RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 TAF15Q92804 592 aaKnown RBP eCLIP9.84□□□□□ -0.836e-6■■■■□ 22
RNF4-216ENST00000511859 ROPN1LQ96C74 230 aa9.84□□□□□ -0.83
RNF4-216ENST00000511859 ZNF837Q96EG3 531 aaPredicted RBP9.84□□□□□ -0.83
RNF4-216ENST00000511859 SLC35G5Q96KT7 338 aa9.84□□□□□ -0.83
RNF4-216ENST00000511859 ZNF75AQ96N20 296 aa9.84□□□□□ -0.83
RNF4-216ENST00000511859 GAL3ST1Q99999 423 aa9.84□□□□□ -0.83
RNF4-216ENST00000511859 OR51I1Q9H343 314 aa9.84□□□□□ -0.83
RNF4-216ENST00000511859 HINT3Q9NQE9 182 aaKnown RBP9.84□□□□□ -0.83
RNF4-216ENST00000511859 DECR2Q9NUI1 292 aa9.84□□□□□ -0.83
RNF4-216ENST00000511859 FAM53CQ9NYF3 392 aa9.84□□□□□ -0.83
RNF4-216ENST00000511859 TAAR3PQ9P1P4 343 aa9.84□□□□□ -0.83
RNF4-216ENST00000511859 SLC7A8Q9UHI5 535 aa9.84□□□□□ -0.83
RNF4-216ENST00000511859 FZR1Q9UM11 496 aa9.84□□□□□ -0.83
RNF4-216ENST00000511859 AUP1Q9Y679 476 aa9.84□□□□□ -0.83
RNF4-216ENST00000511859 CFAP73A6NFT4 308 aa9.83□□□□□ -0.84
RNF4-216ENST00000511859 TRAF3IP2O43734 574 aaPredicted RBP9.83□□□□□ -0.84
RNF4-216ENST00000511859 PEX11AO75192 247 aa9.83□□□□□ -0.84
RNF4-216ENST00000511859 HLA-HP01893 362 aa9.83□□□□□ -0.84
RNF4-216ENST00000511859 TFPTP0C1Z6 253 aa9.83□□□□□ -0.84
RNF4-216ENST00000511859 OR12D1P0DN82 309 aa9.83□□□□□ -0.84
RNF4-216ENST00000511859 PLAURQ03405 335 aa9.83□□□□□ -0.84
RNF4-216ENST00000511859 EPS8Q12929 822 aa9.83□□□□□ -0.84
RNF4-216ENST00000511859 ZNF154Q13106 437 aa9.83□□□□□ -0.84
RNF4-216ENST00000511859 RGS7BPQ6MZT1 257 aaPredicted RBP9.83□□□□□ -0.84
RNF4-216ENST00000511859 BRICD5Q6PL45 260 aa9.83□□□□□ -0.84
RNF4-216ENST00000511859 SPATC1Q76KD6 591 aa9.83□□□□□ -0.84
RNF4-216ENST00000511859 MAVSQ7Z434 540 aa9.83□□□□□ -0.84
RNF4-216ENST00000511859 LRRC34Q8IZ02 419 aa9.83□□□□□ -0.84
RNF4-216ENST00000511859 KIR3DL3Q8N743 410 aa9.83□□□□□ -0.84
RNF4-216ENST00000511859 PIK3C3Q8NEB9 887 aa9.83□□□□□ -0.84
RNF4-216ENST00000511859 DEFB108BQ8NET1 73 aa9.83□□□□□ -0.84
RNF4-216ENST00000511859 OR4F5Q8NH21 305 aa9.83□□□□□ -0.84
RNF4-216ENST00000511859 PPP3R2Q96LZ3 170 aa9.83□□□□□ -0.84
RNF4-216ENST00000511859 C7orf26Q96N11 449 aa9.83□□□□□ -0.84
RNF4-216ENST00000511859 RBM4BQ9BQ04 359 aaKnown RBP9.83□□□□□ -0.84
RNF4-216ENST00000511859 DUSP26Q9BV47 211 aa9.83□□□□□ -0.84
RNF4-216ENST00000511859 MS4A7Q9GZW8 240 aaPredicted RBP9.83□□□□□ -0.84
RNF4-216ENST00000511859 FGFR1OP2Q9NVK5 253 aa9.83□□□□□ -0.84
RNF4-216ENST00000511859 SLCO1C1Q9NYB5 712 aa9.83□□□□□ -0.84
RNF4-216ENST00000511859 HAO1Q9UJM8 370 aa9.83□□□□□ -0.84
RNF4-216ENST00000511859 PURGQ9UJV8 347 aaKnown RBP9.83□□□□□ -0.84
RNF4-216ENST00000511859 FBXL3Q9UKT7 428 aa9.83□□□□□ -0.84
RNF4-216ENST00000511859 A0A096LPI6 279 aa9.82□□□□□ -0.84
RNF4-216ENST00000511859 AGAP5A6NIR3 686 aa9.82□□□□□ -0.84
RNF4-216ENST00000511859 EDF1O60869 148 aaKnown RBP9.82□□□□□ -0.84
RNF4-216ENST00000511859 CRYBA1P05813 215 aa9.82□□□□□ -0.84
RNF4-216ENST00000511859 PRPS1L1P21108 318 aa9.82□□□□□ -0.84
RNF4-216ENST00000511859 EPHA3P29320 983 aa9.82□□□□□ -0.84
RNF4-216ENST00000511859 RAB1AP62820 205 aa9.82□□□□□ -0.84
RNF4-216ENST00000511859 GNGT1P63211 74 aa9.82□□□□□ -0.84
RNF4-216ENST00000511859 PIGFQ07326 219 aa9.82□□□□□ -0.84
RNF4-216ENST00000511859 GNA13Q14344 377 aa9.82□□□□□ -0.84
RNF4-216ENST00000511859 PTGR1Q14914 329 aa9.82□□□□□ -0.84
RNF4-216ENST00000511859 MOGQ16653 247 aa9.82□□□□□ -0.84
RNF4-216ENST00000511859 ALKBH6Q3KRA9 238 aa9.82□□□□□ -0.84
RNF4-216ENST00000511859 KLF17Q5JT82 389 aaPredicted RBP9.82□□□□□ -0.84
RNF4-216ENST00000511859 FAM209AQ5JX71 171 aa9.82□□□□□ -0.84
RNF4-216ENST00000511859 C1orf140Q5VVS0 124 aa9.82□□□□□ -0.84
RNF4-216ENST00000511859 OLFML2AQ68BL7 652 aa9.82□□□□□ -0.84
RNF4-216ENST00000511859 NXNQ6DKJ4 435 aa9.82□□□□□ -0.84
RNF4-216ENST00000511859 USP51Q70EK9 711 aa9.82□□□□□ -0.84
RNF4-216ENST00000511859 RHOUQ7L0Q8 258 aa9.82□□□□□ -0.84
RNF4-216ENST00000511859 ZNF627Q7L945 461 aa9.82□□□□□ -0.84
RNF4-216ENST00000511859 KDM8Q8N371 416 aa9.82□□□□□ -0.84
RNF4-216ENST00000511859 MFSD8Q8NHS3 518 aa9.82□□□□□ -0.84
RNF4-216ENST00000511859 TUBGCP3Q96CW5 907 aa9.82□□□□□ -0.84
RNF4-216ENST00000511859 OXGR1Q96P68 337 aa9.82□□□□□ -0.84
RNF4-216ENST00000511859 C1orf50Q9BV19 199 aa9.82□□□□□ -0.84
RNF4-216ENST00000511859 RABEP2Q9H5N1 569 aa9.82□□□□□ -0.84
RNF4-216ENST00000511859 WDR55Q9H6Y2 383 aaPredicted RBP9.82□□□□□ -0.84
RNF4-216ENST00000511859 NPHS2Q9NP85 383 aa9.82□□□□□ -0.84
RNF4-216ENST00000511859 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.82□□□□□ -0.84
RNF4-216ENST00000511859 LEF1Q9UJU2 399 aaPredicted RBP9.82□□□□□ -0.84
RNF4-216ENST00000511859 POLR3KQ9Y2Y1 108 aaPredicted RBP9.82□□□□□ -0.84
RNF4-216ENST00000511859 USH1CQ9Y6N9 552 aa9.82□□□□□ -0.84
RNF4-216ENST00000511859 RYR3Q15413 4870 aa9.82□□□□□ -0.84
RNF4-216ENST00000511859 IGLV3-9A0A075B6K5 115 aa9.81□□□□□ -0.84
RNF4-216ENST00000511859 RNF103-CHMP3A0A140T963 221 aa9.81□□□□□ -0.84
RNF4-216ENST00000511859 SDHDO14521 159 aa9.81□□□□□ -0.84
RNF4-216ENST00000511859 HDAC3O15379 428 aa9.81□□□□□ -0.84
RNF4-216ENST00000511859 TPD52L2O43399 206 aaKnown RBP9.81□□□□□ -0.84
RNF4-216ENST00000511859 FRS3O43559 492 aa9.81□□□□□ -0.84
RNF4-216ENST00000511859 NPIPB7O75200 414 aa9.81□□□□□ -0.84
RNF4-216ENST00000511859 RAB36O95755 333 aa9.81□□□□□ -0.84
RNF4-216ENST00000511859 MT-ND5P03915 603 aa9.81□□□□□ -0.84
RNF4-216ENST00000511859 ZNF250P15622 560 aa9.81□□□□□ -0.84
RNF4-216ENST00000511859 IL7RP16871 459 aa9.81□□□□□ -0.84
RNF4-216ENST00000511859 PTDSS1P48651 473 aaKnown RBP9.81□□□□□ -0.84
RNF4-216ENST00000511859 KLF3P57682 345 aaPredicted RBP9.81□□□□□ -0.84
RNF4-216ENST00000511859 HPCAP84074 193 aa9.81□□□□□ -0.84
RNF4-216ENST00000511859 SLC3A1Q07837 685 aa9.81□□□□□ -0.84
RNF4-216ENST00000511859 GPAT3Q53EU6 434 aa9.81□□□□□ -0.84
RNF4-216ENST00000511859 XKR7Q5GH72 579 aa9.81□□□□□ -0.84
RNF4-216ENST00000511859 ASPHD2Q6ICH7 369 aa9.81□□□□□ -0.84
RNF4-216ENST00000511859 C9orf139Q6ZV77 190 aa9.81□□□□□ -0.84
RNF4-216ENST00000511859 C1QL4Q86Z23 238 aa9.81□□□□□ -0.84
RNF4-216ENST00000511859 RIMKLAQ8IXN7 391 aa9.81□□□□□ -0.84
RNF4-216ENST00000511859 ZNF440Q8IYI8 595 aa9.81□□□□□ -0.84
RNF4-216ENST00000511859 CLEC4FQ8N1N0 589 aa9.81□□□□□ -0.84
RNF4-216ENST00000511859 KRTCAP2Q8N6L1 136 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms