RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 HS3ST1O14792 307 aa11.84□□□□□ -0.51
SNF8-206ENST00000509989 UBOX5O94941 541 aa11.84□□□□□ -0.51
SNF8-206ENST00000509989 OR6A2O95222 327 aa11.84□□□□□ -0.51
SNF8-206ENST00000509989 CD3EP07766 207 aa11.84□□□□□ -0.51
SNF8-206ENST00000509989 SOD3P08294 240 aa11.84□□□□□ -0.51
SNF8-206ENST00000509989 THRBP10828 461 aa11.84□□□□□ -0.51
SNF8-206ENST00000509989 CD40P25942 277 aa11.84□□□□□ -0.51
SNF8-206ENST00000509989 PRKCDQ05655 676 aa11.84□□□□□ -0.51
SNF8-206ENST00000509989 DBPQ10586 325 aaPredicted RBP11.84□□□□□ -0.51
SNF8-206ENST00000509989 TRAM2Q15035 370 aa11.84□□□□□ -0.51
SNF8-206ENST00000509989 PGGHGQ32M88 737 aa11.84□□□□□ -0.51
SNF8-206ENST00000509989 SAMD4BQ5PRF9 694 aaKnown RBP11.84□□□□□ -0.51
SNF8-206ENST00000509989 OR7E24Q6IFN5 339 aa11.84□□□□□ -0.51
SNF8-206ENST00000509989 HMBOX1Q6NT76 420 aa11.84□□□□□ -0.51
SNF8-206ENST00000509989 PODNL1Q6PEZ8 512 aa11.84□□□□□ -0.51
SNF8-206ENST00000509989 C16orf89Q6UX73 402 aa11.84□□□□□ -0.51
SNF8-206ENST00000509989 GPR137CQ8N3F9 429 aa11.84□□□□□ -0.51
SNF8-206ENST00000509989 WFDC11Q8NEX6 87 aa11.84□□□□□ -0.51
SNF8-206ENST00000509989 OR13C2Q8NGS9 318 aa11.84□□□□□ -0.51
SNF8-206ENST00000509989 OR52J3Q8NH60 311 aa11.84□□□□□ -0.51
SNF8-206ENST00000509989 OR51A7Q8NH64 312 aa11.84□□□□□ -0.51
SNF8-206ENST00000509989 SLC7A13Q8TCU3 470 aa11.84□□□□□ -0.51
SNF8-206ENST00000509989 NINJ1Q92982 152 aa11.84□□□□□ -0.51
SNF8-206ENST00000509989 TMEM54Q969K7 222 aa11.84□□□□□ -0.51
SNF8-206ENST00000509989 BPIFA2Q96DR5 249 aa11.84□□□□□ -0.51
SNF8-206ENST00000509989 ZNF347Q96SE7 839 aa11.84□□□□□ -0.51
SNF8-206ENST00000509989 GPA33Q99795 319 aa11.84□□□□□ -0.51
SNF8-206ENST00000509989 FUZQ9BT04 418 aa11.84□□□□□ -0.51
SNF8-206ENST00000509989 POLR2J2Q9GZM3 115 aaKnown RBP11.84□□□□□ -0.51
SNF8-206ENST00000509989 POLR2J3Q9H1A7 115 aaKnown RBP11.84□□□□□ -0.51
SNF8-206ENST00000509989 CXXC4Q9H2H0 198 aa11.84□□□□□ -0.51
SNF8-206ENST00000509989 NMNAT1Q9HAN9 279 aaPredicted RBP11.84□□□□□ -0.51
SNF8-206ENST00000509989 TAS2R1Q9NYW7 299 aa11.84□□□□□ -0.51
SNF8-206ENST00000509989 ZNF224Q9NZL3 707 aa11.84□□□□□ -0.51
SNF8-206ENST00000509989 FLNAP21333 2647 aaKnown RBP11.84□□□□□ -0.51
SNF8-206ENST00000509989 IGHV1-18A0A0C4DH31 117 aa11.83□□□□□ -0.52
SNF8-206ENST00000509989 TCRBV5S2A0A599 114 aa11.83□□□□□ -0.52
SNF8-206ENST00000509989 NDUFAB1O14561 156 aa11.83□□□□□ -0.52
SNF8-206ENST00000509989 DANCRP0C864 163 aa11.83□□□□□ -0.52
SNF8-206ENST00000509989 PATE4P0C8F1 98 aa11.83□□□□□ -0.52
SNF8-206ENST00000509989 NR1H2P55055 460 aa11.83□□□□□ -0.52
SNF8-206ENST00000509989 ZNF672Q499Z4 452 aaPredicted RBP11.83□□□□□ -0.52
SNF8-206ENST00000509989 KLHL24Q6TFL4 600 aa11.83□□□□□ -0.52
SNF8-206ENST00000509989 P2RY8Q86VZ1 359 aa11.83□□□□□ -0.52
SNF8-206ENST00000509989 PIAS4Q8N2W9 510 aaPredicted RBP11.83□□□□□ -0.52
SNF8-206ENST00000509989 C1orf162Q8NEQ5 155 aaPredicted RBP11.83□□□□□ -0.52
SNF8-206ENST00000509989 ANKK1Q8NFD2 765 aa11.83□□□□□ -0.52
SNF8-206ENST00000509989 LIPHQ8WWY8 451 aa11.83□□□□□ -0.52
SNF8-206ENST00000509989 ASB10Q8WXI3 467 aa11.83□□□□□ -0.52
SNF8-206ENST00000509989 ACOT11Q8WXI4 607 aaPredicted RBP11.83□□□□□ -0.52
SNF8-206ENST00000509989 MBD6Q96DN6 1003 aa11.83□□□□□ -0.52
SNF8-206ENST00000509989 PYURFQ96I23 114 aa11.83□□□□□ -0.52
SNF8-206ENST00000509989 BOD1Q96IK1 185 aa11.83□□□□□ -0.52
SNF8-206ENST00000509989 FAM46AQ96IP4 442 aaKnown RBP11.83□□□□□ -0.52
SNF8-206ENST00000509989 NSMCE2Q96MF7 247 aa11.83□□□□□ -0.52
SNF8-206ENST00000509989 HS6ST2Q96MM7 605 aa11.83□□□□□ -0.52
SNF8-206ENST00000509989 FOXC2Q99958 501 aa11.83□□□□□ -0.52
SNF8-206ENST00000509989 ESRP2Q9H6T0 727 aaKnown RBP11.83□□□□□ -0.52
SNF8-206ENST00000509989 MAGEL2Q9UJ55 1249 aa11.83□□□□□ -0.52
SNF8-206ENST00000509989 RPS6KA6Q9UK32 745 aa11.83□□□□□ -0.52
SNF8-206ENST00000509989 CHD3Q12873 2000 aaKnown RBP11.82□□□□□ -0.52
SNF8-206ENST00000509989 ZNF726A6NNF4 738 aa11.82□□□□□ -0.52
SNF8-206ENST00000509989 ATP6V1G2-DDX39BF2Z307 99 aa11.82□□□□□ -0.52
SNF8-206ENST00000509989 IMPA2O14732 288 aa11.82□□□□□ -0.52
SNF8-206ENST00000509989 NDUFS7O75251 213 aa11.82□□□□□ -0.52
SNF8-206ENST00000509989 CD8AP01732 235 aa11.82□□□□□ -0.52
SNF8-206ENST00000509989 HLA-HP01893 362 aa11.82□□□□□ -0.52
SNF8-206ENST00000509989 HIST1H2ABP04908 130 aa11.82□□□□□ -0.52
SNF8-206ENST00000509989 PGA4P0DJD7 388 aa11.82□□□□□ -0.52
SNF8-206ENST00000509989 PGA3P0DJD8 388 aa11.82□□□□□ -0.52
SNF8-206ENST00000509989 B4GALT1P15291 398 aa11.82□□□□□ -0.52
SNF8-206ENST00000509989 CALCRP30988 508 aa11.82□□□□□ -0.52
SNF8-206ENST00000509989 CSNK1A1P48729 337 aa11.82□□□□□ -0.52
SNF8-206ENST00000509989 FXYD6P3P58550 94 aa11.82□□□□□ -0.52
SNF8-206ENST00000509989 PRPS1P60891 318 aa11.82□□□□□ -0.52
SNF8-206ENST00000509989 RPS4XP62701 263 aaKnown RBP11.82□□□□□ -0.52
SNF8-206ENST00000509989 ADAM8P78325 824 aa11.82□□□□□ -0.52
SNF8-206ENST00000509989 FMODQ06828 376 aa11.82□□□□□ -0.52
SNF8-206ENST00000509989 PPP1R8Q12972 351 aaKnown RBP11.82□□□□□ -0.52
SNF8-206ENST00000509989 TOP3AQ13472 1001 aaPredicted RBP11.82□□□□□ -0.52
SNF8-206ENST00000509989 ARMC4Q5T2S8 1044 aa11.82□□□□□ -0.52
SNF8-206ENST00000509989 ANKRD16Q6P6B7 361 aa11.82□□□□□ -0.52
SNF8-206ENST00000509989 ZNF730Q6ZMV8 503 aa11.82□□□□□ -0.52
SNF8-206ENST00000509989 HIST3H2AQ7L7L0 130 aa11.82□□□□□ -0.52
SNF8-206ENST00000509989 ZNF611Q8N823 705 aa11.82□□□□□ -0.52
SNF8-206ENST00000509989 SYT14Q8NB59 555 aa11.82□□□□□ -0.52
SNF8-206ENST00000509989 OR6N1Q8NGY5 312 aa11.82□□□□□ -0.52
SNF8-206ENST00000509989 OR6X1Q8NH79 312 aa11.82□□□□□ -0.52
SNF8-206ENST00000509989 HDAC2Q92769 488 aaKnown RBP11.82□□□□□ -0.52
SNF8-206ENST00000509989 HIST1H2ACQ93077 130 aa11.82□□□□□ -0.52
SNF8-206ENST00000509989 GTPBP3Q969Y2 492 aaKnown RBP11.82□□□□□ -0.52
SNF8-206ENST00000509989 SLC7A6OSQ96CW6 309 aaPredicted RBP11.82□□□□□ -0.52
SNF8-206ENST00000509989 DHRS1Q96LJ7 313 aa11.82□□□□□ -0.52
SNF8-206ENST00000509989 TSPAN32Q96QS1 320 aa11.82□□□□□ -0.52
SNF8-206ENST00000509989 CCL19Q99731 98 aa11.82□□□□□ -0.52
SNF8-206ENST00000509989 INIPQ9NRY2 104 aa11.82□□□□□ -0.52
SNF8-206ENST00000509989 GLTPQ9NZD2 209 aa11.82□□□□□ -0.52
SNF8-206ENST00000509989 SAMD4AQ9UPU9 718 aaKnown RBP11.82□□□□□ -0.52
SNF8-206ENST00000509989 LAMP3Q9UQV4 416 aa11.82□□□□□ -0.52
SNF8-206ENST00000509989 AMDHD2Q9Y303 409 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms