6 3036 aa2.25□□□□□ -2.05
LINC01088-211ENST00000515597 FANCMQ8IYD8 2048 aa2.25□□□□□ -2.05
LINC01088-211ENST00000515597 IGSF10Q6WRI0 2623 aa2.25□□□□□ -2.05
LINC01088-211ENST00000515597 RELNP78509 3460 aa2.25□□□□□ -2.05
LINC01088-211ENST00000515597 LAMA5O15230 3695 aa2.25□□□□□ -2.05
LINC01088-211ENST00000515597 VSTM2BA6NLU5 285 aa2.25□□□□□ -2.05
LINC01088-211ENST00000515597 CXCL13O43927 109 aa2.25□□□□□ -2.05
LINC01088-211ENST00000515597 DFNA5O60443 496 aa2.25□□□□□ -2.05
LINC01088-211ENST00000515597 RBMY1CP0DJD4 496 aa2.25□□□□□ -2.05
LINC01088-211ENST00000515597 POU2F1P14859 743 aa2.25□□□□□ -2.05
LINC01088-211ENST00000515597 RCC1P18754 421 aaPredicted RBP2.25□□□□□ -2.05
LINC01088-211ENST00000515597 SHMT2P34897 504 aa2.25□□□□□ -2.05
LINC01088-211ENST00000515597 MDH1P40925 334 aaKnown RBP2.25□□□□□ -2.05
LINC01088-211ENST00000515597 TDO2P48775 406 aa2.25□□□□□ -2.05
LINC01088-211ENST00000515597 KLK7P49862 253 aa2.25□□□□□ -2.05
LINC01088-211ENST00000515597 KPNA2P52292 529 aaKnown RBP2.25□□□□□ -2.05
LINC01088-211ENST00000515597 SUCLG1P53597 346 aaKnown RBP2.25□□□□□ -2.05
LINC01088-211ENST00000515597 NRF1Q16656 503 aa2.25□□□□□ -2.05
LINC01088-211ENST00000515597 NSUN5P1Q3KNT7 163 aa2.25□□□□□ -2.05
LINC01088-211ENST00000515597 NCR3LG1Q68D85 454 aa2.25□□□□□ -2.05
LINC01088-211ENST00000515597 ZNF571Q7Z3V5 609 aaPredicted RBP2.25□□□□□ -2.05
LINC01088-211ENST00000515597 CLEC4FQ8N1N0 589 aa2.25□□□□□ -2.05
LINC01088-211ENST00000515597 MARCH1Q8TCQ1 289 aa2.25□□□□□ -2.05
LINC01088-211ENST00000515597 SEC22AQ96IW7 307 aa2.25□□□□□ -2.05
LINC01088-211ENST00000515597 KCNA7Q96RP8 456 aa2.25□□□□□ -2.05
LINC01088-211ENST00000515597 TSG101Q99816 390 aa2.25□□□□□ -2.05
LINC01088-211ENST00000515597 OMDQ99983 421 aa2.25□□□□□ -2.05
LINC01088-211ENST00000515597 NIPSNAP3BQ9BS92 247 aa2.25□□□□□ -2.05
LINC01088-211ENST00000515597 VCPKMTQ9H867 229 aa2.25□□□□□ -2.05
LINC01088-211ENST00000515597 COQ10BQ9H8M1 238 aa2.25□□□□□ -2.05
LINC01088-211ENST00000515597 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.25□□□□□ -2.05
LINC01088-211ENST00000515597 COPS3Q9UNS2 423 aa2.25□□□□□ -2.05
LINC01088-211ENST00000515597 TRAF3IP3Q9Y228 551 aa2.25□□□□□ -2.05
LINC01088-211ENST00000515597 AK6Q9Y3D8 172 aaKnown RBP2.25□□□□□ -2.05
LINC01088-211ENST00000515597 DSPP15924 2871 aaKnown RBP2.24□□□□□ -2.05
LINC01088-211ENST00000515597 MYO18BQ8IUG5 2567 aa2.24□□□□□ -2.05
LINC01088-211ENST00000515597 SPEF2Q9C093 1822 aa2.24□□□□□ -2.05
LINC01088-211ENST00000515597 IGHV1OR21-1A0A087WYE8 117 aa2.24□□□□□ -2.05
LINC01088-211ENST00000515597 RGSL1A5PLK6 1076 aa2.24□□□□□ -2.05
LINC01088-211ENST00000515597 A6NIZ1 184 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms