RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 NAT2P11245 290 aa7.75□□□□□ -1.17
NUP54-211ENST00000512151 CALB2P22676 271 aa7.75□□□□□ -1.17
NUP54-211ENST00000512151 PRDX6P30041 224 aa7.75□□□□□ -1.17
NUP54-211ENST00000512151 LCN1P31025 176 aa7.75□□□□□ -1.17
NUP54-211ENST00000512151 MAGEB1P43366 347 aa7.75□□□□□ -1.17
NUP54-211ENST00000512151 PRKAG1P54619 331 aa7.75□□□□□ -1.17
NUP54-211ENST00000512151 SESN3P58005 492 aa7.75□□□□□ -1.17
NUP54-211ENST00000512151 CYLC2Q14093 348 aaPredicted RBP7.75□□□□□ -1.17
NUP54-211ENST00000512151 DAG1Q14118 895 aa7.75□□□□□ -1.17
NUP54-211ENST00000512151 HLXQ14774 488 aaPredicted RBP7.75□□□□□ -1.17
NUP54-211ENST00000512151 LRIF1Q5T3J3 769 aa7.75□□□□□ -1.17
NUP54-211ENST00000512151 ZNF621Q6ZSS3 439 aa7.75□□□□□ -1.17
NUP54-211ENST00000512151 MSANTD1Q6ZTZ1 278 aa7.75□□□□□ -1.17
NUP54-211ENST00000512151 REC114Q7Z4M0 266 aa7.75□□□□□ -1.17
NUP54-211ENST00000512151 DPP10Q8N608 796 aa7.75□□□□□ -1.17
NUP54-211ENST00000512151 OR5W2Q8NH69 310 aa7.75□□□□□ -1.17
NUP54-211ENST00000512151 ZFP28Q8NHY6 868 aa7.75□□□□□ -1.17
NUP54-211ENST00000512151 POP5Q969H6 163 aaKnown RBP7.75□□□□□ -1.17
NUP54-211ENST00000512151 RCN3Q96D15 328 aa7.75□□□□□ -1.17
NUP54-211ENST00000512151 RAB39BQ96DA2 213 aa7.75□□□□□ -1.17
NUP54-211ENST00000512151 FAM120BQ96EK7 910 aaKnown RBP7.75□□□□□ -1.17
NUP54-211ENST00000512151 AURKBQ96GD4 344 aaPredicted RBP7.75□□□□□ -1.17
NUP54-211ENST00000512151 ITCHQ96J02 903 aa7.75□□□□□ -1.17
NUP54-211ENST00000512151 PANX1Q96RD7 426 aa7.75□□□□□ -1.17
NUP54-211ENST00000512151 OR11A1Q9GZK7 315 aa7.75□□□□□ -1.17
NUP54-211ENST00000512151 NOX3Q9HBY0 568 aa7.75□□□□□ -1.17
NUP54-211ENST00000512151 GPATCH2Q9NW75 528 aa7.75□□□□□ -1.17
NUP54-211ENST00000512151 VAPAQ9P0L0 249 aa7.75□□□□□ -1.17
NUP54-211ENST00000512151 LEF1Q9UJU2 399 aaPredicted RBP7.75□□□□□ -1.17
NUP54-211ENST00000512151 FZR1Q9UM11 496 aa7.75□□□□□ -1.17
NUP54-211ENST00000512151 CMAHPQ9Y471 501 aa7.75□□□□□ -1.17
NUP54-211ENST00000512151 A0A096LPI6 279 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 VSTM5A8MXK1 200 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 FXYD1O00168 92 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 GTPBP1O00178 669 aaKnown RBP7.74□□□□□ -1.17
NUP54-211ENST00000512151 RFXANKO14593 260 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 MRASO14807 208 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 AIM2O14862 343 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 ANGPT2O15123 496 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 HOXA3O43365 443 aaPredicted RBP7.74□□□□□ -1.17
NUP54-211ENST00000512151 SEC14L2O76054 403 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 PMS2P2O95744 297 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 ZCCHC18P0CG32 403 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 CBR1P16152 277 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 CCT3P49368 545 aaKnown RBP7.74□□□□□ -1.17
NUP54-211ENST00000512151 EVX1P49640 407 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 CCR4P51679 360 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 MVDP53602 400 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 UBE2NP61088 152 aaKnown RBP7.74□□□□□ -1.17
NUP54-211ENST00000512151 H3F3AP84243 136 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 MERTKQ12866 999 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 SELPLGQ14242 412 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 SLC17A1Q14916 467 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 MAPRE2Q15555 327 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 RUNDC3AQ59EK9 446 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 ZNF362Q5T0B9 420 aaPredicted RBP7.74□□□□□ -1.17
NUP54-211ENST00000512151 RUSC1-AS1Q66K80 236 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 C8orf82Q6P1X6 216 aaPredicted RBP7.74□□□□□ -1.17
NUP54-211ENST00000512151 C6orf120Q7Z4R8 191 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 C10orf111Q8N326 155 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 TMCO5AQ8N6Q1 288 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 FAM169BQ8N8A8 192 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 CDRT4Q8N9R6 151 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 VPS37AQ8NEZ2 397 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 ZNF385AQ96PM9 386 aaKnown RBP7.74□□□□□ -1.17
NUP54-211ENST00000512151 BTBD10Q9BSF8 475 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 MS4A5Q9H3V2 200 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 SERHL2Q9H4I8 314 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 IKZF5Q9H5V7 419 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 RMND5AQ9H871 391 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 TNFRSF19Q9NS68 423 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 ZCCHC3Q9NUD5 404 aaKnown RBP7.74□□□□□ -1.17
NUP54-211ENST00000512151 MRGBPQ9NV56 204 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 PARPBPQ9NWS1 579 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 AURKAIP1Q9NWT8 199 aaPredicted RBP7.74□□□□□ -1.17
NUP54-211ENST00000512151 TAGLN3Q9UI15 199 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 KLHL21Q9UJP4 597 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 SLC9A8Q9Y2E8 581 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 WIPI2Q9Y4P8 454 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 CACNG2Q9Y698 323 aa7.74□□□□□ -1.17
NUP54-211ENST00000512151 BBIP1A8MTZ0 92 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 NPIPB9F8W1W9 429 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 TRAPPC2LH3BP13 241 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 DNAJA2O60884 412 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 CLPXO76031 633 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 IFI6P09912 130 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 IGHV4-38-2P0DP08 117 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 UQCRC2P22695 453 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 NR4A1P22736 598 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 SOAT1P35610 550 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 MAGEA8P43361 318 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 OR2B6P58173 313 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 PROK1P58294 105 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 HNRNPA0Q13151 305 aaKnown RBP7.73□□□□□ -1.17
NUP54-211ENST00000512151 NFYCQ13952 458 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 ALKBH6Q3KRA9 238 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 MMEL1Q495T6 779 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 COQ5Q5HYK3 327 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 COX20Q5RI15 118 aa7.73□□□□□ -1.17
NUP54-211ENST00000512151 C6orf10Q5SRN2 563 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms