RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 WDR88Q6ZMY6 472 aa11.25□□□□□ -0.61
HMGCS1-205ENST00000508319 ZNF627Q7L945 461 aa11.25□□□□□ -0.61
HMGCS1-205ENST00000508319 PXKQ7Z7A4 578 aa11.25□□□□□ -0.61
HMGCS1-205ENST00000508319 TSPYL5Q86VY4 417 aaPredicted RBP11.25□□□□□ -0.61
HMGCS1-205ENST00000508319 SVOPLQ8N434 492 aa11.25□□□□□ -0.61
HMGCS1-205ENST00000508319 OR6T1Q8NGN1 323 aa11.25□□□□□ -0.61
HMGCS1-205ENST00000508319 CKAP2Q8WWK9 683 aa11.25□□□□□ -0.61
HMGCS1-205ENST00000508319 THOC1Q96FV9 657 aaKnown RBP11.25□□□□□ -0.61
HMGCS1-205ENST00000508319 MAGEB18Q96M61 343 aa11.25□□□□□ -0.61
HMGCS1-205ENST00000508319 ZNF75AQ96N20 296 aa11.25□□□□□ -0.61
HMGCS1-205ENST00000508319 FOXN4Q96NZ1 517 aa11.25□□□□□ -0.61
HMGCS1-205ENST00000508319 BPESC1Q9GZL8 116 aa11.25□□□□□ -0.61
HMGCS1-205ENST00000508319 KAT8Q9H7Z6 458 aaKnown RBP11.25□□□□□ -0.61
HMGCS1-205ENST00000508319 B3GNT2Q9NY97 397 aa11.25□□□□□ -0.61
HMGCS1-205ENST00000508319 ZNF224Q9NZL3 707 aa11.25□□□□□ -0.61
HMGCS1-205ENST00000508319 NDUFAF1Q9Y375 327 aa11.25□□□□□ -0.61
HMGCS1-205ENST00000508319 TMEM129A0AVI4 362 aa11.24□□□□□ -0.61
HMGCS1-205ENST00000508319 RNF212BA8MTL3 300 aa11.24□□□□□ -0.61
HMGCS1-205ENST00000508319 M0QX08 132 aa11.24□□□□□ -0.61
HMGCS1-205ENST00000508319 ANGPT2O15123 496 aa11.24□□□□□ -0.61
HMGCS1-205ENST00000508319 MT-ATP6P00846 226 aa11.24□□□□□ -0.61
HMGCS1-205ENST00000508319 IGFBP1P08833 259 aaPredicted RBP11.24□□□□□ -0.61
HMGCS1-205ENST00000508319 CD247P20963 164 aa11.24□□□□□ -0.61
HMGCS1-205ENST00000508319 RBBP4Q09028 425 aa11.24□□□□□ -0.61
HMGCS1-205ENST00000508319 SNTB2Q13425 540 aaKnown RBP11.24□□□□□ -0.61
HMGCS1-205ENST00000508319 DAG1Q14118 895 aa11.24□□□□□ -0.61
HMGCS1-205ENST00000508319 CARTPTQ16568 116 aa11.24□□□□□ -0.61
HMGCS1-205ENST00000508319 KRT80Q6KB66 452 aa11.24□□□□□ -0.61
HMGCS1-205ENST00000508319 ZNF813Q6ZN06 617 aa11.24□□□□□ -0.61
HMGCS1-205ENST00000508319 RBM45Q8IUH3 476 aaKnown RBP11.24□□□□□ -0.61
HMGCS1-205ENST00000508319 PHC2Q8IXK0 858 aa11.24□□□□□ -0.61
HMGCS1-205ENST00000508319 ZCCHC24Q8N2G6 241 aaKnown RBP11.24□□□□□ -0.61
HMGCS1-205ENST00000508319 C10orf53Q8N6V4 93 aa11.24□□□□□ -0.61
HMGCS1-205ENST00000508319 OR4D11Q8NGI4 311 aa11.24□□□□□ -0.61
HMGCS1-205ENST00000508319 OR5J2Q8NH18 312 aa11.24□□□□□ -0.61
HMGCS1-205ENST00000508319 ADAMTS16Q8TE57 1224 aa11.24□□□□□ -0.61
HMGCS1-205ENST00000508319 MSI2Q96DH6 328 aaKnown RBP11.24□□□□□ -0.61
HMGCS1-205ENST00000508319 DOK1Q99704 481 aa11.24□□□□□ -0.61
HMGCS1-205ENST00000508319 B3GAT2Q9NPZ5 323 aa11.24□□□□□ -0.61
HMGCS1-205ENST00000508319 LPAR3Q9UBY5 353 aa11.24□□□□□ -0.61
HMGCS1-205ENST00000508319 FBXO9Q9UK97 447 aaPredicted RBP11.24□□□□□ -0.61
HMGCS1-205ENST00000508319 ANK2Q01484 3957 aa11.23□□□□□ -0.61
HMGCS1-205ENST00000508319 CPSF4LA6NMK7 179 aaKnown RBP11.23□□□□□ -0.61
HMGCS1-205ENST00000508319 HMGB1P1B2RPK0 211 aaPredicted RBP11.23□□□□□ -0.61
HMGCS1-205ENST00000508319 LMX1BO60663 402 aa11.23□□□□□ -0.61
HMGCS1-205ENST00000508319 SERPINI2O75830 405 aa11.23□□□□□ -0.61
HMGCS1-205ENST00000508319 C8BP07358 591 aa11.23□□□□□ -0.61
HMGCS1-205ENST00000508319 ADORA3P0DMS8 318 aa11.23□□□□□ -0.61
HMGCS1-205ENST00000508319 APEHP13798 732 aaKnown RBP11.23□□□□□ -0.61
HMGCS1-205ENST00000508319 IFNGR1P15260 489 aa11.23□□□□□ -0.61
HMGCS1-205ENST00000508319 ZNF14P17017 642 aaPredicted RBP11.23□□□□□ -0.61
HMGCS1-205ENST00000508319 NR4A1P22736 598 aa11.23□□□□□ -0.61
HMGCS1-205ENST00000508319 AHCYP23526 432 aa11.23□□□□□ -0.61
HMGCS1-205ENST00000508319 CRYBA2P53672 197 aa11.23□□□□□ -0.61
HMGCS1-205ENST00000508319 ZNF74Q16587 644 aa11.23□□□□□ -0.61
HMGCS1-205ENST00000508319 MSMPQ1L6U9 139 aa11.23□□□□□ -0.61
HMGCS1-205ENST00000508319 GSG1Q2KHT4 349 aa11.23□□□□□ -0.61
HMGCS1-205ENST00000508319 ENTPD8Q5MY95 495 aa11.23□□□□□ -0.61
HMGCS1-205ENST00000508319 SPATA21Q7Z572 469 aa11.23□□□□□ -0.61
HMGCS1-205ENST00000508319 CDK20Q8IZL9 346 aa11.23□□□□□ -0.61
HMGCS1-205ENST00000508319 ARIH2OSQ8N7S6 290 aa11.23□□□□□ -0.61
HMGCS1-205ENST00000508319 IL17RDQ8NFM7 739 aa11.23□□□□□ -0.61
HMGCS1-205ENST00000508319 OR6N1Q8NGY5 312 aa11.23□□□□□ -0.61
HMGCS1-205ENST00000508319 TSPEARQ8WU66 669 aa11.23□□□□□ -0.61
HMGCS1-205ENST00000508319 TAMM41Q96BW9 452 aa11.23□□□□□ -0.61
HMGCS1-205ENST00000508319 FOXB1Q99853 325 aa11.23□□□□□ -0.61
HMGCS1-205ENST00000508319 ZNF426Q9BUY5 554 aa11.23□□□□□ -0.61
HMGCS1-205ENST00000508319 BEX2Q9BXY8 128 aa11.23□□□□□ -0.61
HMGCS1-205ENST00000508319 ULBP2Q9BZM5 246 aa11.23□□□□□ -0.61
HMGCS1-205ENST00000508319 RAB1BQ9H0U4 201 aa11.23□□□□□ -0.61
HMGCS1-205ENST00000508319 PCDHAC1Q9H158 963 aa11.23□□□□□ -0.61
HMGCS1-205ENST00000508319 NPHS2Q9NP85 383 aa11.23□□□□□ -0.61
HMGCS1-205ENST00000508319 TRIM33Q9UPN9 1127 aa11.23□□□□□ -0.61
HMGCS1-205ENST00000508319 POFUT2Q9Y2G5 429 aa11.23□□□□□ -0.61
HMGCS1-205ENST00000508319 ZNF726A6NNF4 738 aa11.22□□□□□ -0.61
HMGCS1-205ENST00000508319 C11orf98E9PRG8 122 aa11.22□□□□□ -0.61
HMGCS1-205ENST00000508319 KPNA4O00629 521 aaPredicted RBP11.22□□□□□ -0.61
HMGCS1-205ENST00000508319 PHF1O43189 567 aaPredicted RBP11.22□□□□□ -0.61
HMGCS1-205ENST00000508319 EDF1O60869 148 aaKnown RBP11.22□□□□□ -0.61
HMGCS1-205ENST00000508319 STAMBPO95630 424 aa11.22□□□□□ -0.61
HMGCS1-205ENST00000508319 CD79AP11912 226 aa11.22□□□□□ -0.61
HMGCS1-205ENST00000508319 ZNF35P13682 527 aa11.22□□□□□ -0.61
HMGCS1-205ENST00000508319 ZNF23P17027 643 aa11.22□□□□□ -0.61
HMGCS1-205ENST00000508319 GIFP27352 417 aa11.22□□□□□ -0.61
HMGCS1-205ENST00000508319 PCGF2P35227 344 aa11.22□□□□□ -0.61
HMGCS1-205ENST00000508319 CSNK1A1P48729 337 aa11.22□□□□□ -0.61
HMGCS1-205ENST00000508319 GZMMP51124 257 aa11.22□□□□□ -0.61
HMGCS1-205ENST00000508319 BIDP55957 195 aa11.22□□□□□ -0.61
HMGCS1-205ENST00000508319 PIGFQ07326 219 aa11.22□□□□□ -0.61
HMGCS1-205ENST00000508319 NFYCQ13952 458 aa11.22□□□□□ -0.61
HMGCS1-205ENST00000508319 FAM166AQ6J272 317 aa11.22□□□□□ -0.61
HMGCS1-205ENST00000508319 PATL1Q86TB9 770 aaKnown RBP11.22□□□□□ -0.61
HMGCS1-205ENST00000508319 SLC30A8Q8IWU4 369 aa11.22□□□□□ -0.61
HMGCS1-205ENST00000508319 OR10A6Q8NH74 314 aa11.22□□□□□ -0.61
HMGCS1-205ENST00000508319 VANGL1Q8TAA9 524 aaPredicted RBP11.22□□□□□ -0.61
HMGCS1-205ENST00000508319 SIKE1Q9BRV8 207 aa11.22□□□□□ -0.61
HMGCS1-205ENST00000508319 SOX7Q9BT81 388 aa11.22□□□□□ -0.61
HMGCS1-205ENST00000508319 REPIN1Q9BWE0 567 aaKnown RBP11.22□□□□□ -0.61
HMGCS1-205ENST00000508319 SHARPINQ9H0F6 387 aa11.22□□□□□ -0.61
HMGCS1-205ENST00000508319 CHODLQ9H9P2 273 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms