RNA–Protein interactions for RNA: ENST00000504647.1

CUL9-208, Transcript of cullin 9, human

TSL 2

Gene CUL9, Length 567 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CUL9-208	ENST00000504647	THBS4	P35443	961 aa		13.62	□□□□□ -0.23
CUL9-208	ENST00000504647	PDLIM4	P50479	330 aa		13.62	□□□□□ -0.23
CUL9-208	ENST00000504647	GZMM	P51124	257 aa		13.62	□□□□□ -0.23
CUL9-208	ENST00000504647	VMAC	Q2NL98	169 aa		13.62	□□□□□ -0.23
CUL9-208	ENST00000504647	TRMT5	Q32P41	509 aa	Known RBP	13.62	□□□□□ -0.23
CUL9-208	ENST00000504647	INTS11	Q5TA45	600 aa	Known RBP	13.62	□□□□□ -0.23
CUL9-208	ENST00000504647	ZNF813	Q6ZN06	617 aa		13.62	□□□□□ -0.23
CUL9-208	ENST00000504647	TSPYL5	Q86VY4	417 aa	Predicted RBP	13.62	□□□□□ -0.23
CUL9-208	ENST00000504647	SLC26A7	Q8TE54	656 aa		13.62	□□□□□ -0.23
CUL9-208	ENST00000504647	TMEM120A	Q9BXJ8	343 aa		13.62	□□□□□ -0.23
CUL9-208	ENST00000504647	ZNF442	Q9H7R0	627 aa		13.62	□□□□□ -0.23
CUL9-208	ENST00000504647	NOX3	Q9HBY0	568 aa		13.62	□□□□□ -0.23
CUL9-208	ENST00000504647	B3GNT2	Q9NY97	397 aa		13.62	□□□□□ -0.23
CUL9-208	ENST00000504647	SLC7A7	Q9UM01	511 aa		13.62	□□□□□ -0.23
CUL9-208	ENST00000504647	POFUT2	Q9Y2G5	429 aa		13.62	□□□□□ -0.23
CUL9-208	ENST00000504647	TRAPPC13	A5PLN9	417 aa		13.61	□□□□□ -0.23
CUL9-208	ENST00000504647	VWC2L	B2RUY7	222 aa		13.61	□□□□□ -0.23
CUL9-208	ENST00000504647	NDUFS8	O00217	210 aa		13.61	□□□□□ -0.23
CUL9-208	ENST00000504647	OR6A2	O95222	327 aa		13.61	□□□□□ -0.23
CUL9-208	ENST00000504647	CH25H	O95992	272 aa		13.61	□□□□□ -0.23
CUL9-208	ENST00000504647	CD79A	P11912	226 aa		13.61	□□□□□ -0.23
CUL9-208	ENST00000504647	IFNGR1	P15260	489 aa		13.61	□□□□□ -0.23
CUL9-208	ENST00000504647	B4GALT1	P15291	398 aa		13.61	□□□□□ -0.23
CUL9-208	ENST00000504647	NPR2	P20594	1047 aa		13.61	□□□□□ -0.23
CUL9-208	ENST00000504647	PPOX	P50336	477 aa		13.61	□□□□□ -0.23
CUL9-208	ENST00000504647	CRYBA2	P53672	197 aa		13.61	□□□□□ -0.23
CUL9-208	ENST00000504647	BID	P55957	195 aa		13.61	□□□□□ -0.23
CUL9-208	ENST00000504647	CYLC2	Q14093	348 aa	Predicted RBP	13.61	□□□□□ -0.23
CUL9-208	ENST00000504647	CARTPT	Q16568	116 aa		13.61	□□□□□ -0.23
CUL9-208	ENST00000504647	ZNF74	Q16587	644 aa		13.61	□□□□□ -0.23
CUL9-208	ENST00000504647	RABL3	Q5HYI8	236 aa		13.61	□□□□□ -0.23
CUL9-208	ENST00000504647	NANOGP8	Q6NSW7	305 aa		13.61	□□□□□ -0.23
CUL9-208	ENST00000504647	TTC33	Q6PID6	262 aa	Predicted RBP	13.61	□□□□□ -0.23
CUL9-208	ENST00000504647	ZNF627	Q7L945	461 aa		13.61	□□□□□ -0.23
CUL9-208	ENST00000504647	IL17RD	Q8NFM7	739 aa		13.61	□□□□□ -0.23
CUL9-208	ENST00000504647	FOXB1	Q99853	325 aa		13.61	□□□□□ -0.23
CUL9-208	ENST00000504647	PCDHAC1	Q9H158	963 aa		13.61	□□□□□ -0.23
CUL9-208	ENST00000504647	NANOG	Q9H9S0	305 aa		13.61	□□□□□ -0.23
CUL9-208	ENST00000504647	VSTM5	A8MXK1	200 aa		13.6	□□□□□ -0.23
CUL9-208	ENST00000504647	hCG_2039718	K7EN88	272 aa		13.6	□□□□□ -0.23
CUL9-208	ENST00000504647	KPNA4	O00629	521 aa	Predicted RBP	13.6	□□□□□ -0.23
CUL9-208	ENST00000504647	IGHV4-31	P0DP07	118 aa		13.6	□□□□□ -0.23
CUL9-208	ENST00000504647	NR4A2	P43354	598 aa		13.6	□□□□□ -0.23
CUL9-208	ENST00000504647	CSNK1A1	P48729	337 aa		13.6	□□□□□ -0.23
CUL9-208	ENST00000504647	LSM11	P83369	360 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
CUL9-208	ENST00000504647	PIGF	Q07326	219 aa		13.6	□□□□□ -0.23
CUL9-208	ENST00000504647	SNTB2	Q13425	540 aa	Known RBP	13.6	□□□□□ -0.23
CUL9-208	ENST00000504647	DAG1	Q14118	895 aa		13.6	□□□□□ -0.23
CUL9-208	ENST00000504647	GGTLC2	Q14390	218 aa		13.6	□□□□□ -0.23
CUL9-208	ENST00000504647	GSG1	Q2KHT4	349 aa		13.6	□□□□□ -0.23
CUL9-208	ENST00000504647	CHRFAM7A	Q494W8	412 aa		13.6	□□□□□ -0.23
CUL9-208	ENST00000504647	KRT80	Q6KB66	452 aa		13.6	□□□□□ -0.23
CUL9-208	ENST00000504647	SLC35D2	Q76EJ3	337 aa		13.6	□□□□□ -0.23
CUL9-208	ENST00000504647	CCDC80	Q76M96	950 aa		13.6	□□□□□ -0.23
CUL9-208	ENST00000504647	SPATA21	Q7Z572	469 aa		13.6	□□□□□ -0.23
CUL9-208	ENST00000504647	SNX32	Q86XE0	403 aa		13.6	□□□□□ -0.23
CUL9-208	ENST00000504647	SVOPL	Q8N434	492 aa		13.6	□□□□□ -0.23
CUL9-208	ENST00000504647	LRRC17	Q8N6Y2	441 aa		13.6	□□□□□ -0.23
CUL9-208	ENST00000504647	RASSF5	Q8WWW0	418 aa		13.6	□□□□□ -0.23
CUL9-208	ENST00000504647	MS4A3	Q96HJ5	214 aa		13.6	□□□□□ -0.23
CUL9-208	ENST00000504647	MPP4	Q96JB8	637 aa		13.6	□□□□□ -0.23
CUL9-208	ENST00000504647	FOXN4	Q96NZ1	517 aa		13.6	□□□□□ -0.23
CUL9-208	ENST00000504647	DOK1	Q99704	481 aa		13.6	□□□□□ -0.23
CUL9-208	ENST00000504647	PIMREG	Q9BSJ6	248 aa		13.6	□□□□□ -0.23
CUL9-208	ENST00000504647	ZNF426	Q9BUY5	554 aa		13.6	□□□□□ -0.23
CUL9-208	ENST00000504647	MYOZ1	Q9NP98	299 aa	Predicted RBP	13.6	□□□□□ -0.23
CUL9-208	ENST00000504647	NANS	Q9NR45	359 aa		13.6	□□□□□ -0.23
CUL9-208	ENST00000504647	TAS2R5	Q9NYW4	299 aa		13.6	□□□□□ -0.23
CUL9-208	ENST00000504647	ATR	Q13535	2644 aa		13.59	□□□□□ -0.23
CUL9-208	ENST00000504647	LOC390937	A0A1W2PQ73	354 aa		13.59	□□□□□ -0.23
CUL9-208	ENST00000504647	TMEM129	A0AVI4	362 aa		13.59	□□□□□ -0.23
CUL9-208	ENST00000504647	FXYD1	O00168	92 aa		13.59	□□□□□ -0.23
CUL9-208	ENST00000504647	TROVE2	P10155	538 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
CUL9-208	ENST00000504647	ZNF16	P17020	682 aa	Predicted RBP	13.59	□□□□□ -0.23
CUL9-208	ENST00000504647	ZP4	Q12836	540 aa		13.59	□□□□□ -0.23
CUL9-208	ENST00000504647	SF3A3	Q12874	501 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
CUL9-208	ENST00000504647	MMEL1	Q495T6	779 aa		13.59	□□□□□ -0.23
CUL9-208	ENST00000504647	CYB5R2	Q6BCY4	276 aa		13.59	□□□□□ -0.23
CUL9-208	ENST00000504647	CALHM3	Q86XJ0	350 aa		13.59	□□□□□ -0.23
CUL9-208	ENST00000504647	OR6X1	Q8NH79	312 aa		13.59	□□□□□ -0.23
CUL9-208	ENST00000504647	TMEM54	Q969K7	222 aa		13.59	□□□□□ -0.23
CUL9-208	ENST00000504647	LRRC58	Q96CX6	371 aa		13.59	□□□□□ -0.23
CUL9-208	ENST00000504647	ZNF75A	Q96N20	296 aa		13.59	□□□□□ -0.23
CUL9-208	ENST00000504647	KCNK17	Q96T54	332 aa		13.59	□□□□□ -0.23
CUL9-208	ENST00000504647	SH3GL1	Q99961	368 aa		13.59	□□□□□ -0.23
CUL9-208	ENST00000504647	ECSIT	Q9BQ95	431 aa		13.59	□□□□□ -0.23
CUL9-208	ENST00000504647	PRSS27	Q9BQR3	290 aa		13.59	□□□□□ -0.23
CUL9-208	ENST00000504647	SLC19A3	Q9BZV2	496 aa		13.59	□□□□□ -0.23
CUL9-208	ENST00000504647	RAB1B	Q9H0U4	201 aa		13.59	□□□□□ -0.23
CUL9-208	ENST00000504647	ZNF224	Q9NZL3	707 aa		13.59	□□□□□ -0.23
CUL9-208	ENST00000504647	ZNF229	Q9UJW7	825 aa		13.59	□□□□□ -0.23
CUL9-208	ENST00000504647	FBXO9	Q9UK97	447 aa	Predicted RBP	13.59	□□□□□ -0.23
CUL9-208	ENST00000504647	SH3GLB1	Q9Y371	365 aa		13.59	□□□□□ -0.23
CUL9-208	ENST00000504647	SH3PXD2B	A1X283	911 aa		13.58	□□□□□ -0.24
CUL9-208	ENST00000504647	MRAS	O14807	208 aa		13.58	□□□□□ -0.24
CUL9-208	ENST00000504647	RNF13	O43567	381 aa		13.58	□□□□□ -0.24
CUL9-208	ENST00000504647	HIST1H2AB	P04908	130 aa		13.58	□□□□□ -0.24
CUL9-208	ENST00000504647	ASAH2B	P0C7U1	165 aa		13.58	□□□□□ -0.24
CUL9-208	ENST00000504647	UMPS	P11172	480 aa		13.58	□□□□□ -0.24
CUL9-208	ENST00000504647	ZNF14	P17017	642 aa	Predicted RBP	13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms