RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 ZNF738Q8NE65 137 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 OR52N4Q8NGI2 321 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 PIGXQ8TBF5 258 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 APH1BQ8WW43 257 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 IL17FQ96PD4 163 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 TIPINQ9BVW5 301 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 ILKAPQ9H0C8 392 aaPredicted RBP5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 SLC25A51Q9H1U9 297 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 NOX4Q9NPH5 578 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 SYBUQ9NX95 663 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 ZNF282Q9UDV7 671 aaPredicted RBP5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 MROH7Q68CQ1 1323 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 DUOX1Q9NRD9 1551 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 MAST2Q6P0Q8 1798 aa5.55□□□□□ -1.52
TRAPPC11-209ENST00000512476 HMX2A2RU54 273 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 ZNF233A6NK53 670 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 SLC22A20A6NK97 555 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 KPNA3O00505 521 aaPredicted RBP5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 PSTPIP1O43586 416 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 TRIAP1O43715 76 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 SNX3O60493 162 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 RAD1O60671 282 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 C1orf105O95561 183 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 CYB5R3P00387 301 aaPredicted RBP5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 MMP1P03956 469 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 VSIG8P0DPA2 414 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 ADRB3P13945 408 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 OR10A3P58181 314 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 SSBP2P81877 361 aaPredicted RBP5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 KLRB1Q12918 225 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 KRR1Q13601 381 aaKnown RBP5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 PRTGQ2VWP7 1150 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 ASPHD1Q5U4P2 390 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 ACSM5Q6NUN0 579 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 BHLHB9Q6PI77 547 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 GPR135Q8IZ08 494 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 LRRC18Q8N456 261 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 KYQ8NBH2 561 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 ARRDC2Q8TBH0 407 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 NELFBQ8WX92 580 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 DYRK2Q92630 601 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 MS4A14Q96JA4 679 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 XPO6Q96QU8 1125 aaKnown RBP5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 MAP3K3Q99759 626 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 OR10A2Q9H208 303 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 RHOFQ9HBH0 211 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 GALNT9Q9HCQ5 603 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 B3GAT2Q9NPZ5 323 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 B4GALT7Q9UBV7 327 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 SPIN1Q9Y657 262 aaPredicted RBP5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 C10orf71Q711Q0 1435 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 TRBV9A0A0B4J1U6 114 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 C9J4A7 227 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 TCAPO15273 167 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 F13BP05160 661 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 CDK1P06493 297 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 CT45A8P0DMV1 189 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 CT45A9P0DMV2 189 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 GLP1RP43220 463 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 QARSP47897 775 aaKnown RBP5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 RFX3P48380 749 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 DNASE1L1P49184 302 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 FUT6P51993 359 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 SUMO2P61956 95 aaKnown RBP5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 RAB31Q13636 194 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 ANXA2RQ3ZCQ2 193 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 PAN3Q58A45 887 aaKnown RBP5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 CT45A2Q5DJT8 189 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 TEX30Q5JUR7 227 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 D2HGDHQ8N465 521 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 OR9A4Q8NGU2 314 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 OR2Y1Q8NGV0 311 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 OLIG1Q8TAK6 271 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 FGFBP3Q8TAT2 258 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 CD99L2Q8TCZ2 262 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 SETD7Q8WTS6 366 aaKnown RBP5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 SDR42E1Q8WUS8 393 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 SLC25A43Q8WUT9 341 aaPredicted RBP5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 CXorf40BQ96DE9 158 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 ZNF419Q96HQ0 510 aaPredicted RBP5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 ERGIC2Q96RQ1 377 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 RNF2Q99496 336 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 FAIM2Q9BWQ8 316 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 RAB11FIP5Q9BXF6 653 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 CLMPQ9H6B4 373 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 SLC17A4Q9Y2C5 497 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 COLEC10Q9Y6Z7 277 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 LAMA4Q16363 1823 aa5.54□□□□□ -1.52
TRAPPC11-209ENST00000512476 ADGRA3Q8IWK6 1321 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 A0A087X1B8 175 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 TGIF2-C20orf24A0A0A6YYL0 155 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 A0A1B0GW55 424 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 TMEM150BA6NC51 233 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 CENPXA8MT69 81 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 G3V3Y1 287 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 H7C0C1 242 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 PLPP1O14494 284 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 FGF16O43320 207 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 KIAA0513O60268 411 aa5.53□□□□□ -1.52
TRAPPC11-209ENST00000512476 HSBP1O75506 76 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms