RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 GP6Q9HCN6 339 aa18.12■□□□□ 0.49
CDC42SE2-206ENST00000503291 GLRX2Q9NS18 164 aa18.12■□□□□ 0.49
CDC42SE2-206ENST00000503291 POLEQ07864 2286 aa18.12■□□□□ 0.49
CDC42SE2-206ENST00000503291 SURF4O15260 269 aa18.11■□□□□ 0.49
CDC42SE2-206ENST00000503291 TOXO94900 526 aa18.11■□□□□ 0.49
CDC42SE2-206ENST00000503291 SLC2A10O95528 541 aa18.11■□□□□ 0.49
CDC42SE2-206ENST00000503291 GNAO1P09471 354 aa18.11■□□□□ 0.49
CDC42SE2-206ENST00000503291 RUNX1T1Q06455 604 aa18.11■□□□□ 0.49
CDC42SE2-206ENST00000503291 SNAPC1Q16533 368 aa18.11■□□□□ 0.49
CDC42SE2-206ENST00000503291 OR2A2Q6IF42 318 aa18.11■□□□□ 0.49
CDC42SE2-206ENST00000503291 OR52E2Q8NGJ4 325 aa18.11■□□□□ 0.49
CDC42SE2-206ENST00000503291 FAM81AQ8TBF8 368 aa18.11■□□□□ 0.49
CDC42SE2-206ENST00000503291 UBE2FQ969M7 185 aa18.11■□□□□ 0.49
CDC42SE2-206ENST00000503291 INTS12Q96CB8 462 aaKnown RBP18.11■□□□□ 0.49
CDC42SE2-206ENST00000503291 MUS81Q96NY9 551 aa18.11■□□□□ 0.49
CDC42SE2-206ENST00000503291 SLC38A2Q96QD8 506 aa18.11■□□□□ 0.49
CDC42SE2-206ENST00000503291 OSGIN2Q9Y236 505 aa18.11■□□□□ 0.49
CDC42SE2-206ENST00000503291 NOSIPQ9Y314 301 aaKnown RBP18.11■□□□□ 0.49
CDC42SE2-206ENST00000503291 ARHGAP21Q5T5U3 1957 aa18.11■□□□□ 0.49
CDC42SE2-206ENST00000503291 TRGV8A0A0C4DH27 118 aa18.11■□□□□ 0.49
CDC42SE2-206ENST00000503291 ZNF726A6NNF4 738 aa18.11■□□□□ 0.49
CDC42SE2-206ENST00000503291 ARHGEF9O43307 516 aa18.11■□□□□ 0.49
CDC42SE2-206ENST00000503291 TIMP3P35625 211 aa18.11■□□□□ 0.49
CDC42SE2-206ENST00000503291 CASP6P55212 293 aa18.11■□□□□ 0.49
CDC42SE2-206ENST00000503291 PER3P56645 1201 aa18.11■□□□□ 0.49
CDC42SE2-206ENST00000503291 CDC42P60953 191 aa18.11■□□□□ 0.49
CDC42SE2-206ENST00000503291 KRR1Q13601 381 aaKnown RBP18.11■□□□□ 0.49
CDC42SE2-206ENST00000503291 MESTQ5EB52 335 aa18.11■□□□□ 0.49
CDC42SE2-206ENST00000503291 OR6X1Q8NH79 312 aa18.11■□□□□ 0.49
CDC42SE2-206ENST00000503291 CMC2Q9NRP2 79 aa18.11■□□□□ 0.49
CDC42SE2-206ENST00000503291 RAB26Q9ULW5 256 aa18.11■□□□□ 0.49
CDC42SE2-206ENST00000503291 DOCK7Q96N67 2140 aa18.11■□□□□ 0.49
CDC42SE2-206ENST00000503291 M0R129 80 aa18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 XKRYO14609 159 aa18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 C1QL1O75973 258 aa18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 ZNF432O94892 652 aa18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 GLI4P10075 376 aa18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 CDKN2AP42771 156 aaKnown RBP18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 SELENOPP49908 381 aa18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 CAMK2DQ13557 499 aa18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 TMEM201Q5SNT2 666 aa18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 PTCHD4Q6ZW05 846 aa18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 ADAD1Q96M93 576 aaKnown RBP18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 NMNAT3Q96T66 252 aa18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 PRRG3Q9BZD7 231 aa18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 A6NIZ1 184 aa18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 PRKYO43930 277 aa18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 SS18L1O75177 396 aaPredicted RBP18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 IL2RAP01589 272 aa18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 ACADSP16219 412 aa18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 AGTR1P30556 359 aa18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 PCYT1AP49585 367 aa18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 RAP1BP61224 184 aa18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 RAP1AP62834 184 aa18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 EFNB1P98172 346 aa18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 IGFBP7Q16270 282 aa18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 ZNF691Q5VV52 312 aa18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 NIPAL3Q6P499 406 aa18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 AAED1Q7RTV5 226 aa18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 TCEANCQ8N8B7 351 aa18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 SDR9C7Q8NEX9 313 aa18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 HDAC2Q92769 488 aaKnown RBP18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 TMEM45BQ96B21 275 aa18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 SLC25A44Q96H78 314 aaPredicted RBP18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 PLEKHA8Q96JA3 519 aa18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 IL4I1Q96RQ9 567 aa18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 APOL4Q9BPW4 351 aa18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 IMPAD1Q9NX62 359 aa18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 GPR52Q9Y2T5 361 aa18.1■□□□□ 0.49
CDC42SE2-206ENST00000503291 RIIAD1A6NNX1 92 aa18.09■□□□□ 0.49
CDC42SE2-206ENST00000503291 MRPL33O75394 65 aaKnown RBP18.09■□□□□ 0.49
CDC42SE2-206ENST00000503291 TRMUO75648 421 aaKnown RBP18.09■□□□□ 0.49
CDC42SE2-206ENST00000503291 IFNGP01579 166 aa18.09■□□□□ 0.49
CDC42SE2-206ENST00000503291 CA7P43166 264 aa18.09■□□□□ 0.49
CDC42SE2-206ENST00000503291 PMPCAQ10713 525 aa18.09■□□□□ 0.49
CDC42SE2-206ENST00000503291 FOXF2Q12947 444 aa18.09■□□□□ 0.49
CDC42SE2-206ENST00000503291 GUSBP1Q15486 140 aa18.09■□□□□ 0.49
CDC42SE2-206ENST00000503291 CARD17Q5XLA6 110 aa18.09■□□□□ 0.49
CDC42SE2-206ENST00000503291 FAM205BPQ63HN1 556 aa18.09■□□□□ 0.49
CDC42SE2-206ENST00000503291 USP51Q70EK9 711 aa18.09■□□□□ 0.49
CDC42SE2-206ENST00000503291 NUFIP2Q7Z417 695 aaKnown RBP18.09■□□□□ 0.49
CDC42SE2-206ENST00000503291 SYT14Q8NB59 555 aa18.09■□□□□ 0.49
CDC42SE2-206ENST00000503291 NPEPL1Q8NDH3 523 aa18.09■□□□□ 0.49
CDC42SE2-206ENST00000503291 OR2M2Q96R28 347 aa18.09■□□□□ 0.49
CDC42SE2-206ENST00000503291 MRPL13Q9BYD1 178 aaKnown RBP18.09■□□□□ 0.49
CDC42SE2-206ENST00000503291 PARPBPQ9NWS1 579 aa18.09■□□□□ 0.49
CDC42SE2-206ENST00000503291 KLHL21Q9UJP4 597 aa18.09■□□□□ 0.49
CDC42SE2-206ENST00000503291 RCE1Q9Y256 329 aa18.09■□□□□ 0.49
CDC42SE2-206ENST00000503291 TLX2O43763 284 aaPredicted RBP18.08■□□□□ 0.49
CDC42SE2-206ENST00000503291 AKAP8O43823 692 aaKnown RBP18.08■□□□□ 0.49
CDC42SE2-206ENST00000503291 STSP08842 583 aa18.08■□□□□ 0.49
CDC42SE2-206ENST00000503291 IL18R1Q13478 541 aa18.08■□□□□ 0.49
CDC42SE2-206ENST00000503291 CRMP1Q14194 572 aa18.08■□□□□ 0.49
CDC42SE2-206ENST00000503291 FAM214BQ7L5A3 538 aa18.08■□□□□ 0.49
CDC42SE2-206ENST00000503291 HDDC2Q7Z4H3 204 aa18.08■□□□□ 0.49
CDC42SE2-206ENST00000503291 ADCK1Q86TW2 530 aa18.08■□□□□ 0.49
CDC42SE2-206ENST00000503291 JAZF1Q86VZ6 243 aa18.08■□□□□ 0.49
CDC42SE2-206ENST00000503291 DEPDC4Q8N2C3 294 aa18.08■□□□□ 0.49
CDC42SE2-206ENST00000503291 MARVELD2Q8N4S9 558 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms