RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 CGB2Q6NT52 195 aa12.46□□□□□ -0.41
CDC42SE2-209ENST00000506419 CCDC80Q76M96 950 aa12.46□□□□□ -0.41
CDC42SE2-209ENST00000506419 ZNF627Q7L945 461 aa12.46□□□□□ -0.41
CDC42SE2-209ENST00000506419 PATL1Q86TB9 770 aaKnown RBP12.46□□□□□ -0.41
CDC42SE2-209ENST00000506419 NUP37Q8NFH4 326 aa12.46□□□□□ -0.41
CDC42SE2-209ENST00000506419 OR5J2Q8NH18 312 aa12.46□□□□□ -0.41
CDC42SE2-209ENST00000506419 FGFBP3Q8TAT2 258 aa12.46□□□□□ -0.41
CDC42SE2-209ENST00000506419 MS4A3Q96HJ5 214 aa12.46□□□□□ -0.41
CDC42SE2-209ENST00000506419 FOXN4Q96NZ1 517 aa12.46□□□□□ -0.41
CDC42SE2-209ENST00000506419 VRK1Q99986 396 aaPredicted RBP12.46□□□□□ -0.41
CDC42SE2-209ENST00000506419 PRSS27Q9BQR3 290 aa12.46□□□□□ -0.41
CDC42SE2-209ENST00000506419 TMEM120AQ9BXJ8 343 aa12.46□□□□□ -0.41
CDC42SE2-209ENST00000506419 ZNF224Q9NZL3 707 aa12.46□□□□□ -0.41
CDC42SE2-209ENST00000506419 ZNF726A6NNF4 738 aa12.45□□□□□ -0.42
CDC42SE2-209ENST00000506419 C11orf98E9PRG8 122 aa12.45□□□□□ -0.42
CDC42SE2-209ENST00000506419 FXYD1O00168 92 aa12.45□□□□□ -0.42
CDC42SE2-209ENST00000506419 AKAP8O43823 692 aaKnown RBP12.45□□□□□ -0.42
CDC42SE2-209ENST00000506419 SERPINI2O75830 405 aa12.45□□□□□ -0.42
CDC42SE2-209ENST00000506419 PDE5AO76074 875 aa12.45□□□□□ -0.42
CDC42SE2-209ENST00000506419 MT-ATP6P00846 226 aa12.45□□□□□ -0.42
CDC42SE2-209ENST00000506419 ADORA3P0DMS8 318 aa12.45□□□□□ -0.42
CDC42SE2-209ENST00000506419 IGHV4-31P0DP07 118 aa12.45□□□□□ -0.42
CDC42SE2-209ENST00000506419 IFNGR1P15260 489 aa12.45□□□□□ -0.42
CDC42SE2-209ENST00000506419 USF1P22415 310 aaPredicted RBP12.45□□□□□ -0.42
CDC42SE2-209ENST00000506419 CAPZA2P47755 286 aa12.45□□□□□ -0.42
CDC42SE2-209ENST00000506419 SNRPD2P62316 118 aaKnown RBP12.45□□□□□ -0.42
CDC42SE2-209ENST00000506419 NPRL3Q12980 569 aa12.45□□□□□ -0.42
CDC42SE2-209ENST00000506419 C6orf52Q5T4I8 152 aa12.45□□□□□ -0.42
CDC42SE2-209ENST00000506419 LRFN4Q6PJG9 635 aa12.45□□□□□ -0.42
CDC42SE2-209ENST00000506419 ZNF813Q6ZN06 617 aa12.45□□□□□ -0.42
CDC42SE2-209ENST00000506419 CCDC36Q8IYA8 594 aa12.45□□□□□ -0.42
CDC42SE2-209ENST00000506419 ADAMTS16Q8TE57 1224 aa12.45□□□□□ -0.42
CDC42SE2-209ENST00000506419 TMEM54Q969K7 222 aa12.45□□□□□ -0.42
CDC42SE2-209ENST00000506419 LRRC58Q96CX6 371 aa12.45□□□□□ -0.42
CDC42SE2-209ENST00000506419 ZNF583Q96ND8 569 aa12.45□□□□□ -0.42
CDC42SE2-209ENST00000506419 SIKE1Q9BRV8 207 aa12.45□□□□□ -0.42
CDC42SE2-209ENST00000506419 ZNF426Q9BUY5 554 aa12.45□□□□□ -0.42
CDC42SE2-209ENST00000506419 PCDHAC1Q9H158 963 aa12.45□□□□□ -0.42
CDC42SE2-209ENST00000506419 MEPEQ9NQ76 525 aaPredicted RBP12.45□□□□□ -0.42
CDC42SE2-209ENST00000506419 SLC7A7Q9UM01 511 aa12.45□□□□□ -0.42
CDC42SE2-209ENST00000506419 POFUT2Q9Y2G5 429 aa12.45□□□□□ -0.42
CDC42SE2-209ENST00000506419 TRAPPC13A5PLN9 417 aa12.44□□□□□ -0.42
CDC42SE2-209ENST00000506419 PATE4P0C8F1 98 aa12.44□□□□□ -0.42
CDC42SE2-209ENST00000506419 CD79AP11912 226 aa12.44□□□□□ -0.42
CDC42SE2-209ENST00000506419 ZNF35P13682 527 aa12.44□□□□□ -0.42
CDC42SE2-209ENST00000506419 ZNF14P17017 642 aaPredicted RBP12.44□□□□□ -0.42
CDC42SE2-209ENST00000506419 TNFRSF1BP20333 461 aa12.44□□□□□ -0.42
CDC42SE2-209ENST00000506419 NPR2P20594 1047 aa12.44□□□□□ -0.42
CDC42SE2-209ENST00000506419 NR4A2P43354 598 aa12.44□□□□□ -0.42
CDC42SE2-209ENST00000506419 PDLIM4P50479 330 aa12.44□□□□□ -0.42
CDC42SE2-209ENST00000506419 BIDP55957 195 aa12.44□□□□□ -0.42
CDC42SE2-209ENST00000506419 LSM11P83369 360 aaKnown RBP eCLIP12.44□□□□□ -0.42
CDC42SE2-209ENST00000506419 KLF10Q13118 480 aa12.44□□□□□ -0.42
CDC42SE2-209ENST00000506419 CYLC2Q14093 348 aaPredicted RBP12.44□□□□□ -0.42
CDC42SE2-209ENST00000506419 TTC33Q6PID6 262 aaPredicted RBP12.44□□□□□ -0.42
CDC42SE2-209ENST00000506419 SLC35D2Q76EJ3 337 aa12.44□□□□□ -0.42
CDC42SE2-209ENST00000506419 SLC30A8Q8IWU4 369 aa12.44□□□□□ -0.42
CDC42SE2-209ENST00000506419 SKA3Q8IX90 412 aa12.44□□□□□ -0.42
CDC42SE2-209ENST00000506419 SVOPLQ8N434 492 aa12.44□□□□□ -0.42
CDC42SE2-209ENST00000506419 IL17RDQ8NFM7 739 aa12.44□□□□□ -0.42
CDC42SE2-209ENST00000506419 OR6N1Q8NGY5 312 aa12.44□□□□□ -0.42
CDC42SE2-209ENST00000506419 ZNF442Q9H7R0 627 aa12.44□□□□□ -0.42
CDC42SE2-209ENST00000506419 MOV10Q9HCE1 1003 aaKnown RBP12.44□□□□□ -0.42
CDC42SE2-209ENST00000506419 SAR1AQ9NR31 198 aa12.44□□□□□ -0.42
CDC42SE2-209ENST00000506419 MXRA5Q9NR99 2828 aa12.44□□□□□ -0.42
CDC42SE2-209ENST00000506419 IGHV4-61A0A0C4DH41 118 aa12.43□□□□□ -0.42
CDC42SE2-209ENST00000506419 LOC100653049A0A140TA62 436 aa12.43□□□□□ -0.42
CDC42SE2-209ENST00000506419 hCG_2039718K7EN88 272 aa12.43□□□□□ -0.42
CDC42SE2-209ENST00000506419 KPNA4O00629 521 aaPredicted RBP12.43□□□□□ -0.42
CDC42SE2-209ENST00000506419 KRT34O76011 436 aa12.43□□□□□ -0.42
CDC42SE2-209ENST00000506419 CSF3P09919 207 aa12.43□□□□□ -0.42
CDC42SE2-209ENST00000506419 ASAH2BP0C7U1 165 aa12.43□□□□□ -0.42
CDC42SE2-209ENST00000506419 B4GALT1P15291 398 aa12.43□□□□□ -0.42
CDC42SE2-209ENST00000506419 NR4A1P22736 598 aa12.43□□□□□ -0.42
CDC42SE2-209ENST00000506419 RAB1AP62820 205 aa12.43□□□□□ -0.42
CDC42SE2-209ENST00000506419 RUNX1T1Q06455 604 aa12.43□□□□□ -0.42
CDC42SE2-209ENST00000506419 TRMT5Q32P41 509 aaKnown RBP12.43□□□□□ -0.42
CDC42SE2-209ENST00000506419 CYB5R2Q6BCY4 276 aa12.43□□□□□ -0.42
CDC42SE2-209ENST00000506419 KRT80Q6KB66 452 aa12.43□□□□□ -0.42
CDC42SE2-209ENST00000506419 SLC46A3Q7Z3Q1 461 aa12.43□□□□□ -0.42
CDC42SE2-209ENST00000506419 SPATA21Q7Z572 469 aa12.43□□□□□ -0.42
CDC42SE2-209ENST00000506419 CARM1Q86X55 608 aa12.43□□□□□ -0.42
CDC42SE2-209ENST00000506419 NKAIN4Q8IVV8 208 aa12.43□□□□□ -0.42
CDC42SE2-209ENST00000506419 ARIH2OSQ8N7S6 290 aa12.43□□□□□ -0.42
CDC42SE2-209ENST00000506419 OR6X1Q8NH79 312 aa12.43□□□□□ -0.42
CDC42SE2-209ENST00000506419 MPP4Q96JB8 637 aa12.43□□□□□ -0.42
CDC42SE2-209ENST00000506419 FOXB1Q99853 325 aa12.43□□□□□ -0.42
CDC42SE2-209ENST00000506419 ULBP2Q9BZM5 246 aa12.43□□□□□ -0.42
CDC42SE2-209ENST00000506419 NANSQ9NR45 359 aa12.43□□□□□ -0.42
CDC42SE2-209ENST00000506419 ARGLU1Q9NWB6 273 aaPredicted RBP12.43□□□□□ -0.42
CDC42SE2-209ENST00000506419 GLTPQ9NZD2 209 aa12.43□□□□□ -0.42
CDC42SE2-209ENST00000506419 CHD3Q12873 2000 aaKnown RBP12.42□□□□□ -0.42
CDC42SE2-209ENST00000506419 SH3PXD2BA1X283 911 aa12.42□□□□□ -0.42
CDC42SE2-209ENST00000506419 SHOX2O60902 331 aaPredicted RBP12.42□□□□□ -0.42
CDC42SE2-209ENST00000506419 OR6A2O95222 327 aa12.42□□□□□ -0.42
CDC42SE2-209ENST00000506419 STAMBPO95630 424 aa12.42□□□□□ -0.42
CDC42SE2-209ENST00000506419 CSNK1A1P48729 337 aa12.42□□□□□ -0.42
CDC42SE2-209ENST00000506419 PPOXP50336 477 aa12.42□□□□□ -0.42
CDC42SE2-209ENST00000506419 ARFIP2P53365 341 aa12.42□□□□□ -0.42
CDC42SE2-209ENST00000506419 DAG1Q14118 895 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms