RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 TRAF3IP2O43734 574 aaPredicted RBP8□□□□□ -1.13
NEDD9-211ENST00000508546 TYROBPO43914 113 aa8□□□□□ -1.13
NEDD9-211ENST00000508546 SEC14L2O76054 403 aa8□□□□□ -1.13
NEDD9-211ENST00000508546 PPIAL4FP0DN26 164 aa8□□□□□ -1.13
NEDD9-211ENST00000508546 CD79AP11912 226 aa8□□□□□ -1.13
NEDD9-211ENST00000508546 GTF2E2P29084 291 aaKnown RBP8□□□□□ -1.13
NEDD9-211ENST00000508546 LSP1P33241 339 aa8□□□□□ -1.13
NEDD9-211ENST00000508546 SERPINB5P36952 375 aa8□□□□□ -1.13
NEDD9-211ENST00000508546 MAGEB1P43366 347 aa8□□□□□ -1.13
NEDD9-211ENST00000508546 MVKQ03426 396 aa8□□□□□ -1.13
NEDD9-211ENST00000508546 EGR4Q05215 589 aa8□□□□□ -1.13
NEDD9-211ENST00000508546 DPY19L1Q2PZI1 675 aa8□□□□□ -1.13
NEDD9-211ENST00000508546 PCGF3Q3KNV8 242 aa8□□□□□ -1.13
NEDD9-211ENST00000508546 GLIPR1L2Q4G1C9 344 aa8□□□□□ -1.13
NEDD9-211ENST00000508546 PHYHD1Q5SRE7 291 aa8□□□□□ -1.13
NEDD9-211ENST00000508546 AVPI1Q5T686 147 aa8□□□□□ -1.13
NEDD9-211ENST00000508546 GKAP1Q5VSY0 366 aaPredicted RBP8□□□□□ -1.13
NEDD9-211ENST00000508546 ZNF813Q6ZN06 617 aa8□□□□□ -1.13
NEDD9-211ENST00000508546 RNF130Q86XS8 419 aa8□□□□□ -1.13
NEDD9-211ENST00000508546 TREML1Q86YW5 311 aa8□□□□□ -1.13
NEDD9-211ENST00000508546 C20orf196Q8IYI0 205 aa8□□□□□ -1.13
NEDD9-211ENST00000508546 SIGLECL1Q8N7X8 197 aa8□□□□□ -1.13
NEDD9-211ENST00000508546 DYDC1Q8WWB3 177 aa8□□□□□ -1.13
NEDD9-211ENST00000508546 C22orf15Q8WYQ4 148 aa8□□□□□ -1.13
NEDD9-211ENST00000508546 POP5Q969H6 163 aaKnown RBP8□□□□□ -1.13
NEDD9-211ENST00000508546 SLC25A36Q96CQ1 311 aa8□□□□□ -1.13
NEDD9-211ENST00000508546 C1orf147Q96MC9 270 aaPredicted RBP8□□□□□ -1.13
NEDD9-211ENST00000508546 GPA33Q99795 319 aa8□□□□□ -1.13
NEDD9-211ENST00000508546 HINT3Q9NQE9 182 aaKnown RBP8□□□□□ -1.13
NEDD9-211ENST00000508546 ZNF224Q9NZL3 707 aa8□□□□□ -1.13
NEDD9-211ENST00000508546 FZR1Q9UM11 496 aa8□□□□□ -1.13
NEDD9-211ENST00000508546 WIPI2Q9Y4P8 454 aa8□□□□□ -1.13
NEDD9-211ENST00000508546 IGHV1-69-2A0A0G2JMI3 117 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 SLC22A23A1A5C7 686 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 CLDN25C9JDP6 229 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 CLDN34H7C241 214 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 M0R3G1 203 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 AIM2O14862 343 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 OR2T1O43869 369 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 CDC14BO60729 498 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 RAB36O95755 333 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 C1QCP02747 245 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 RNASE1P07998 156 aaKnown RBP7.99□□□□□ -1.13
NEDD9-211ENST00000508546 NR2F1P10589 423 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 ZNF250P15622 560 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 GCH1P30793 250 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 ARRB2P32121 409 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 RAD52P43351 418 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 RPS5P46782 204 aaKnown RBP7.99□□□□□ -1.13
NEDD9-211ENST00000508546 GIPRP48546 466 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 PTDSS1P48651 473 aaKnown RBP7.99□□□□□ -1.13
NEDD9-211ENST00000508546 SELENOVP59797 346 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 RAB1AP62820 205 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 CCL8P80075 99 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 PIGFQ07326 219 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 C1DQ13901 141 aaKnown RBP7.99□□□□□ -1.13
NEDD9-211ENST00000508546 MPP2Q14168 576 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 MFSD13AQ14CX5 517 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 NKPD1Q17RQ9 610 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 LIN52Q52LA3 116 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 FAM69AQ5T7M9 428 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 RNF220Q5VTB9 566 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 RGS7BPQ6MZT1 257 aaPredicted RBP7.99□□□□□ -1.13
NEDD9-211ENST00000508546 TMEM154Q6P9G4 183 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 C5orf46Q6UWT4 87 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 ZNF836Q6ZNA1 936 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 RETREG3Q86VR2 466 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 SNX32Q86XE0 403 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 VRK2Q86Y07 508 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 TRIML2Q8N7C3 387 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 OR52P1PQ8NH57 321 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 TIMD4Q96H15 378 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 CCDC115Q96NT0 180 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 MECRQ9BV79 373 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 CCDC134Q9H6E4 229 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.99□□□□□ -1.13
NEDD9-211ENST00000508546 PLEK2Q9NYT0 353 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 TAAR3PQ9P1P4 343 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 SEC14L4Q9UDX3 406 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 BTNL2Q9UIR0 455 aa7.99□□□□□ -1.13
NEDD9-211ENST00000508546 CCDC154A6NI56 674 aa7.98□□□□□ -1.13
NEDD9-211ENST00000508546 M0R082 166 aa7.98□□□□□ -1.13
NEDD9-211ENST00000508546 UBL3O95164 117 aa7.98□□□□□ -1.13
NEDD9-211ENST00000508546 SERPINA5P05154 406 aa7.98□□□□□ -1.13
NEDD9-211ENST00000508546 VSIG8P0DPA2 414 aa7.98□□□□□ -1.13
NEDD9-211ENST00000508546 PRG2P13727 222 aa7.98□□□□□ -1.13
NEDD9-211ENST00000508546 NCF2P19878 526 aaPredicted RBP7.98□□□□□ -1.13
NEDD9-211ENST00000508546 CLNS1AP54105 237 aaKnown RBP7.98□□□□□ -1.13
NEDD9-211ENST00000508546 KLF3P57682 345 aaPredicted RBP7.98□□□□□ -1.13
NEDD9-211ENST00000508546 LARS2Q15031 903 aaKnown RBP7.98□□□□□ -1.13
NEDD9-211ENST00000508546 MAPK11Q15759 364 aa7.98□□□□□ -1.13
NEDD9-211ENST00000508546 CHI3L2Q15782 390 aa7.98□□□□□ -1.13
NEDD9-211ENST00000508546 ALKBH6Q3KRA9 238 aa7.98□□□□□ -1.13
NEDD9-211ENST00000508546 SPANXN4Q5MJ08 99 aa7.98□□□□□ -1.13
NEDD9-211ENST00000508546 HHATQ5VTY9 493 aa7.98□□□□□ -1.13
NEDD9-211ENST00000508546 ATG16L1Q676U5 607 aa7.98□□□□□ -1.13
NEDD9-211ENST00000508546 C6orf89Q6UWU4 347 aa7.98□□□□□ -1.13
NEDD9-211ENST00000508546 H1FNTQ75WM6 255 aaPredicted RBP7.98□□□□□ -1.13
NEDD9-211ENST00000508546 NET1Q7Z628 596 aaPredicted RBP7.98□□□□□ -1.13
NEDD9-211ENST00000508546 C1QL4Q86Z23 238 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms