RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 PSMD8P48556 350 aa0.77□□□□□ -2.29
PDGFC-208ENST00000512711 CYB561P49447 251 aa0.77□□□□□ -2.29
PDGFC-208ENST00000512711 CASP4P49662 377 aa0.77□□□□□ -2.29
PDGFC-208ENST00000512711 IL15RAQ13261 267 aa0.77□□□□□ -2.29
PDGFC-208ENST00000512711 C1orf61Q13536 156 aa0.77□□□□□ -2.29
PDGFC-208ENST00000512711 BEND3Q5T5X7 828 aa0.77□□□□□ -2.29
PDGFC-208ENST00000512711 SAXO2Q658L1 398 aa0.77□□□□□ -2.29
PDGFC-208ENST00000512711 CEMP1Q6PRD7 247 aaPredicted RBP0.77□□□□□ -2.29
PDGFC-208ENST00000512711 MOB3BQ86TA1 216 aa0.77□□□□□ -2.29
PDGFC-208ENST00000512711 CLDN19Q8N6F1 224 aa0.77□□□□□ -2.29
PDGFC-208ENST00000512711 ACOT4Q8N9L9 421 aa0.77□□□□□ -2.29
PDGFC-208ENST00000512711 OR52H1Q8NGJ2 320 aa0.77□□□□□ -2.29
PDGFC-208ENST00000512711 OR10T2Q8NGX3 314 aa0.77□□□□□ -2.29
PDGFC-208ENST00000512711 HMG20AQ9NP66 347 aa0.77□□□□□ -2.29
PDGFC-208ENST00000512711 GPATCH2LQ9NWQ4 482 aa0.77□□□□□ -2.29
PDGFC-208ENST00000512711 MSH6P52701 1360 aa0.77□□□□□ -2.29
PDGFC-208ENST00000512711 ADGRL1O94910 1474 aa0.77□□□□□ -2.29
PDGFC-208ENST00000512711 ADAMTS13Q76LX8 1427 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 A0A1B0GW55 424 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 HSD17B6O14756 317 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 RASGRF2O14827 1237 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 RGS16O15492 202 aaPredicted RBP0.76□□□□□ -2.29
PDGFC-208ENST00000512711 RHOBTB1O94844 696 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 GABARAPO95166 117 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 IL4P05112 153 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 DUX4L2P0CJ85 424 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 DUX4L3P0CJ86 424 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 DUX4L5P0CJ88 424 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 DUX4L6P0CJ89 424 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 DUX4L7P0CJ90 424 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 OPRK1P41145 380 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 MAP3K8P41279 467 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 CSNK1A1P48729 337 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 CX3CR1P49238 355 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 IL1RL1Q01638 556 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 ERCC8Q13216 396 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 PLD1Q13393 1074 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 PON3Q15166 354 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 DUSP7Q16829 419 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 RAB12Q6IQ22 244 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 PRMT9Q6P2P2 845 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 ZNF493Q6ZR52 646 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 RBM43Q6ZSC3 357 aaKnown RBP0.76□□□□□ -2.29
PDGFC-208ENST00000512711 CCDC65Q8IXS2 484 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 IPMKQ8NFU5 416 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 OR1P1Q8NH06 330 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 OR1F12Q8NHA8 337 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 CIRBP-AS1Q8TBR5 109 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 OSTF1Q92882 214 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 SH3YL1Q96HL8 342 aaPredicted RBP0.76□□□□□ -2.29
PDGFC-208ENST00000512711 NARS2Q96I59 477 aaKnown RBP0.76□□□□□ -2.29
PDGFC-208ENST00000512711 RNF157Q96PX1 679 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 FAM111AQ96PZ2 611 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 LZTS2Q9BRK4 669 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 HSD3B7Q9H2F3 369 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 LINC00597Q9H2U6 94 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 DHX35Q9H5Z1 703 aaKnown RBP0.76□□□□□ -2.29
PDGFC-208ENST00000512711 RANBP3Q9H6Z4 567 aaPredicted RBP0.76□□□□□ -2.29
PDGFC-208ENST00000512711 GIN1Q9NXP7 522 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 DHCR7Q9UBM7 475 aaKnown RBP0.76□□□□□ -2.29
PDGFC-208ENST00000512711 DUX4Q9UBX2 424 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 PACSIN2Q9UNF0 486 aaPredicted RBP0.76□□□□□ -2.29
PDGFC-208ENST00000512711 COPS3Q9UNS2 423 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 MEMO1Q9Y316 297 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 SVILO95425 2214 aa0.76□□□□□ -2.29
PDGFC-208ENST00000512711 AHDC1Q5TGY3 1603 aaPredicted RBP0.75□□□□□ -2.29
PDGFC-208ENST00000512711 DNASE2O00115 360 aaPredicted RBP0.75□□□□□ -2.29
PDGFC-208ENST00000512711 BTN3A3O00478 584 aa0.75□□□□□ -2.29
PDGFC-208ENST00000512711 PLXNB1O43157 2135 aa0.75□□□□□ -2.29
PDGFC-208ENST00000512711 RP2O75695 350 aa0.75□□□□□ -2.29
PDGFC-208ENST00000512711 MT-ND3P03897 115 aa0.75□□□□□ -2.29
PDGFC-208ENST00000512711 GAPDHP04406 335 aaKnown RBP0.75□□□□□ -2.29
PDGFC-208ENST00000512711 GNAO1P09471 354 aa0.75□□□□□ -2.29
PDGFC-208ENST00000512711 OR56A5P0C7T3 313 aa0.75□□□□□ -2.29
PDGFC-208ENST00000512711 CDKN2BP42772 138 aa0.75□□□□□ -2.29
PDGFC-208ENST00000512711 NAMPTP43490 491 aa0.75□□□□□ -2.29
PDGFC-208ENST00000512711 NPBWR2P48146 333 aa0.75□□□□□ -2.29
PDGFC-208ENST00000512711 ACADVLP49748 655 aa0.75□□□□□ -2.29
PDGFC-208ENST00000512711 CDH4P55283 916 aa0.75□□□□□ -2.29
PDGFC-208ENST00000512711 PDZK1IP1Q13113 114 aa0.75□□□□□ -2.29
PDGFC-208ENST00000512711 BAMBIQ13145 260 aa0.75□□□□□ -2.29
PDGFC-208ENST00000512711 SNRNP35Q16560 246 aaKnown RBP0.75□□□□□ -2.29
PDGFC-208ENST00000512711 FAM78AQ5JUQ0 283 aa0.75□□□□□ -2.29
PDGFC-208ENST00000512711 SLC10A5Q5PT55 438 aa0.75□□□□□ -2.29
PDGFC-208ENST00000512711 PYHIN1Q6K0P9 492 aa0.75□□□□□ -2.29
PDGFC-208ENST00000512711 TMEM205Q6UW68 189 aa0.75□□□□□ -2.29
PDGFC-208ENST00000512711 H2AFVQ71UI9 128 aa0.75□□□□□ -2.29
PDGFC-208ENST00000512711 SNX32Q86XE0 403 aa0.75□□□□□ -2.29
PDGFC-208ENST00000512711 MREGQ8N565 214 aa0.75□□□□□ -2.29
PDGFC-208ENST00000512711 FAM133AQ8N9E0 248 aa0.75□□□□□ -2.29
PDGFC-208ENST00000512711 MGARPQ8TDB4 240 aa0.75□□□□□ -2.29
PDGFC-208ENST00000512711 SPRYD4Q8WW59 207 aaPredicted RBP0.75□□□□□ -2.29
PDGFC-208ENST00000512711 UFD1Q92890 307 aa0.75□□□□□ -2.29
PDGFC-208ENST00000512711 SGK3Q96BR1 496 aa0.75□□□□□ -2.29
PDGFC-208ENST00000512711 EFHD2Q96C19 240 aaPredicted RBP0.75□□□□□ -2.29
PDGFC-208ENST00000512711 SPXQ9BT56 116 aa0.75□□□□□ -2.29
PDGFC-208ENST00000512711 ZSCAN5AQ9BUG6 496 aa0.75□□□□□ -2.29
PDGFC-208ENST00000512711 ZNF717Q9BY31 904 aaPredicted RBP0.75□□□□□ -2.29
PDGFC-208ENST00000512711 ANGPTL4Q9BY76 406 aa0.75□□□□□ -2.29
PDGFC-208ENST00000512711 GBA3Q9H227 469 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms