RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 PEX2P28328 305 aa9.03□□□□□ -0.96
NEDD9-214ENST00000513989 GIPRP48546 466 aa9.03□□□□□ -0.96
NEDD9-214ENST00000513989 PTDSS1P48651 473 aaKnown RBP9.03□□□□□ -0.96
NEDD9-214ENST00000513989 P2RY4P51582 365 aa9.03□□□□□ -0.96
NEDD9-214ENST00000513989 RPL27P61353 136 aaKnown RBP9.03□□□□□ -0.96
NEDD9-214ENST00000513989 ERVK-25P63136 954 aa9.03□□□□□ -0.96
NEDD9-214ENST00000513989 NPRL3Q12980 569 aa9.03□□□□□ -0.96
NEDD9-214ENST00000513989 SLC36A3Q495N2 470 aa9.03□□□□□ -0.96
NEDD9-214ENST00000513989 CLEC12AQ5QGZ9 265 aa9.03□□□□□ -0.96
NEDD9-214ENST00000513989 ABLIM2Q6H8Q1 611 aa9.03□□□□□ -0.96
NEDD9-214ENST00000513989 RTL6Q6ICC9 239 aa9.03□□□□□ -0.96
NEDD9-214ENST00000513989 C3P1Q6ZMU1 363 aa9.03□□□□□ -0.96
NEDD9-214ENST00000513989 AAED1Q7RTV5 226 aa9.03□□□□□ -0.96
NEDD9-214ENST00000513989 EPHX4Q8IUS5 362 aa9.03□□□□□ -0.96
NEDD9-214ENST00000513989 TUSC5Q8IXB3 177 aa9.03□□□□□ -0.96
NEDD9-214ENST00000513989 CNEP1R1Q8N9A8 125 aa9.03□□□□□ -0.96
NEDD9-214ENST00000513989 FNDC8Q8TC99 324 aa9.03□□□□□ -0.96
NEDD9-214ENST00000513989 ABHD3Q8WU67 409 aa9.03□□□□□ -0.96
NEDD9-214ENST00000513989 PLEKHA8Q96JA3 519 aa9.03□□□□□ -0.96
NEDD9-214ENST00000513989 ERMAPQ96PL5 475 aaPredicted RBP9.03□□□□□ -0.96
NEDD9-214ENST00000513989 SLC38A2Q96QD8 506 aa9.03□□□□□ -0.96
NEDD9-214ENST00000513989 RBP7Q96R05 134 aa9.03□□□□□ -0.96
NEDD9-214ENST00000513989 GPX7Q96SL4 187 aaPredicted RBP9.03□□□□□ -0.96
NEDD9-214ENST00000513989 SLC29A1Q99808 456 aa9.03□□□□□ -0.96
NEDD9-214ENST00000513989 KATNB1Q9BVA0 655 aa9.03□□□□□ -0.96
NEDD9-214ENST00000513989 SFXN3Q9BWM7 321 aa9.03□□□□□ -0.96
NEDD9-214ENST00000513989 RIBC2Q9H4K1 309 aa9.03□□□□□ -0.96
NEDD9-214ENST00000513989 EGLN3Q9H6Z9 239 aa9.03□□□□□ -0.96
NEDD9-214ENST00000513989 B3GAT2Q9NPZ5 323 aa9.03□□□□□ -0.96
NEDD9-214ENST00000513989 SMPD3Q9NY59 655 aaPredicted RBP9.03□□□□□ -0.96
NEDD9-214ENST00000513989 COQ3Q9NZJ6 369 aa9.03□□□□□ -0.96
NEDD9-214ENST00000513989 REV1Q9UBZ9 1251 aa9.03□□□□□ -0.96
NEDD9-214ENST00000513989 SEC14L4Q9UDX3 406 aa9.03□□□□□ -0.96
NEDD9-214ENST00000513989 ZNF346Q9UL40 294 aaKnown RBP9.03□□□□□ -0.96
NEDD9-214ENST00000513989 IER3IP1Q9Y5U9 82 aa9.03□□□□□ -0.96
NEDD9-214ENST00000513989 SETD2Q9BYW2 2564 aaPredicted RBP9.03□□□□□ -0.96
NEDD9-214ENST00000513989 ZNF716A6NP11 495 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 CENPBD1B2RD01 187 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 ZNF814B7Z6K7 855 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 DVL2O14641 736 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 ARPC3O15145 178 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 LRRTM2O43300 516 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 SLC43A1O75387 559 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 SOX14O95416 240 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 IGHG1P01857 330 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 ZNF26P17031 533 aaPredicted RBP9.02□□□□□ -0.97
NEDD9-214ENST00000513989 SDHAP31040 664 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 CEACAM8P31997 349 aaPredicted RBP9.02□□□□□ -0.97
NEDD9-214ENST00000513989 VHLP40337 213 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 GUCA1AP43080 201 aaPredicted RBP9.02□□□□□ -0.97
NEDD9-214ENST00000513989 HSPA13P48723 471 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 CLDN17P56750 224 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 GINS1Q14691 196 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 PTGES3Q15185 160 aaKnown RBP9.02□□□□□ -0.97
NEDD9-214ENST00000513989 ACKR1Q16570 336 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 TTC23Q5W5X9 447 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 FBXW10Q5XX13 1052 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 CASP12Q6UXS9 341 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 ABHD12BQ7Z5M8 362 aaPredicted RBP9.02□□□□□ -0.97
NEDD9-214ENST00000513989 JAZF1Q86VZ6 243 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 LNX2Q8N448 690 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 C9orf106Q8NAJ2 232 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 OR6K3Q8NGY3 331 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 OR6X1Q8NH79 312 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 ASB5Q8WWX0 329 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 ZNF566Q969W8 418 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 TMEM45BQ96B21 275 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 APH1AQ96BI3 265 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 ZNF775Q96BV0 537 aaPredicted RBP9.02□□□□□ -0.97
NEDD9-214ENST00000513989 SLC25A44Q96H78 314 aaPredicted RBP9.02□□□□□ -0.97
NEDD9-214ENST00000513989 LRR1Q96L50 414 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 ZNF570Q96NI8 536 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 PIGMQ9H3S5 423 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 NRIP3Q9NQ35 241 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 B3GAT1Q9P2W7 334 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 UPB1Q9UBR1 384 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 IL20RAQ9UHF4 553 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 TMEFF2Q9UIK5 374 aaPredicted RBP9.02□□□□□ -0.97
NEDD9-214ENST00000513989 KLHL21Q9UJP4 597 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 CLEC4AQ9UMR7 237 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 RCE1Q9Y256 329 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 FAM215AQ9Y5M1 114 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 FLVCR1Q9Y5Y0 555 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 HEATR5AQ86XA9 2040 aa9.02□□□□□ -0.97
NEDD9-214ENST00000513989 EML6Q6ZMW3 1958 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 LOC100130705A0A1B0GUX0 176 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 SLC35F4A4IF30 521 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 RIIAD1A6NNX1 92 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 ARHGEF9O43307 516 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 RAMP1O60894 148 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 MITFO75030 526 aaPredicted RBP9.01□□□□□ -0.97
NEDD9-214ENST00000513989 CNOT4O95628 575 aaKnown RBP9.01□□□□□ -0.97
NEDD9-214ENST00000513989 TXNDC12O95881 172 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 RENP00797 406 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 IGHMP01871 453 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 HLA-DOBP13765 273 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 PRF1P14222 555 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 ACADSP16219 412 aa9.01□□□□□ -0.97
NEDD9-214ENST00000513989 PAICSP22234 425 aaKnown RBP9.01□□□□□ -0.97
NEDD9-214ENST00000513989 GRK5P34947 590 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms