RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 TSC22D1Q15714 1073 aa15.58■□□□□ 0.09
SQSTM1-211ENST00000506690 H3F3CQ6NXT2 135 aa15.58■□□□□ 0.09
SQSTM1-211ENST00000506690 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.58■□□□□ 0.09
SQSTM1-211ENST00000506690 OR6K6Q8NGW6 343 aa15.58■□□□□ 0.09
SQSTM1-211ENST00000506690 OR8S1Q8NH09 359 aa15.58■□□□□ 0.09
SQSTM1-211ENST00000506690 OR5AK2Q8NH90 309 aa15.58■□□□□ 0.09
SQSTM1-211ENST00000506690 FGF13Q92913 245 aa15.58■□□□□ 0.09
SQSTM1-211ENST00000506690 Q96M85 177 aa15.58■□□□□ 0.09
SQSTM1-211ENST00000506690 NMNAT3Q96T66 252 aa15.58■□□□□ 0.09
SQSTM1-211ENST00000506690 PDCD10Q9BUL8 212 aa15.58■□□□□ 0.09
SQSTM1-211ENST00000506690 EDARQ9UNE0 448 aa15.58■□□□□ 0.09
SQSTM1-211ENST00000506690 YBX2Q9Y2T7 364 aaKnown RBP15.58■□□□□ 0.09
SQSTM1-211ENST00000506690 NOSIPQ9Y314 301 aaKnown RBP15.58■□□□□ 0.09
SQSTM1-211ENST00000506690 ADAM18Q9Y3Q7 739 aa15.58■□□□□ 0.09
SQSTM1-211ENST00000506690 ENTPD2Q9Y5L3 495 aa15.58■□□□□ 0.09
SQSTM1-211ENST00000506690 EML5Q05BV3 1969 aa15.58■□□□□ 0.08
SQSTM1-211ENST00000506690 A0A1B0GWA3 101 aa15.58■□□□□ 0.08
SQSTM1-211ENST00000506690 SULT1C2O00338 296 aa15.58■□□□□ 0.08
SQSTM1-211ENST00000506690 UPK3AO75631 287 aa15.58■□□□□ 0.08
SQSTM1-211ENST00000506690 FGF18O76093 207 aa15.58■□□□□ 0.08
SQSTM1-211ENST00000506690 AKR7A3O95154 331 aa15.58■□□□□ 0.08
SQSTM1-211ENST00000506690 SNAPINO95295 136 aa15.58■□□□□ 0.08
SQSTM1-211ENST00000506690 PRSS3P35030 304 aa15.58■□□□□ 0.08
SQSTM1-211ENST00000506690 DLSTP36957 453 aa15.58■□□□□ 0.08
SQSTM1-211ENST00000506690 VASPP50552 380 aaPredicted RBP15.58■□□□□ 0.08
SQSTM1-211ENST00000506690 ERN2Q76MJ5 926 aaKnown RBP15.58■□□□□ 0.08
SQSTM1-211ENST00000506690 RXFP4Q8TDU9 374 aa15.58■□□□□ 0.08
SQSTM1-211ENST00000506690 CCDC74AQ96AQ1 378 aa15.58■□□□□ 0.08
SQSTM1-211ENST00000506690 SLC25A21Q9BQT8 299 aaPredicted RBP15.58■□□□□ 0.08
SQSTM1-211ENST00000506690 GPR174Q9BXC1 333 aa15.58■□□□□ 0.08
SQSTM1-211ENST00000506690 FRRS1LQ9P0K9 344 aa15.58■□□□□ 0.08
SQSTM1-211ENST00000506690 FBXL21Q9UKT6 434 aa15.58■□□□□ 0.08
SQSTM1-211ENST00000506690 TRAV18A0A075B6X5 111 aa15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 WNT11O96014 354 aa15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 PRNPP04156 253 aa15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 MAS1P04201 325 aa15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 CCL5P13501 91 aa15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 GRPRP30550 384 aa15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 CASRP41180 1078 aa15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 BTN3A2P78410 334 aa15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 ALKBH1Q13686 389 aaKnown RBP15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 TMEM71Q6P5X7 295 aa15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 FAM122BQ7Z309 247 aa15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 GABRG1Q8N1C3 465 aa15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 SLC39A11Q8N1S5 342 aa15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 OR4K14Q8NGD5 310 aa15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 OR1J4Q8NGS1 313 aa15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 ZPLD1Q8TCW7 415 aa15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 GPX8Q8TED1 209 aa15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 RBM18Q96H35 190 aaKnown RBP15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 SPHK1Q9NYA1 384 aa15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 COMMD9Q9P000 198 aa15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 SCN3AQ9NY46 2000 aa15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 OR6C76A6NM76 312 aa15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 SULT2B1O00204 365 aa15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 RPP14O95059 124 aaKnown RBP15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 LRG1P02750 347 aa15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 FABP1P07148 127 aa15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 CFPP27918 469 aa15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 CCR2P41597 374 aa15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 NPBWR1P48145 328 aa15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 GPR143P51810 404 aa15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 PSMD4P55036 377 aaKnown RBP15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 TAF13Q15543 124 aa15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 TRMT12Q53H54 448 aaKnown RBP15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 RAB12Q6IQ22 244 aa15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 SLC39A5Q6ZMH5 540 aa15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 OR2L8Q8NGY9 312 aa15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 NANPQ8TBE9 248 aa15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 INSM2Q96T92 566 aaPredicted RBP15.57■□□□□ 0.08
SQSTM1-211ENST00000506690 TRBV5-7A0A0A0MS05 114 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 FAM25EA8MYX2 175 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 SMIM6P0DI80 62 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 ADRB3P13945 408 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 SRSF3P84103 164 aaKnown RBP15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 DHRS2Q13268 280 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 LINC01590Q5TEZ4 76 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 ADAMTSL4Q6UY14 1074 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 TMED4Q7Z7H5 227 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 SKA3Q8IX90 412 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 OR51D1Q8NGF3 324 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 OR1J2Q8NGS2 313 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 PPP1R1CQ8WVI7 109 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 MYADMQ96S97 322 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 POTEKPQ9BYX7 375 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 MBD2Q9UBB5 411 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 C19orf53Q9UNZ5 99 aaPredicted RBP15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 A0A0C4DFX4 3053 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 NUP210LQ5VU65 1888 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 A0A1B0GVT2 93 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 PRICKLE3O43900 615 aaPredicted RBP15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 LDB3O75112 727 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 RDH16O75452 317 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 GLCEO94923 617 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 F12P00748 615 aaPredicted RBP15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 CXCL10P02778 98 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 TACSTD2P09758 323 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 OR8G3PP0DMU2 310 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 CD79AP11912 226 aa15.56■□□□□ 0.08
SQSTM1-211ENST00000506690 PNLIPRP2P54317 469 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms