RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 TADA1Q96BN2 335 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 CCDC127Q96BQ5 260 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 IL12RB2Q99665 862 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 ATP5SQ99766 215 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 NEURL2Q9BR09 285 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 MED10Q9BTT4 135 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 MAP1LC3CQ9BXW4 147 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 CSTL1Q9H114 145 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 NHEJ1Q9H9Q4 299 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 ANKHQ9HCJ1 492 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 OR2S2Q9NQN1 319 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 SENP1Q9P0U3 644 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 TUBGCP4Q9UGJ1 667 aa3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 AK6Q9Y3D8 172 aaKnown RBP3.71□□□□□ -1.82
HMGB1P21-201ENST00000502313 MROH7Q68CQ1 1323 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 WDFY4Q6ZS81 3184 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 TCHHQ07283 1943 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 A0A087WZ39 114 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 IGKV6-21A0A0C4DH24 114 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 IGLV5-39A0A0G2JS06 123 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 TMEM210A6NLX4 147 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 M0QZ92 97 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 SIGLEC5O15389 551 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 OR10H3O60404 316 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 SLC19A2O60779 497 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 SC5DO75845 299 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 OAZ2O95190 189 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 IGHG3P01860 377 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 LGALS2P05162 132 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 UMODP07911 640 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 HBQ1P09105 142 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 FGF3P11487 239 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 HTR2CP28335 458 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 CD38P28907 300 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 PRDX3P30048 256 aaKnown RBP3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 FEN1P39748 380 aaKnown RBP3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 P2RY2P41231 377 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 UCNP55089 124 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 MLLT10P55197 1068 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 SARNPP82979 210 aaKnown RBP3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 TNXAQ16473 311 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 MS4A18Q3C1V0 323 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 ODF3L2Q3SX64 289 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 PTPN20Q4JDL3 420 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 KLHL22Q53GT1 634 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 SAMD4BQ5PRF9 694 aaKnown RBP3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 STUMQ69YW2 141 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 ARMCX5Q6P1M9 558 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 GFRALQ6UXV0 394 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 HSD11B1LQ7Z5J1 315 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 TMEM219Q86XT9 240 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 ZNF677Q86XU0 584 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 METTL13Q8N6R0 699 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 SLC37A3Q8NCC5 494 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 ZNF248Q8NDW4 579 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 KBTBD8Q8NFY9 601 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 OR4D9Q8NGE8 314 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 OR56A4Q8NGH8 313 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 C16orf52Q8NHV5 167 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 FANK1Q8TC84 345 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 PHOSPHO2Q8TCD6 241 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 SMAP2Q8WU79 429 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 ISOC2Q96AB3 205 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 ECHDC3Q96DC8 303 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 URB1-AS1Q96HZ7 61 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 JSRP1Q96MG2 331 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 CPXM1Q96SM3 734 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 SLC30A2Q9BRI3 323 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 C9orf16Q9BUW7 83 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 UCK2Q9BZX2 261 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 NAA50Q9GZZ1 169 aaKnown RBP3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 RBM38Q9H0Z9 239 aaKnown RBP3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 SLITRK2Q9H156 845 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 GLIPR2Q9H4G4 154 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 APOBEC3GQ9HC16 384 aaKnown RBP3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 DMAP1Q9NPF5 467 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 DMAC2Q9NW81 257 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 BFARQ9NZS9 450 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 RCOR3Q9P2K3 495 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 NAGKQ9UJ70 344 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 NXT1Q9UKK6 140 aaKnown RBP3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 EIF3LQ9Y262 564 aaKnown RBP3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 PPP2R2CQ9Y2T4 447 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 TSSC4Q9Y5U2 329 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 PTGDR2Q9Y5Y4 395 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 COX11Q9Y6N1 276 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 TANC1Q9C0D5 1861 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 MYH6P13533 1939 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 PTPRSQ13332 1948 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 NRCAMQ92823 1304 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 IGSF9BQ9UPX0 1349 aa3.7□□□□□ -1.82
HMGB1P21-201ENST00000502313 NSG1A0A0A6YYJ2 146 aa3.69□□□□□ -1.82
HMGB1P21-201ENST00000502313 OR5H15A6NDH6 313 aa3.69□□□□□ -1.82
HMGB1P21-201ENST00000502313 FABP12A6NFH5 140 aa3.69□□□□□ -1.82
HMGB1P21-201ENST00000502313 MGAT4DA6NG13 374 aa3.69□□□□□ -1.82
HMGB1P21-201ENST00000502313 RNASEK-C17orf49H0YIS7 233 aa3.69□□□□□ -1.82
HMGB1P21-201ENST00000502313 PPIHO43447 177 aaKnown RBP3.69□□□□□ -1.82
HMGB1P21-201ENST00000502313 ATP8B1O43520 1251 aa3.69□□□□□ -1.82
HMGB1P21-201ENST00000502313 XRCC2O43543 280 aa3.69□□□□□ -1.82
HMGB1P21-201ENST00000502313 XPNPEP2O43895 674 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms