RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 ZNF587Q96SQ5 575 aaPredicted RBP9.11□□□□□ -0.95
NR1I3-222ENST00000506018 KATNB1Q9BVA0 655 aa9.11□□□□□ -0.95
NR1I3-222ENST00000506018 CD300AQ9UGN4 299 aa9.11□□□□□ -0.95
NR1I3-222ENST00000506018 GDF2Q9UK05 429 aaPredicted RBP9.11□□□□□ -0.95
NR1I3-222ENST00000506018 MOKQ9UQ07 419 aa9.11□□□□□ -0.95
NR1I3-222ENST00000506018 FKBP7Q9Y680 259 aa9.11□□□□□ -0.95
NR1I3-222ENST00000506018 ARFGEF3Q5TH69 2177 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 FN1P02751 2386 aaKnown RBP9.1□□□□□ -0.95
NR1I3-222ENST00000506018 A0A0B4J2E0 115 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 LOC102725191A0A1B0GVB3 256 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 A0A1B0GX12 115 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 ZNF726A6NNF4 738 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 INAFM1C9JVW0 142 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 ATP6V1G2-DDX39BF2Z307 99 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 TLX2O43763 284 aaPredicted RBP9.1□□□□□ -0.95
NR1I3-222ENST00000506018 FMO6PO60774 539 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 FZD7O75084 574 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 UPK3AO75631 287 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 MFN2O95140 757 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 OR6A2O95222 327 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 MT-ATP6P00846 226 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 SLC25A16P16260 332 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 HOXB6P17509 224 aaKnown RBP9.1□□□□□ -0.95
NR1I3-222ENST00000506018 TCN1P20061 433 aaPredicted RBP9.1□□□□□ -0.95
NR1I3-222ENST00000506018 PTNP21246 168 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 HTR2AP28223 471 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 CAPZA2P47755 286 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 PMS2P3Q13401 168 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 VMACQ2NL98 169 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 C1orf146Q5VVC0 180 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 C11orf71Q6IPW1 123 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 ZNF613Q6PF04 617 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 DHFR2Q86XF0 187 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 CALHM3Q86XJ0 350 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 KDM8Q8N371 416 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 RNF148Q8N7C7 305 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 FAM169BQ8N8A8 192 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 SMYD1Q8NB12 490 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 OR4F15Q8NGB8 312 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 BCL2L2Q92843 193 aaPredicted RBP9.1□□□□□ -0.95
NR1I3-222ENST00000506018 MCHR1Q99705 422 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 TMEM43Q9BTV4 400 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 IKZF5Q9H5V7 419 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 ACTR3BQ9P1U1 418 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 NOX1Q9Y5S8 564 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 SNX13Q9Y5W8 968 aa9.1□□□□□ -0.95
NR1I3-222ENST00000506018 A0A096LPE4 126 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 A0A1W2PPZ6 126 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 ZNF99A8MXY4 864 aaPredicted RBP9.09□□□□□ -0.95
NR1I3-222ENST00000506018 M0QX08 132 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 CHP2O43745 196 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 TPST1O60507 370 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 NDUFS7O75251 213 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 ENTPD5O75356 428 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 PDE5AO76074 875 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 ERCC1P07992 297 aaPredicted RBP9.09□□□□□ -0.95
NR1I3-222ENST00000506018 CBLP22681 906 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 AHCYP23526 432 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 PCGF2P35227 344 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 ARR3P36575 388 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 EFNA4P52798 201 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 POU3F1Q03052 451 aaPredicted RBP9.09□□□□□ -0.95
NR1I3-222ENST00000506018 PUDPQ08623 228 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 SELPLGQ14242 412 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 FLOT2Q14254 428 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 ADRM1Q16186 407 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 CEACAM16Q2WEN9 425 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 GLIPR1L2Q4G1C9 344 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 GLYATQ6IB77 296 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 TTC33Q6PID6 262 aaPredicted RBP9.09□□□□□ -0.95
NR1I3-222ENST00000506018 B3GLCTQ6Y288 498 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 DNM1P46Q6ZS02 220 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 C10orf111Q8N326 155 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 IL17RDQ8NFM7 739 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 NANOS1Q8WY41 292 aaKnown RBP9.09□□□□□ -0.95
NR1I3-222ENST00000506018 LZICQ8WZA0 190 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 FAM168AQ92567 244 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 CCDC124Q96CT7 223 aaKnown RBP9.09□□□□□ -0.95
NR1I3-222ENST00000506018 FBXO17Q96EF6 278 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 CLPTM1LQ96KA5 538 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 LRR1Q96L50 414 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 NSMCE2Q96MF7 247 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 GORASP2Q9H8Y8 452 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 CRLF2Q9HC73 371 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 GPR35Q9HC97 309 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 MYOZ1Q9NP98 299 aaPredicted RBP9.09□□□□□ -0.95
NR1I3-222ENST00000506018 MRPL39Q9NYK5 338 aaKnown RBP9.09□□□□□ -0.95
NR1I3-222ENST00000506018 B3GAT1Q9P2W7 334 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 CRNNQ9UBG3 495 aaPredicted RBP9.09□□□□□ -0.95
NR1I3-222ENST00000506018 SLC7A8Q9UHI5 535 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 USP22Q9UPT9 525 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 POMPQ9Y244 141 aa9.09□□□□□ -0.95
NR1I3-222ENST00000506018 ZANQ9Y493 2812 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 JMJD1CQ15652 2540 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 IGKV1D-42A0A075B6H8 117 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 IGHV1-18A0A0C4DH31 117 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 AQP12BA6NM10 295 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 B9A039 149 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 M0R3G1 203 aa9.08□□□□□ -0.96
NR1I3-222ENST00000506018 CXCR6O00574 342 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms