RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 ARRDC5A6NEK1 342 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 OR5H1A6NKK0 313 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 A6NNC1 897 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 RPL36A-HNRNPH2H7BZ11 118 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 XKRYO14609 159 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 MGRN1O60291 552 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 PIP5K1CO60331 668 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 E2F6O75461 281 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 LYZL6O75951 148 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 ZNF432O94892 652 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 NDUFB2O95178 105 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 WNT11O96014 354 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 HPRP00739 348 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 IGHV3-9P01782 118 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 MAKP20794 623 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 GSTM3P21266 225 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 IGHV1-2P23083 117 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 FPR3P25089 353 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 AQP2P41181 271 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 OMPP47874 163 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 BIDP55957 195 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 CLRN1P58418 232 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 ROR2Q01974 943 aaKnown RBP8.06□□□□□ -1.12
NUP54-207ENST00000508583 GABPB1Q06547 395 aaPredicted RBP8.06□□□□□ -1.12
NUP54-207ENST00000508583 DAZAP2Q15038 168 aaPredicted RBP8.06□□□□□ -1.12
NUP54-207ENST00000508583 ZNF787Q6DD87 383 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 GPR139Q6DWJ6 353 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 TBPL2Q6SJ96 375 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 KLHL17Q6TDP4 642 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 C20orf196Q8IYI0 205 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 TMEM123Q8N131 208 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 LRRC17Q8N6Y2 441 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 ZNF433Q8N7K0 673 aaPredicted RBP8.06□□□□□ -1.12
NUP54-207ENST00000508583 OR52L1Q8NGH7 329 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 OR13C2Q8NGS9 318 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 OR51A7Q8NH64 312 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 LINC01560Q8TB33 94 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 GNPDA2Q8TDQ7 276 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 NANOS1Q8WY41 292 aaKnown RBP8.06□□□□□ -1.12
NUP54-207ENST00000508583 S100PBPQ96BU1 408 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 ALKBH3Q96Q83 286 aaPredicted RBP8.06□□□□□ -1.12
NUP54-207ENST00000508583 POLDIP3Q9BY77 421 aaKnown RBP8.06□□□□□ -1.12
NUP54-207ENST00000508583 ULBP2Q9BZM5 246 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 TXNIPQ9H3M7 391 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 ZNF556Q9HAH1 456 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 CCM2LQ9NUG4 571 aaPredicted RBP8.06□□□□□ -1.12
NUP54-207ENST00000508583 AMDHD2Q9Y303 409 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 LYVE1Q9Y5Y7 322 aa8.06□□□□□ -1.12
NUP54-207ENST00000508583 CRYBG3Q68DQ2 2970 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 CENPEQ02224 2701 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 TRAV27A0A087WT01 109 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 UNC119BA6NIH7 251 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 ZNF99A8MXY4 864 aaPredicted RBP8.05□□□□□ -1.12
NUP54-207ENST00000508583 PDLIM1O00151 329 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 AHCYL1O43865 530 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 FKBP6O75344 327 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 RAD51DO75771 328 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 IGHMP01871 453 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 F13BP05160 661 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 CD14P08571 375 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 HLA-DOBP13765 273 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 APEHP13798 732 aaKnown RBP8.05□□□□□ -1.12
NUP54-207ENST00000508583 CRYGSP22914 178 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 SLC6A6P31641 620 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 CCKARP32238 428 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 GUCA1AP43080 201 aaPredicted RBP8.05□□□□□ -1.12
NUP54-207ENST00000508583 LIMS1P48059 325 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 ZNF84P51523 738 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 RPS6KA3P51812 740 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 CTXN1P60606 82 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 UBE2NP61088 152 aaKnown RBP8.05□□□□□ -1.12
NUP54-207ENST00000508583 RPL27P61353 136 aaKnown RBP8.05□□□□□ -1.12
NUP54-207ENST00000508583 TLE4Q04727 773 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 TSPAN31Q12999 210 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 CAMK2DQ13557 499 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 PPA1Q15181 289 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 SEC23BQ15437 767 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 ACKR1Q16570 336 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 MICAQ29983 383 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 BEX5Q5H9J7 111 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 C1orf94Q6P1W5 598 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 ZFP1Q6P2D0 407 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 ANKRD16Q6P6B7 361 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 SMARCD3Q6STE5 483 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.05□□□□□ -1.12
NUP54-207ENST00000508583 DPPA2Q7Z7J5 298 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 ADCK1Q86TW2 530 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 TMEM200AQ86VY9 491 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 PAPD5Q8NDF8 572 aaKnown RBP8.05□□□□□ -1.12
NUP54-207ENST00000508583 FANK1Q8TC84 345 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 MAGEE2Q8TD90 523 aaPredicted RBP8.05□□□□□ -1.12
NUP54-207ENST00000508583 DNAJC9Q8WXX5 260 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 NRBF2Q96F24 287 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 BOD1Q96IK1 185 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 MUS81Q96NY9 551 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 WFIKKN1Q96NZ8 548 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 GPX7Q96SL4 187 aaPredicted RBP8.05□□□□□ -1.12
NUP54-207ENST00000508583 FUZQ9BT04 418 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 BDH2Q9BUT1 245 aa8.05□□□□□ -1.12
NUP54-207ENST00000508583 ALG12Q9BV10 488 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms